Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
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Accession | NC_008600 |
Length | 5,257,091 |
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The map label for this gene is yfmM [H]
Identifier: 118476138
GI number: 118476138
Start: 441560
End: 442111
Strand: Direct
Name: yfmM [H]
Synonym: BALH_0383
Alternate gene names: 118476138
Gene position: 441560-442111 (Clockwise)
Preceding gene: 118476137
Following gene: 118476139
Centisome position: 8.4
GC content: 34.24
Gene sequence:
>552_bases ATGAGTATATTAACGGTAGAAAATTTAAGTCATTCGTATGGTGAGAAAACCATTTTATATAATGCATGTTTTCGACTATT GAAGGGCGAGCATGTTGGGATAGTAGGGGAAAATGGAATTGGAAAATCAACATTGCTAAGGATTTTAACAGGAGAACTTA TACATGATGATGGGAATATTGAATGGTTTCCTCATGTGAAGATAGGTTTTTTACAGCAGCATATGGATTTACAAGAAGGG ATGACAATTGAGGGATACTTGCAAAGTGCATTTGCTGATTTGTATGCGATTGAATGCGAAATGTTAAAAATTGCTGAAGA AATGAATGGAGCAGGAGAAGTAGAAAAACTGTTAGTAAAGTATGGAGAATTACAAACTATATTGGAAAGCTCTAATTTCT ATCACATTCATGCAGAAGTTGAAGAAGTAGCAATCGGTTTAGGTTTATTTGAAATAGGTTTGAAAAAGGATGTATCGAAG TTAAGTGGGGGACAGCGAACAAAGTTATTACTTGGGAAGCTTCTTTTAGAAAAGCTGATGTTTTATTACTAG
Upstream 100 bases:
>100_bases TGTATTCACCTTACCCATTTTTATATGCACAATTAAATAAGGCTTTATACTGTTGCTCTCTCTATTTAGCTTATGAACTA TAAGTAAAGGAGAGAAAATA
Downstream 100 bases:
>100_bases ATGAGCCAACAAATTATTTAGACACAGCCCATATAGAATGGTTGCAATCGTATTTGAGACTATATGAAAAAGCTTATGTA ATCATTTCGCATGATGAATT
Product: ABC transporter ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MSILTVENLSHSYGEKTILYNACFRLLKGEHVGIVGENGIGKSTLLRILTGELIHDDGNIEWFPHVKIGFLQQHMDLQEG MTIEGYLQSAFADLYAIECEMLKIAEEMNGAGEVEKLLVKYGELQTILESSNFYHIHAEVEEVAIGLGLFEIGLKKDVSK LSGGQRTKLLLGKLLLEKLMFYY
Sequences:
>Translated_183_residues MSILTVENLSHSYGEKTILYNACFRLLKGEHVGIVGENGIGKSTLLRILTGELIHDDGNIEWFPHVKIGFLQQHMDLQEG MTIEGYLQSAFADLYAIECEMLKIAEEMNGAGEVEKLLVKYGELQTILESSNFYHIHAEVEEVAIGLGLFEIGLKKDVSK LSGGQRTKLLLGKLLLEKLMFYY >Mature_182_residues SILTVENLSHSYGEKTILYNACFRLLKGEHVGIVGENGIGKSTLLRILTGELIHDDGNIEWFPHVKIGFLQQHMDLQEGM TIEGYLQSAFADLYAIECEMLKIAEEMNGAGEVEKLLVKYGELQTILESSNFYHIHAEVEEVAIGLGLFEIGLKKDVSKL SGGQRTKLLLGKLLLEKLMFYY
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Escherichia coli, GI2367384, Length=169, Percent_Identity=30.1775147928994, Blast_Score=73, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 20538; Mature: 20407
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS00211 ABC_TRANSPORTER_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILTVENLSHSYGEKTILYNACFRLLKGEHVGIVGENGIGKSTLLRILTGELIHDDGNI CCEEEECCCCHHHCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHEECCCCE EWFPHVKIGFLQQHMDLQEGMTIEGYLQSAFADLYAIECEMLKIAEEMNGAGEVEKLLVK EEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH YGELQTILESSNFYHIHAEVEEVAIGLGLFEIGLKKDVSKLSGGQRTKLLLGKLLLEKLM HHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH FYY HCC >Mature Secondary Structure SILTVENLSHSYGEKTILYNACFRLLKGEHVGIVGENGIGKSTLLRILTGELIHDDGNI CEEEECCCCHHHCCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHEECCCCE EWFPHVKIGFLQQHMDLQEGMTIEGYLQSAFADLYAIECEMLKIAEEMNGAGEVEKLLVK EEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH YGELQTILESSNFYHIHAEVEEVAIGLGLFEIGLKKDVSKLSGGQRTKLLLGKLLLEKLM HHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH FYY HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9272861; 9384377 [H]