| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is colA [H]
Identifier: 118476243
GI number: 118476243
Start: 570123
End: 573020
Strand: Direct
Name: colA [H]
Synonym: BALH_0495
Alternate gene names: 118476243
Gene position: 570123-573020 (Clockwise)
Preceding gene: 118476241
Following gene: 118476244
Centisome position: 10.84
GC content: 34.75
Gene sequence:
>2898_bases ATGAACAAGAAATCAAAGATTAATAAAGTTATGCTTAGCATTAGTACAATGGCTCTATCATTAGGGGCGCTTCAAGCTCC TGTATTAGCGGAAGAAAAAGTACCGTATAATGTGTTGAAAACGAAACCAGTTGGAATTGAAAAACCAGTAGATGAGATTG GACACGTTTCTAAAGCGGAGGAAACATTATCGTTTCAAGAGCGGCTAAAAGTAGGAGACTTTTCACAGCGACCAGCATCT ATTACGAACAAAGCGGCAGTAAAGCAAGTTAAAGAAAGCTATTCAATGGCTGATTTAAACAAAATGAATAATCAAGAATT AGTTGAAACTTTAGGCAGTATTAAGTGGCATCAAATTACAGACTTATTCCAGTTTAATGAAGATGCAAAAGCTTTTTATA AAGATAAAGGAAAAATGCAAGTCGTTATAGATGAATTAGCTCATCGGGGTAGTACATTTACAAAGGATGATTCAAAAGGA ATTCAAACGTTTACGGAAGTGTTACGTTCAGCTTTTTATCTGGCATTTTATAATAACGAGTTAAGTGAATTAAATGAAAG AAGCTTCCAGGACAAATGTTTACCTGCTTTAAAAGCAATCGCAAAAAATCCAAACTTTAAGCTTGGTACAGCTGAACAAG ATACAGTCGTATCTGCATACGGTAAATTAATTAGTAATGCGTCAAGCGATGTTGAAACAGTTCAATACGCATCGAATATT TTAAAGCAATACAATGATAATTTTACTACGTATGTAAATGATCGAATGAAGGGACAAGCAATATACGATATTATGCAAGG GATTGACTATGATATACAGTCTTACTTAATTGAAGCTCGTAAAGAAGCGAATGAAACGATGTGGTACGGGAAAGTAGATG GGTTTATTAATGAAATAAATCGTATTGCTCTTTTAAATGAAGTAACACAAGAAAATAAGTGGCTCGTTAATAATGGAATT TACTTTGCAAGTCGTTTAGGGAAGTTTCACAGTAATCCAAATAAAGGTTTAGAAGTTGTGACACAAGCAATGCATATGTA TCCGCGCTTAAGTGAACCGTACTTTGTCGCAGTAGAACAAATTACAACAAATTATAACGGAAAAGATTATAGCGGGAATA CAGTAGATTTAGAGAAAATACGTAAAGAAGGAAAAGAGCAGTACTTACCAAAAACGTATACATTTGATGATGGATCTATC GTATTTAAAACAGGAGATAAAGTATCGGAAGAAAAAATTAAGAGACTATACTGGGCTGCAAAGGAAGTAAAAGCGCAGTA TCATCGTGTAATTGGGAATGACAAAGCGTTAGAGCCGGGCAATGCAGATGATATATTAACGATAGTAATTTATAACAGCC CAGAAGAGTACCAGTTAAATAGACAACTGTATGGATACGAAACAAATAACGGTGGAATTTATATTGAAGAAACAGGAACA TTCTTTACATATGAGCGCACGCCAGAACAAAGCATTTATAGTTTAGAAGAGTTATTCCGTCATGAGTTTACTCATTATCT TCAAGGGAGATATGAAGTGCCAGGTTTATTCGGAAGAGGAGATATGTATCAAAATGAAAGGTTAACTTGGTTCCAAGAAG GAAATGCAGAGTTTTTCGCAGGGTCTACTCGAACAAATAATGTAGTGCCGAGAAAGAGCATCATTAGTGGATTATCATCC GATCCTGCAAGCCGTTATACAGCAGAGCGCACATTATTTGCTAAATATGGTTCTTGGGATTTCTATAATTACTCGTTCGC ATTGCAATCTTACTTATATACACATCAATTTGAAACGTTTGATAAAATTCAAGACTTAATTCGTGCAAATGACGTGAAAA ATTATGATGCCTATCGTGAGAATTTAAGTAAAGACCTTAAACTAAATGAAGAGTATCAAGAGTATATGCAGCAGCTAATC GATAATCAAGATAAATATAATGTACCGGAAGTAGCAGATGATTATTTAGCTGAACATGCCCCAAAATCCTTAACAGCAGT AGAGAAAGAAATTACTGAAACGTTGCCGATGAAAGATGCGAAAATGACAAAACATAGCTCCCAATTCTTTAATACATTTA CATTAGAAGGTACGTATACAGGTAGTGTAACAAAAGGTGAGTCAGAAGATTGGAACGCAATGAGTAAGAAAGTAAATGAA GCTTTGGAACAACTTGCGCAAAAAGAATGGAGTGGCTACAAAACTGTTACAGCATATTTCGTCAATTACCGTGTAAATAG CTCAAATCAATTTGAATATGATGTAGTCTTCCACGGTATCGCAAAAGATGACGAAGAAAATAAAGCTCCAACGGTTCATA TAAATGGGCCTTATAATGGACTTGTAAAAGAAGGTATTCAATTTAAAAGTGATGGCTCAAAAGATGAAGATGGAAAAATC GTTTCTTATTTATGGGACTTTGGAGATGGAAGCACAAGTGCAGAAGTAAATCCGTTACATGTATATGAAAGAGAAGGTTC ATATAAAGTAGCGTTAATAGTAAAAGATGATAAAGGAAAAGAGAGCAAAAGCGAAACAACGGTTACGGTTAAAGATGGAA GTTTAACAGAATCAGAACCAAATAATCGCCCAGAGGAAGCAAATCGTATTGGACTAAATACTACTATAAAAGGTAGCCTT ATCGGCGGGGATCACACTGATGTTTATACATTTAATGTAGCATCAGCGAAAAATATTGATATTTCCGTTTTAAATGAGTA TGGAATCGGGATGACATGGGTACTTCACCATGAATCAGATATGCAAAATTATGCGGCTTACGGTCAAGTAAATGGAAATC ATATAGAGGCAAACTTTAATGCAAAACCAGGTAAGTATTACTTGTATGTATATAAATATGATAATGGTGATGGAACATAC GAATTATCAGTAAAATAA
Upstream 100 bases:
>100_bases AAATGTAAGAAGAAATAATATGAAATATTGCATTTTATATTGTTGTATCCATATTTTATGTTAAATTCGTGAATGGAATA TTTGAATAGGGGGCAAGGAT
Downstream 100 bases:
>100_bases GTGCTTTTCCAATGTATGTTTAACTTTACTTTTTGTGGAAAATAGTATATTATATAGATATATAATATATCGGTTATTTT CTAGGAGGAGCCTGTCACAA
Product: collagenase ColA
Products: NA
Alternate protein names: 120 kDa collagenase [H]
Number of amino acids: Translated: 965; Mature: 965
Protein sequence:
>965_residues MNKKSKINKVMLSISTMALSLGALQAPVLAEEKVPYNVLKTKPVGIEKPVDEIGHVSKAEETLSFQERLKVGDFSQRPAS ITNKAAVKQVKESYSMADLNKMNNQELVETLGSIKWHQITDLFQFNEDAKAFYKDKGKMQVVIDELAHRGSTFTKDDSKG IQTFTEVLRSAFYLAFYNNELSELNERSFQDKCLPALKAIAKNPNFKLGTAEQDTVVSAYGKLISNASSDVETVQYASNI LKQYNDNFTTYVNDRMKGQAIYDIMQGIDYDIQSYLIEARKEANETMWYGKVDGFINEINRIALLNEVTQENKWLVNNGI YFASRLGKFHSNPNKGLEVVTQAMHMYPRLSEPYFVAVEQITTNYNGKDYSGNTVDLEKIRKEGKEQYLPKTYTFDDGSI VFKTGDKVSEEKIKRLYWAAKEVKAQYHRVIGNDKALEPGNADDILTIVIYNSPEEYQLNRQLYGYETNNGGIYIEETGT FFTYERTPEQSIYSLEELFRHEFTHYLQGRYEVPGLFGRGDMYQNERLTWFQEGNAEFFAGSTRTNNVVPRKSIISGLSS DPASRYTAERTLFAKYGSWDFYNYSFALQSYLYTHQFETFDKIQDLIRANDVKNYDAYRENLSKDLKLNEEYQEYMQQLI DNQDKYNVPEVADDYLAEHAPKSLTAVEKEITETLPMKDAKMTKHSSQFFNTFTLEGTYTGSVTKGESEDWNAMSKKVNE ALEQLAQKEWSGYKTVTAYFVNYRVNSSNQFEYDVVFHGIAKDDEENKAPTVHINGPYNGLVKEGIQFKSDGSKDEDGKI VSYLWDFGDGSTSAEVNPLHVYEREGSYKVALIVKDDKGKESKSETTVTVKDGSLTESEPNNRPEEANRIGLNTTIKGSL IGGDHTDVYTFNVASAKNIDISVLNEYGIGMTWVLHHESDMQNYAAYGQVNGNHIEANFNAKPGKYYLYVYKYDNGDGTY ELSVK
Sequences:
>Translated_965_residues MNKKSKINKVMLSISTMALSLGALQAPVLAEEKVPYNVLKTKPVGIEKPVDEIGHVSKAEETLSFQERLKVGDFSQRPAS ITNKAAVKQVKESYSMADLNKMNNQELVETLGSIKWHQITDLFQFNEDAKAFYKDKGKMQVVIDELAHRGSTFTKDDSKG IQTFTEVLRSAFYLAFYNNELSELNERSFQDKCLPALKAIAKNPNFKLGTAEQDTVVSAYGKLISNASSDVETVQYASNI LKQYNDNFTTYVNDRMKGQAIYDIMQGIDYDIQSYLIEARKEANETMWYGKVDGFINEINRIALLNEVTQENKWLVNNGI YFASRLGKFHSNPNKGLEVVTQAMHMYPRLSEPYFVAVEQITTNYNGKDYSGNTVDLEKIRKEGKEQYLPKTYTFDDGSI VFKTGDKVSEEKIKRLYWAAKEVKAQYHRVIGNDKALEPGNADDILTIVIYNSPEEYQLNRQLYGYETNNGGIYIEETGT FFTYERTPEQSIYSLEELFRHEFTHYLQGRYEVPGLFGRGDMYQNERLTWFQEGNAEFFAGSTRTNNVVPRKSIISGLSS DPASRYTAERTLFAKYGSWDFYNYSFALQSYLYTHQFETFDKIQDLIRANDVKNYDAYRENLSKDLKLNEEYQEYMQQLI DNQDKYNVPEVADDYLAEHAPKSLTAVEKEITETLPMKDAKMTKHSSQFFNTFTLEGTYTGSVTKGESEDWNAMSKKVNE ALEQLAQKEWSGYKTVTAYFVNYRVNSSNQFEYDVVFHGIAKDDEENKAPTVHINGPYNGLVKEGIQFKSDGSKDEDGKI VSYLWDFGDGSTSAEVNPLHVYEREGSYKVALIVKDDKGKESKSETTVTVKDGSLTESEPNNRPEEANRIGLNTTIKGSL IGGDHTDVYTFNVASAKNIDISVLNEYGIGMTWVLHHESDMQNYAAYGQVNGNHIEANFNAKPGKYYLYVYKYDNGDGTY ELSVK >Mature_965_residues MNKKSKINKVMLSISTMALSLGALQAPVLAEEKVPYNVLKTKPVGIEKPVDEIGHVSKAEETLSFQERLKVGDFSQRPAS ITNKAAVKQVKESYSMADLNKMNNQELVETLGSIKWHQITDLFQFNEDAKAFYKDKGKMQVVIDELAHRGSTFTKDDSKG IQTFTEVLRSAFYLAFYNNELSELNERSFQDKCLPALKAIAKNPNFKLGTAEQDTVVSAYGKLISNASSDVETVQYASNI LKQYNDNFTTYVNDRMKGQAIYDIMQGIDYDIQSYLIEARKEANETMWYGKVDGFINEINRIALLNEVTQENKWLVNNGI YFASRLGKFHSNPNKGLEVVTQAMHMYPRLSEPYFVAVEQITTNYNGKDYSGNTVDLEKIRKEGKEQYLPKTYTFDDGSI VFKTGDKVSEEKIKRLYWAAKEVKAQYHRVIGNDKALEPGNADDILTIVIYNSPEEYQLNRQLYGYETNNGGIYIEETGT FFTYERTPEQSIYSLEELFRHEFTHYLQGRYEVPGLFGRGDMYQNERLTWFQEGNAEFFAGSTRTNNVVPRKSIISGLSS DPASRYTAERTLFAKYGSWDFYNYSFALQSYLYTHQFETFDKIQDLIRANDVKNYDAYRENLSKDLKLNEEYQEYMQQLI DNQDKYNVPEVADDYLAEHAPKSLTAVEKEITETLPMKDAKMTKHSSQFFNTFTLEGTYTGSVTKGESEDWNAMSKKVNE ALEQLAQKEWSGYKTVTAYFVNYRVNSSNQFEYDVVFHGIAKDDEENKAPTVHINGPYNGLVKEGIQFKSDGSKDEDGKI VSYLWDFGDGSTSAEVNPLHVYEREGSYKVALIVKDDKGKESKSETTVTVKDGSLTESEPNNRPEEANRIGLNTTIKGSL IGGDHTDVYTFNVASAKNIDISVLNEYGIGMTWVLHHESDMQNYAAYGQVNGNHIEANFNAKPGKYYLYVYKYDNGDGTY ELSVK
Specific function: Unknown
COG id: COG3291
COG function: function code R; FOG: PKD repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PKD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013510 - InterPro: IPR007280 - InterPro: IPR002169 - InterPro: IPR013661 - InterPro: IPR022409 - InterPro: IPR000601 [H]
Pfam domain/function: PF01752 Peptidase_M9; PF08453 Peptidase_M9_N; PF00801 PKD; PF04151 PPC [H]
EC number: =3.4.24.3 [H]
Molecular weight: Translated: 110041; Mature: 110041
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS50093 PKD ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKSKINKVMLSISTMALSLGALQAPVLAEEKVPYNVLKTKPVGIEKPVDEIGHVSKAE CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEECCCCCCCCCHHHHHCHHHHH ETLSFQERLKVGDFSQRPASITNKAAVKQVKESYSMADLNKMNNQELVETLGSIKWHQIT HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHH DLFQFNEDAKAFYKDKGKMQVVIDELAHRGSTFTKDDSKGIQTFTEVLRSAFYLAFYNNE HHHHCCCHHHHHHHCCCCEEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHEEEEEECCH LSELNERSFQDKCLPALKAIAKNPNFKLGTAEQDTVVSAYGKLISNASSDVETVQYASNI HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH LKQYNDNFTTYVNDRMKGQAIYDIMQGIDYDIQSYLIEARKEANETMWYGKVDGFINEIN HHHHCCCCEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHH RIALLNEVTQENKWLVNNGIYFASRLGKFHSNPNKGLEVVTQAMHMYPRLSEPYFVAVEQ HHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEE ITTNYNGKDYSGNTVDLEKIRKEGKEQYLPKTYTFDDGSIVFKTGDKVSEEKIKRLYWAA HHCCCCCCCCCCCEEEHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHH KEVKAQYHRVIGNDKALEPGNADDILTIVIYNSPEEYQLNRQLYGYETNNGGIYIEETGT HHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHEECCEEEEEEECCCCEEEEECCC FFTYERTPEQSIYSLEELFRHEFTHYLQGRYEVPGLFGRGDMYQNERLTWFQEGNAEFFA EEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEE GSTRTNNVVPRKSIISGLSSDPASRYTAERTLFAKYGSWDFYNYSFALQSYLYTHQFETF CCCCCCCCCCHHHHHHCCCCCCHHHHHHHHEEEEECCCCCEEEHHHHHHHHHHHHHHHHH DKIQDLIRANDVKNYDAYRENLSKDLKLNEEYQEYMQQLIDNQDKYNVPEVADDYLAEHA HHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC PKSLTAVEKEITETLPMKDAKMTKHSSQFFNTFTLEGTYTGSVTKGESEDWNAMSKKVNE CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCHHHHHHHHHH ALEQLAQKEWSGYKTVTAYFVNYRVNSSNQFEYDVVFHGIAKDDEENKAPTVHINGPYNG HHHHHHHHHCCCCEEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCH LVKEGIQFKSDGSKDEDGKIVSYLWDFGDGSTSAEVNPLHVYEREGSYKVALIVKDDKGK HHHCCCEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCC ESKSETTVTVKDGSLTESEPNNRPEEANRIGLNTTIKGSLIGGDHTDVYTFNVASAKNID CCCCCCEEEEECCCCCCCCCCCCCCHHHHCCCCEEEEEEEECCCCCEEEEEECCCCCCCE ISVLNEYGIGMTWVLHHESDMQNYAAYGQVNGNHIEANFNAKPGKYYLYVYKYDNGDGTY EEEEECCCCCEEEEEECCCCHHHHHHCCCCCCCEEEEECCCCCCEEEEEEEEEECCCCEE ELSVK EEEEC >Mature Secondary Structure MNKKSKINKVMLSISTMALSLGALQAPVLAEEKVPYNVLKTKPVGIEKPVDEIGHVSKAE CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEECCCCCCCCCHHHHHCHHHHH ETLSFQERLKVGDFSQRPASITNKAAVKQVKESYSMADLNKMNNQELVETLGSIKWHQIT HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHH DLFQFNEDAKAFYKDKGKMQVVIDELAHRGSTFTKDDSKGIQTFTEVLRSAFYLAFYNNE HHHHCCCHHHHHHHCCCCEEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHEEEEEECCH LSELNERSFQDKCLPALKAIAKNPNFKLGTAEQDTVVSAYGKLISNASSDVETVQYASNI HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHH LKQYNDNFTTYVNDRMKGQAIYDIMQGIDYDIQSYLIEARKEANETMWYGKVDGFINEIN HHHHCCCCEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHH RIALLNEVTQENKWLVNNGIYFASRLGKFHSNPNKGLEVVTQAMHMYPRLSEPYFVAVEQ HHHHHHHHHHCCCEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEE ITTNYNGKDYSGNTVDLEKIRKEGKEQYLPKTYTFDDGSIVFKTGDKVSEEKIKRLYWAA HHCCCCCCCCCCCEEEHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHH KEVKAQYHRVIGNDKALEPGNADDILTIVIYNSPEEYQLNRQLYGYETNNGGIYIEETGT HHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCHHEECCEEEEEEECCCCEEEEECCC FFTYERTPEQSIYSLEELFRHEFTHYLQGRYEVPGLFGRGDMYQNERLTWFQEGNAEFFA EEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEE GSTRTNNVVPRKSIISGLSSDPASRYTAERTLFAKYGSWDFYNYSFALQSYLYTHQFETF CCCCCCCCCCHHHHHHCCCCCCHHHHHHHHEEEEECCCCCEEEHHHHHHHHHHHHHHHHH DKIQDLIRANDVKNYDAYRENLSKDLKLNEEYQEYMQQLIDNQDKYNVPEVADDYLAEHA HHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC PKSLTAVEKEITETLPMKDAKMTKHSSQFFNTFTLEGTYTGSVTKGESEDWNAMSKKVNE CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCHHHHHHHHHH ALEQLAQKEWSGYKTVTAYFVNYRVNSSNQFEYDVVFHGIAKDDEENKAPTVHINGPYNG HHHHHHHHHCCCCEEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCH LVKEGIQFKSDGSKDEDGKIVSYLWDFGDGSTSAEVNPLHVYEREGSYKVALIVKDDKGK HHHCCCEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEEEEECCCCC ESKSETTVTVKDGSLTESEPNNRPEEANRIGLNTTIKGSLIGGDHTDVYTFNVASAKNID CCCCCCEEEEECCCCCCCCCCCCCCHHHHCCCCEEEEEEEECCCCCEEEEEECCCCCCCE ISVLNEYGIGMTWVLHHESDMQNYAAYGQVNGNHIEANFNAKPGKYYLYVYKYDNGDGTY EEEEECCCCCEEEEEECCCCHHHHHHCCCCCCCEEEEECCCCCCEEEEEEEEEECCCCEE ELSVK EEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8282691; 11792842 [H]