Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
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Accession | NC_008600 |
Length | 5,257,091 |
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The map label for this gene is 118476211
Identifier: 118476211
GI number: 118476211
Start: 519450
End: 519980
Strand: Direct
Name: 118476211
Synonym: BALH_0460
Alternate gene names: NA
Gene position: 519450-519980 (Clockwise)
Preceding gene: 118476210
Following gene: 118476212
Centisome position: 9.88
GC content: 33.71
Gene sequence:
>531_bases ATGGGATTTCCCAAAGAAGGAGAAAAAGTACAAATACATAGTTATAAACATAATGGCTCCATTCATAGAATGTGGGAAGA GACAACAATTTTAAAAGGGACACAGAGTCTTGTAATCGGAGCGAATGATCGTACAGTAGTGACGGAATCGGATGGCCGAA CATGGATTACTCGTGAACCAGCAATTTGTTATTTTCATGCAAACTATTGGTTTAATGTAATTGGAATGTTAAGGGAAGAG GGAGTATACTATTATTGTAATTTAAGCTCACCTTTTGCATATGATTCTGAAGCGTTAAAGTATATTGATTATGATTTAGA TATTAAAGTGTATCCAGACATGACATATACGCTTTTAGATGAAGATGAGTATGAAAAACATAGTCAAATTATGCAATATC CACCTGTTATTGATACGATTTTAAAACGAAATGTAGCACAATTAACGCAATGGATTCATCAAAGAAAAGGGCCATTCGCG CCAGATTTTGTAGATATGTGGTATGAGAGATATTTAATGTACAGAAATTAA
Upstream 100 bases:
>100_bases GCCTTGGCGCTTTAGTTTTAAAATTTCGACAAAAAAGTTATAATAGAAAAAAAGTGAATGCAGCTCAAAGGGCATTTGCA GTTGAAAGAAGGGAGCATAT
Downstream 100 bases:
>100_bases CACAAACCTGCAGGGGATTTCCCGGCAGGTTTGTCCTATTAGAGGGGGGATTATGTGCAAGGTATAAAAAGATATTTGCA ATTTGTTAAACCATATCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MGFPKEGEKVQIHSYKHNGSIHRMWEETTILKGTQSLVIGANDRTVVTESDGRTWITREPAICYFHANYWFNVIGMLREE GVYYYCNLSSPFAYDSEALKYIDYDLDIKVYPDMTYTLLDEDEYEKHSQIMQYPPVIDTILKRNVAQLTQWIHQRKGPFA PDFVDMWYERYLMYRN
Sequences:
>Translated_176_residues MGFPKEGEKVQIHSYKHNGSIHRMWEETTILKGTQSLVIGANDRTVVTESDGRTWITREPAICYFHANYWFNVIGMLREE GVYYYCNLSSPFAYDSEALKYIDYDLDIKVYPDMTYTLLDEDEYEKHSQIMQYPPVIDTILKRNVAQLTQWIHQRKGPFA PDFVDMWYERYLMYRN >Mature_175_residues GFPKEGEKVQIHSYKHNGSIHRMWEETTILKGTQSLVIGANDRTVVTESDGRTWITREPAICYFHANYWFNVIGMLREEG VYYYCNLSSPFAYDSEALKYIDYDLDIKVYPDMTYTLLDEDEYEKHSQIMQYPPVIDTILKRNVAQLTQWIHQRKGPFAP DFVDMWYERYLMYRN
Specific function: Unknown
COG id: COG3557
COG function: function code J; Uncharacterized domain/protein associated with RNAses G and E
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0374 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007295 - InterPro: IPR016882 [H]
Pfam domain/function: PF04167 DUF402 [H]
EC number: NA
Molecular weight: Translated: 21009; Mature: 20878
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFPKEGEKVQIHSYKHNGSIHRMWEETTILKGTQSLVIGANDRTVVTESDGRTWITREP CCCCCCCCEEEEEEEECCCCEEEEEHHHEEECCCCEEEEECCCCEEEECCCCCEEEECCC AICYFHANYWFNVIGMLREEGVYYYCNLSSPFAYDSEALKYIDYDLDIKVYPDMTYTLLD EEEEEECCHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHEEECCCEEEEECCCCEEEEEC EDEYEKHSQIMQYPPVIDTILKRNVAQLTQWIHQRKGPFAPDFVDMWYERYLMYRN CHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure GFPKEGEKVQIHSYKHNGSIHRMWEETTILKGTQSLVIGANDRTVVTESDGRTWITREP CCCCCCCEEEEEEEECCCCEEEEEHHHEEECCCCEEEEECCCCEEEECCCCCEEEECCC AICYFHANYWFNVIGMLREEGVYYYCNLSSPFAYDSEALKYIDYDLDIKVYPDMTYTLLD EEEEEECCHHHHHHHHHHHCCEEEEEECCCCCCCCCCHHEEECCCEEEEECCCCEEEEEC EDEYEKHSQIMQYPPVIDTILKRNVAQLTQWIHQRKGPFAPDFVDMWYERYLMYRN CHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA