Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
---|---|
Accession | NC_008600 |
Length | 5,257,091 |
Click here to switch to the map view.
The map label for this gene is treP [H]
Identifier: 118476313
GI number: 118476313
Start: 659118
End: 660545
Strand: Direct
Name: treP [H]
Synonym: BALH_0568
Alternate gene names: 118476313
Gene position: 659118-660545 (Clockwise)
Preceding gene: 118476312
Following gene: 118476314
Centisome position: 12.54
GC content: 38.17
Gene sequence:
>1428_bases ATGGGGAAAGACTATCGTAAAACAGCAGAGGAAGTGTTGCAGTATATTGGTGGGAAAGACAATATTGAACAAGCTGCGCA CTGTGTAACGAGACTCCGTATCGCTTTAAAAGATGAAAGTAAAATAGATAACGATAAATTACAGTCTGTTTCATTAGTAA AGGGAGCGTTTCATAACGCTGGGGTATTTCAAATTGTAATTGGTCCAGGAGATGTGGATCGAGTATATGCCGAATTGATA ACGCTTGCAGGTATGAAGGAAGCGACAGTAGCTGACGTAAAAGATTCCGGAAACCAAAAGTTAAATCCAGCTCAAAAGTT TGTAAAAGTATTTTCAGATGTATTTATGCCGATATTACCAGCAATCGTAACAGCTGGTTTACTAATGGGTATTAACAATC TATTAGGCGCAAAGGACTTATTTTTTGATGGGAAAAATTTATTAGATGTGTATCCAAACTTAGGCGGGCTTTGGGATTTA ATTAATATGATGGCGAATACAGCATTCGTATTCTTACCGGCACTTGTCGGGTGGTCAGCAACGAAGCGTTTTGGTGGTAG TCCAATACTAGGGATTGTTATGGGATTAATGCTTGTGCACCCGGCCTTATTAAACGCGTGGGATTACGGAAAAGCAGCGA CTGGTTTAGACGGACAAAAGATTGAGTACTTCGATATTTTAGGATTATTTCAAATTGAAAAGGTAGGGTATCAAGGTCAA ATCTTACCGGTTTTAGTAGCGGCATTTGTATTAAGTAAAGTGGAAATTTTCTTGAAGAAACATGTACCAAATGCAATTCA ACTACTAGTTGTACCAATTACAACGATTGTCGTAACAGGTGTATTAGCACTAGGAATTATTGGTCCAGTTACACGTCATA TTGGAGATTTATTAACAGCTGGCTTAGTAGGTGTATATGAAACAGTACCAGTAGTTGGTGCAGTATTGTTTGGAGCATTA TATGCACCGCTTGTCATTACAGGTATGCATCATATGTTTATTGCTATCGACTTACAATTAATTGCACAGCACGGTGGTAC ATTCATTTGGCCAATGATTGCCCTTTCTAATATTGCGCAAGGTAGTGCGGCACTTGCAATGTTCTGGGTTTCTAAAAATC AAAATGATAAAAGTATGGCATCTACATCAGCAATCTCAGCATATTTCGGTATTACAGAACCAGCTATGTTTGGTGTAAAC TTACGAAATAAATTCCCGTTCTATGCAGCGATTATAGGATCAGCTATTGCAGCTATATTTATTACGTTAAATGGTGTGTT AGCACCTGCTATCGGAATTGGTGGATTACCAGCATTTATTTCTATTATTCCGAAATCGATTCCGATGTTTATTGTCGGAA TGATTATCGCAGTGGTCATCCCATTCACGTTAACGTGGTTATTTGCAAAAAGAGTAAAACAGAAGTAG
Upstream 100 bases:
>100_bases AAAAATTGCAAACTTATATATACGAGTGTTGACTAACTTATATATACGAGTTAATATGTAATTGTAAACGGTATCAAAAA AAGAAAAGAGGGACGGGAAT
Downstream 100 bases:
>100_bases GAGGAAGTTGAACATGAAGGATTGGCATAAAAGTGTAGTTTATCAAATTTATCCGAAGAGCTTTAATAGCTATTACAATA AAGAAACCGGTGATATAAAA
Product: PTS system trehalose-specific transporter subunit IIBC
Products: NA
Alternate protein names: EIIBC-Tre; EII-Tre; Trehalose-specific phosphotransferase enzyme IIB component; PTS system trehalose-specific EIIB component; Trehalose permease IIC component; PTS system trehalose-specific EIIC component [H]
Number of amino acids: Translated: 475; Mature: 474
Protein sequence:
>475_residues MGKDYRKTAEEVLQYIGGKDNIEQAAHCVTRLRIALKDESKIDNDKLQSVSLVKGAFHNAGVFQIVIGPGDVDRVYAELI TLAGMKEATVADVKDSGNQKLNPAQKFVKVFSDVFMPILPAIVTAGLLMGINNLLGAKDLFFDGKNLLDVYPNLGGLWDL INMMANTAFVFLPALVGWSATKRFGGSPILGIVMGLMLVHPALLNAWDYGKAATGLDGQKIEYFDILGLFQIEKVGYQGQ ILPVLVAAFVLSKVEIFLKKHVPNAIQLLVVPITTIVVTGVLALGIIGPVTRHIGDLLTAGLVGVYETVPVVGAVLFGAL YAPLVITGMHHMFIAIDLQLIAQHGGTFIWPMIALSNIAQGSAALAMFWVSKNQNDKSMASTSAISAYFGITEPAMFGVN LRNKFPFYAAIIGSAIAAIFITLNGVLAPAIGIGGLPAFISIIPKSIPMFIVGMIIAVVIPFTLTWLFAKRVKQK
Sequences:
>Translated_475_residues MGKDYRKTAEEVLQYIGGKDNIEQAAHCVTRLRIALKDESKIDNDKLQSVSLVKGAFHNAGVFQIVIGPGDVDRVYAELI TLAGMKEATVADVKDSGNQKLNPAQKFVKVFSDVFMPILPAIVTAGLLMGINNLLGAKDLFFDGKNLLDVYPNLGGLWDL INMMANTAFVFLPALVGWSATKRFGGSPILGIVMGLMLVHPALLNAWDYGKAATGLDGQKIEYFDILGLFQIEKVGYQGQ ILPVLVAAFVLSKVEIFLKKHVPNAIQLLVVPITTIVVTGVLALGIIGPVTRHIGDLLTAGLVGVYETVPVVGAVLFGAL YAPLVITGMHHMFIAIDLQLIAQHGGTFIWPMIALSNIAQGSAALAMFWVSKNQNDKSMASTSAISAYFGITEPAMFGVN LRNKFPFYAAIIGSAIAAIFITLNGVLAPAIGIGGLPAFISIIPKSIPMFIVGMIIAVVIPFTLTWLFAKRVKQK >Mature_474_residues GKDYRKTAEEVLQYIGGKDNIEQAAHCVTRLRIALKDESKIDNDKLQSVSLVKGAFHNAGVFQIVIGPGDVDRVYAELIT LAGMKEATVADVKDSGNQKLNPAQKFVKVFSDVFMPILPAIVTAGLLMGINNLLGAKDLFFDGKNLLDVYPNLGGLWDLI NMMANTAFVFLPALVGWSATKRFGGSPILGIVMGLMLVHPALLNAWDYGKAATGLDGQKIEYFDILGLFQIEKVGYQGQI LPVLVAAFVLSKVEIFLKKHVPNAIQLLVVPITTIVVTGVLALGIIGPVTRHIGDLLTAGLVGVYETVPVVGAVLFGALY APLVITGMHHMFIAIDLQLIAQHGGTFIWPMIALSNIAQGSAALAMFWVSKNQNDKSMASTSAISAYFGITEPAMFGVNL RNKFPFYAAIIGSAIAAIFITLNGVLAPAIGIGGLPAFISIIPKSIPMFIVGMIIAVVIPFTLTWLFAKRVKQK
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI2367362, Length=452, Percent_Identity=40.2654867256637, Blast_Score=345, Evalue=4e-96, Organism=Escherichia coli, GI1790159, Length=474, Percent_Identity=29.1139240506329, Blast_Score=196, Evalue=4e-51, Organism=Escherichia coli, GI48994906, Length=479, Percent_Identity=27.5574112734864, Blast_Score=162, Evalue=3e-41, Organism=Escherichia coli, GI1788769, Length=491, Percent_Identity=28.7169042769857, Blast_Score=152, Evalue=5e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018113 - InterPro: IPR004719 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011535 - InterPro: IPR011296 [H]
Pfam domain/function: PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 50949; Mature: 50818
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKDYRKTAEEVLQYIGGKDNIEQAAHCVTRLRIALKDESKIDNDKLQSVSLVKGAFHNA CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCC GVFQIVIGPGDVDRVYAELITLAGMKEATVADVKDSGNQKLNPAQKFVKVFSDVFMPILP CEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH AIVTAGLLMGINNLLGAKDLFFDGKNLLDVYPNLGGLWDLINMMANTAFVFLPALVGWSA HHHHHHHHHHHHHHHCCHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH TKRFGGSPILGIVMGLMLVHPALLNAWDYGKAATGLDGQKIEYFDILGLFQIEKVGYQGQ HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC ILPVLVAAFVLSKVEIFLKKHVPNAIQLLVVPITTIVVTGVLALGIIGPVTRHIGDLLTA HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLVGVYETVPVVGAVLFGALYAPLVITGMHHMFIAIDLQLIAQHGGTFIWPMIALSNIAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC GSAALAMFWVSKNQNDKSMASTSAISAYFGITEPAMFGVNLRNKFPFYAAIIGSAIAAIF CCHHEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHH ITLNGVLAPAIGIGGLPAFISIIPKSIPMFIVGMIIAVVIPFTLTWLFAKRVKQK HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GKDYRKTAEEVLQYIGGKDNIEQAAHCVTRLRIALKDESKIDNDKLQSVSLVKGAFHNA CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCC GVFQIVIGPGDVDRVYAELITLAGMKEATVADVKDSGNQKLNPAQKFVKVFSDVFMPILP CEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH AIVTAGLLMGINNLLGAKDLFFDGKNLLDVYPNLGGLWDLINMMANTAFVFLPALVGWSA HHHHHHHHHHHHHHHCCHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH TKRFGGSPILGIVMGLMLVHPALLNAWDYGKAATGLDGQKIEYFDILGLFQIEKVGYQGQ HHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC ILPVLVAAFVLSKVEIFLKKHVPNAIQLLVVPITTIVVTGVLALGIIGPVTRHIGDLLTA HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLVGVYETVPVVGAVLFGALYAPLVITGMHHMFIAIDLQLIAQHGGTFIWPMIALSNIAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC GSAALAMFWVSKNQNDKSMASTSAISAYFGITEPAMFGVNLRNKFPFYAAIIGSAIAAIF CCHHEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHH ITLNGVLAPAIGIGGLPAFISIIPKSIPMFIVGMIIAVVIPFTLTWLFAKRVKQK HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8917076; 8969503; 9272861; 9384377; 7651129 [H]