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The map label for this gene is yhbA [H]

Identifier: 118476234

GI number: 118476234

Start: 554949

End: 556091

Strand: Direct

Name: yhbA [H]

Synonym: BALH_0485

Alternate gene names: 118476234

Gene position: 554949-556091 (Clockwise)

Preceding gene: 118476233

Following gene: 118476235

Centisome position: 10.56

GC content: 39.2

Gene sequence:

>1143_bases
ATGGATTTTGAACAATTAAAGCAAGATGTCATTGCGTATAGTAAAACGATTGGTATAGATAAAATAGGCTTTGCTAGTGC
TTCACCATTTGAAGAATTAAAGCAGCGGTTAATCCAGCAGCAACAATTAAATTATCAATCTGGATTTGAAGAGCCTGATA
TAGAAAAGAGAACGAACCCACAGCTTCTATTACCTGGTGCAAAATCAATTATTGCGATTGCATTAGCGTATCCTTCAAAA
TTAAAAAATGCACCATTAAGTAAGCGTGGAGAACGCCGTGGGATTTTTTGTCGTGCTTCTTGGGGACAAGATTATCATCT
AGTTTTACGAGATCGTTTGCAGAAATTAGAAGCATATTTAATCGAAAAACTTCCCGATATAGAAGTTAAGTCAATGGTTG
ATACGGGTGAATTAAGTGATCGAGCTGTTTCAGAGCGTGCTGGTATTGGATGGAGCGGTAAGAACTGCTCTATTATTACA
CCTGAATTTGGTTCGTATGTGTATTTAGGAGAAATGATTACAAACGTTCCATTCCCACCAGATCAGCCGATAGAAGATCA
ATGCGGGAGCTGTACAAAGTGTATTGATATTTGTCCTACAGGTGCTTTAATACAAGGAGGACAGTTAGATTCGAAGAAGT
GTATAGCATTTTTAACACAGACGAAAGGATTCCTACCAGAAGAGTATCGCGACAAAATAGGTAATCGTATTTATGGATGT
GATACGTGTCAGACAGTTTGTCCGAAAAATAAAGGAATGGATTTTCATAATCACCCTGAGATGGAACCAGATCCTGAGTT
AGTTAAACCGTTATTAACACCGCTTTTAACAATTAGCAATCGTGATTTTAAAGAGAAATATGGAATTATGTCTGGTTCAT
GGAGAGGTAAAAAACCGTTGCAACGAAATGCGATTTTGGCACTTGCACATTTTAAAGAAGCATCAGCAATTCCAGATTTA
ATAGGTGTTATGAAAGATGATCCAAGACCAGTGCTTCGCGGGACGGCAGCGTGGGCGCTTGGGAAAATTGGTGGAGACGG
CGTGGGCGAAGCTATTGAAAAAGCGATGCAACGTGAGAAAGACGAAGAGGTTCTTCATGAAATGAATCGCGGACTTGAAC
TGTTAGCGCAGAAAAAAGAGTAG

Upstream 100 bases:

>100_bases
GACAGGAAAAAGGTGAGATTCCTTTTCGGTAGTTGGCATTTGACTTGGTTCGCCAACAATTTATAGATTTTTATAAGAAT
TTCAAACCAGGCGATTAGGA

Downstream 100 bases:

>100_bases
ATAATATCTCCCTTTTTCATATTGTAATATGGGAGGGAGACGAAATGGTTGTAAAAATAAATATTGAAAAGCAAGTCCAA
CACTTTTTAGCATATATAAC

Product: iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MDFEQLKQDVIAYSKTIGIDKIGFASASPFEELKQRLIQQQQLNYQSGFEEPDIEKRTNPQLLLPGAKSIIAIALAYPSK
LKNAPLSKRGERRGIFCRASWGQDYHLVLRDRLQKLEAYLIEKLPDIEVKSMVDTGELSDRAVSERAGIGWSGKNCSIIT
PEFGSYVYLGEMITNVPFPPDQPIEDQCGSCTKCIDICPTGALIQGGQLDSKKCIAFLTQTKGFLPEEYRDKIGNRIYGC
DTCQTVCPKNKGMDFHNHPEMEPDPELVKPLLTPLLTISNRDFKEKYGIMSGSWRGKKPLQRNAILALAHFKEASAIPDL
IGVMKDDPRPVLRGTAAWALGKIGGDGVGEAIEKAMQREKDEEVLHEMNRGLELLAQKKE

Sequences:

>Translated_380_residues
MDFEQLKQDVIAYSKTIGIDKIGFASASPFEELKQRLIQQQQLNYQSGFEEPDIEKRTNPQLLLPGAKSIIAIALAYPSK
LKNAPLSKRGERRGIFCRASWGQDYHLVLRDRLQKLEAYLIEKLPDIEVKSMVDTGELSDRAVSERAGIGWSGKNCSIIT
PEFGSYVYLGEMITNVPFPPDQPIEDQCGSCTKCIDICPTGALIQGGQLDSKKCIAFLTQTKGFLPEEYRDKIGNRIYGC
DTCQTVCPKNKGMDFHNHPEMEPDPELVKPLLTPLLTISNRDFKEKYGIMSGSWRGKKPLQRNAILALAHFKEASAIPDL
IGVMKDDPRPVLRGTAAWALGKIGGDGVGEAIEKAMQREKDEEVLHEMNRGLELLAQKKE
>Mature_380_residues
MDFEQLKQDVIAYSKTIGIDKIGFASASPFEELKQRLIQQQQLNYQSGFEEPDIEKRTNPQLLLPGAKSIIAIALAYPSK
LKNAPLSKRGERRGIFCRASWGQDYHLVLRDRLQKLEAYLIEKLPDIEVKSMVDTGELSDRAVSERAGIGWSGKNCSIIT
PEFGSYVYLGEMITNVPFPPDQPIEDQCGSCTKCIDICPTGALIQGGQLDSKKCIAFLTQTKGFLPEEYRDKIGNRIYGC
DTCQTVCPKNKGMDFHNHPEMEPDPELVKPLLTPLLTISNRDFKEKYGIMSGSWRGKKPLQRNAILALAHFKEASAIPDL
IGVMKDDPRPVLRGTAAWALGKIGGDGVGEAIEKAMQREKDEEVLHEMNRGLELLAQKKE

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 HEAT-like PBS-type repeats [H]

Homologues:

Organism=Escherichia coli, GI1790608, Length=351, Percent_Identity=31.3390313390313, Blast_Score=189, Evalue=4e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR013542
- InterPro:   IPR009051
- InterPro:   IPR004155 [H]

Pfam domain/function: PF08331 DUF1730; PF03130 HEAT_PBS [H]

EC number: NA

Molecular weight: Translated: 42427; Mature: 42427

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFEQLKQDVIAYSKTIGIDKIGFASASPFEELKQRLIQQQQLNYQSGFEEPDIEKRTNP
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
QLLLPGAKSIIAIALAYPSKLKNAPLSKRGERRGIFCRASWGQDYHLVLRDRLQKLEAYL
CEECCCCHHHHHHHHHCHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
IEKLPDIEVKSMVDTGELSDRAVSERAGIGWSGKNCSIITPEFGSYVYLGEMITNVPFPP
HHHCCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCEEEHHHHHHCCCCCC
DQPIEDQCGSCTKCIDICPTGALIQGGQLDSKKCIAFLTQTKGFLPEEYRDKIGNRIYGC
CCCHHHHHCCHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHCCEEECC
DTCQTVCPKNKGMDFHNHPEMEPDPELVKPLLTPLLTISNRDFKEKYGIMSGSWRGKKPL
CHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCC
QRNAILALAHFKEASAIPDLIGVMKDDPRPVLRGTAAWALGKIGGDGVGEAIEKAMQREK
HHHHEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCH
DEEVLHEMNRGLELLAQKKE
HHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDFEQLKQDVIAYSKTIGIDKIGFASASPFEELKQRLIQQQQLNYQSGFEEPDIEKRTNP
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
QLLLPGAKSIIAIALAYPSKLKNAPLSKRGERRGIFCRASWGQDYHLVLRDRLQKLEAYL
CEECCCCHHHHHHHHHCHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
IEKLPDIEVKSMVDTGELSDRAVSERAGIGWSGKNCSIITPEFGSYVYLGEMITNVPFPP
HHHCCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCCEEEHHHHHHCCCCCC
DQPIEDQCGSCTKCIDICPTGALIQGGQLDSKKCIAFLTQTKGFLPEEYRDKIGNRIYGC
CCCHHHHHCCHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHCCEEECC
DTCQTVCPKNKGMDFHNHPEMEPDPELVKPLLTPLLTISNRDFKEKYGIMSGSWRGKKPL
CHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCC
QRNAILALAHFKEASAIPDLIGVMKDDPRPVLRGTAAWALGKIGGDGVGEAIEKAMQREK
HHHHEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCH
DEEVLHEMNRGLELLAQKKE
HHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]