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The map label for this gene is arcD [H]

Identifier: 118476120

GI number: 118476120

Start: 417354

End: 418778

Strand: Direct

Name: arcD [H]

Synonym: BALH_0365

Alternate gene names: 118476120

Gene position: 417354-418778 (Clockwise)

Preceding gene: 118476119

Following gene: 118476121

Centisome position: 7.94

GC content: 36.28

Gene sequence:

>1425_bases
GTGAGTGGAATGGGTGAAGATAAGAAACTAGGATTGTTTACATTAACGGCTCTTGTAGTAGGGTCTATGATTGGCGGTGG
AGCCTTTAATTTAGCGAGTGATATGGCAAAAGGTGCTGGTGCTGGAGCCATTATTATTGGCTGGGTTATAACAGGAATTG
GGATGATTGCACTTGGATTATCTTTTCAAAATCTAACTGTAAAACGGCCAGATTTAGATGGTGGTATTTTTAGCTATGCA
AAAGCAGGGTTTGGTAATTTTATGGGGTTTAATAGTGCGTGGGGGTACTGGCTATCTGCTTGGCTTGGGAATGTAGCTTA
CGGCACATTATTGTTTTCTTCATTAGGATATTTCTTTCCAATCTTTGAAGGCGGGCAAAATGTAGCGTCCATTATTGGGG
CAAGCGTATTATTATGGTGTGTTCACATGTTAATTTTACGCGGAGTTCAATCAGCAGCACTTGTGAATTTAGTAACTACA
ATCGCAAAATTAGTACCTGTATTTGTATTTATTGTCATAGGAATCTTCGCGTTTCATATTGATACGTTCCTAGATGGATT
TTGGGGGCAAACTAGTTCTTTTTCATGGGGAGCAGTTGGCAGCCAAGTTAAAAGTACGATGCTTGTAACTTTATGGGTAT
TTATTGGGGTAGAAGGTGCTGTTGTTTTATCTAGTCGAGCAAAAAATAGAAGTGATGTAGGGAAAGCAACGGTTATTGGC
TTAATTGGTACACTCATCATTTACATTTTAATCACATTATTGTCTCTTGGACTTATGCAGCAAGCAGATATTGCTGGTTT
GAAAAATCCGGCTATGGCTTATTTATTTGAAAGTGTTGTTGGAAAATGGGGTGCTATCTTTATTAACTTAGGTTTAGTCA
TCTCTGTATTAGGTGCTTGGTTAGGTTGGACTTTGCTCGCTTCTGAAATTCCATATTTAGCGGCTAAAGATGGAGTATTT
CCAAAATGGTTCGCAAAAGAAAATAAAAATAAGGCTCCAGTAAATTCATTATGGATAACAAATGGTTTAATTCAAATGTT
CTTGTTAACATTCGTCGTTTCTGATCAGGCGTATAATTTTGCATTCTCTTTAGCATCTTCAGCTATTTTAATTCCATATG
CTTTTTCAGCATTTTATCAACTGAAGCATAGCTTAAAGTCTGAGGAAGTAGATCGAAATAAAAATATAGTAATTGGCCTG
ATAGCAAGTATTTATGGCGTTTGGTTAGTTTATGCAGCTGGTTTAGAGTATTTATTATTAACAATGACTTTATATGCGCC
AGGTATTTTTATTTTTTACAATGTTCAAAAGCAAAAGAGTTCGAAGCAAATATTTACTCGAGTGGAATTAGCATCATCGG
TAGCAATTGGTGCTTTAGCATTCTTTGCGATTTATGGATTAATTACAGGCAGTATTACTTTATAA

Upstream 100 bases:

>100_bases
CATGGAGTAAAGAAGAAAGGGAGTCTTCCTTTCTTCTTTCTCCTCCTTTAGACACTATCATTCACTATTGCTTTTGTATT
GTTATTGCAATTAAAGAGAG

Downstream 100 bases:

>100_bases
AGCGCTGTGAAAGCGAAATCAACTGGAGGGCTGAAATATGGCACGAAGAAAAATTGTAGTTGCACTAGGAGGAAATGCGA
TACAGTCTGGAAAAGCTACT

Product: arginine-ornithine antiporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 474; Mature: 473

Protein sequence:

>474_residues
MSGMGEDKKLGLFTLTALVVGSMIGGGAFNLASDMAKGAGAGAIIIGWVITGIGMIALGLSFQNLTVKRPDLDGGIFSYA
KAGFGNFMGFNSAWGYWLSAWLGNVAYGTLLFSSLGYFFPIFEGGQNVASIIGASVLLWCVHMLILRGVQSAALVNLVTT
IAKLVPVFVFIVIGIFAFHIDTFLDGFWGQTSSFSWGAVGSQVKSTMLVTLWVFIGVEGAVVLSSRAKNRSDVGKATVIG
LIGTLIIYILITLLSLGLMQQADIAGLKNPAMAYLFESVVGKWGAIFINLGLVISVLGAWLGWTLLASEIPYLAAKDGVF
PKWFAKENKNKAPVNSLWITNGLIQMFLLTFVVSDQAYNFAFSLASSAILIPYAFSAFYQLKHSLKSEEVDRNKNIVIGL
IASIYGVWLVYAAGLEYLLLTMTLYAPGIFIFYNVQKQKSSKQIFTRVELASSVAIGALAFFAIYGLITGSITL

Sequences:

>Translated_474_residues
MSGMGEDKKLGLFTLTALVVGSMIGGGAFNLASDMAKGAGAGAIIIGWVITGIGMIALGLSFQNLTVKRPDLDGGIFSYA
KAGFGNFMGFNSAWGYWLSAWLGNVAYGTLLFSSLGYFFPIFEGGQNVASIIGASVLLWCVHMLILRGVQSAALVNLVTT
IAKLVPVFVFIVIGIFAFHIDTFLDGFWGQTSSFSWGAVGSQVKSTMLVTLWVFIGVEGAVVLSSRAKNRSDVGKATVIG
LIGTLIIYILITLLSLGLMQQADIAGLKNPAMAYLFESVVGKWGAIFINLGLVISVLGAWLGWTLLASEIPYLAAKDGVF
PKWFAKENKNKAPVNSLWITNGLIQMFLLTFVVSDQAYNFAFSLASSAILIPYAFSAFYQLKHSLKSEEVDRNKNIVIGL
IASIYGVWLVYAAGLEYLLLTMTLYAPGIFIFYNVQKQKSSKQIFTRVELASSVAIGALAFFAIYGLITGSITL
>Mature_473_residues
SGMGEDKKLGLFTLTALVVGSMIGGGAFNLASDMAKGAGAGAIIIGWVITGIGMIALGLSFQNLTVKRPDLDGGIFSYAK
AGFGNFMGFNSAWGYWLSAWLGNVAYGTLLFSSLGYFFPIFEGGQNVASIIGASVLLWCVHMLILRGVQSAALVNLVTTI
AKLVPVFVFIVIGIFAFHIDTFLDGFWGQTSSFSWGAVGSQVKSTMLVTLWVFIGVEGAVVLSSRAKNRSDVGKATVIGL
IGTLIIYILITLLSLGLMQQADIAGLKNPAMAYLFESVVGKWGAIFINLGLVISVLGAWLGWTLLASEIPYLAAKDGVFP
KWFAKENKNKAPVNSLWITNGLIQMFLLTFVVSDQAYNFAFSLASSAILIPYAFSAFYQLKHSLKSEEVDRNKNIVIGLI
ASIYGVWLVYAAGLEYLLLTMTLYAPGIFIFYNVQKQKSSKQIFTRVELASSVAIGALAFFAIYGLITGSITL

Specific function: Catalyzes an electroneutral exchange between arginine and ornithine to allow high-efficiency energy conversion in the arginine deiminase pathway [H]

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787890, Length=449, Percent_Identity=46.5478841870824, Blast_Score=401, Evalue=1e-113,
Organism=Escherichia coli, GI2367353, Length=424, Percent_Identity=30.4245283018868, Blast_Score=166, Evalue=4e-42,
Organism=Escherichia coli, GI1786908, Length=426, Percent_Identity=27.4647887323944, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1790575, Length=419, Percent_Identity=26.7303102625298, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI87082250, Length=359, Percent_Identity=25.6267409470752, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1786302, Length=394, Percent_Identity=22.3350253807107, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004841
- InterPro:   IPR002293
- InterPro:   IPR004754
- InterPro:   IPR022461 [H]

Pfam domain/function: PF00324 AA_permease [H]

EC number: NA

Molecular weight: Translated: 50912; Mature: 50780

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SGMGEDKKLGLFTLTALVVGSMIGGGAFNLASDMAKGAGAGAIIIGWVITGIGMIALGL
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC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HHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9053381; 11792842 [H]