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The map label for this gene is mcpA [H]

Identifier: 118476116

GI number: 118476116

Start: 412838

End: 414130

Strand: Direct

Name: mcpA [H]

Synonym: BALH_0360

Alternate gene names: 118476116

Gene position: 412838-414130 (Clockwise)

Preceding gene: 118476112

Following gene: 118476117

Centisome position: 7.85

GC content: 37.51

Gene sequence:

>1293_bases
ATGGAAAAAGAAAGGAAGGCATTTTCCTTTGGCTTACGTACACAACTTATGCTATTCACTACAGTTTTAGCTTTAATTAC
ATATTCAACAAGTATATTTTTTATTTATGTGATATACGATTATTTTCAAAGTTATGTAAGTCAAACTGCATATAATATTA
TCGTTATGCTATTAGGGGTAGTATGGTCTGGAATTTTAGCATATGGAGCAGCCGTATTTTTAATTAAACCGCTTCGAAAG
TTGGAGGAGGCGGCGAGAAAAGCGGCTGAAGGAGACATTCGTGAAGATGTTCCGTTACCGCAGACTGATGATGAAATTAA
ATCTTTAAGTGTTGCATTTAATATGATGCTAGGGAACTTAAGGGGCATGGTAAAAAATATTGATACAACATTTTCGTATA
CAAACAATCAAGTACAGCAAATTAGAAAACAAACAGGCGAAGCAACGAAACAAGCACAAGGTGTTTCTGAAACACTTGCA
GAGATTTCTTCTGGCGCTGAGCAATCAGCGGCATCAATTCAAGCGATTGTTTCTGCTGTTGATACAACAACTTCTATTGC
AAGTGAAGTAGAAGAGAAAGCGAAACAGTCTGATGAGTTGTCTTCAGAAATGGTTCAAGCTTTAGGGCATAGTACTCGTG
TCTTTACGTCTTTAATTCAAGGTATTCAAACATTGGCGAAAGAAAATGAAGATTCAATGCAAAATGTACAGAAGTTAGAG
GAAAGAATGAAACAAGTAGAACACATTGTATCTGTTGTGAGTGAGATTGCTAGCCAAACGAATTTATTAGCACTAAACGC
TTCTATTGAGGCTGCTCGTGCAGGAGAGCATGGAAGAGGCTTTGCGGTTGTTGCGGAAGAAGTACGGAAACTTGCTGATG
AAAGCGATCATTCTGCAAGAAACATATCGCAGTTATTACGGAATATGCAAGAGGAAGTGCAACAAGTTGCAATGAAAATG
ACAGAACAAGTGAAAATAGCTAAAGAAGAGGCGAAACGTGGGGAAGCTACGGAATTAATTTTAAAAGAAATGTCATCAAG
TGTTATGGAAGTAGCGGATGCAACGAAGCAAATTAGTGGTTATATGAATGAACAAGTGAGCCACATTTATCAAACAGGAG
CACAAACAAAGGCCGTAGCAGCAATTGCTGAAGAAACGTCAGCTGGTTCACAAGAAGTAGCACGTGTGACGTTGCAACAA
TCTAAAAATATGATAGCAATCGATCAATTATTAAAGGATTTAGAGAAACAAGCAACAGACTTGAAACAAACAATTGAACG
GTTTTCAATGTGA

Upstream 100 bases:

>100_bases
ATAATAATTTTTTGAAATCCCTATATCCTTCTATAATGAAAATATGGATAATAATATATAGGTAGTACTTATATTACTTA
TAAAAAGGGGGAAAGAAGAG

Downstream 100 bases:

>100_bases
AAAGGAAGAACAGAATGCTGTTCTTCTCTTTTTTTAGCTAGATTTAATATCTATACTTAAATGATATAAACTATGAACGT
TTCCGCAACATTTTTTTATG

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MEKERKAFSFGLRTQLMLFTTVLALITYSTSIFFIYVIYDYFQSYVSQTAYNIIVMLLGVVWSGILAYGAAVFLIKPLRK
LEEAARKAAEGDIREDVPLPQTDDEIKSLSVAFNMMLGNLRGMVKNIDTTFSYTNNQVQQIRKQTGEATKQAQGVSETLA
EISSGAEQSAASIQAIVSAVDTTTSIASEVEEKAKQSDELSSEMVQALGHSTRVFTSLIQGIQTLAKENEDSMQNVQKLE
ERMKQVEHIVSVVSEIASQTNLLALNASIEAARAGEHGRGFAVVAEEVRKLADESDHSARNISQLLRNMQEEVQQVAMKM
TEQVKIAKEEAKRGEATELILKEMSSSVMEVADATKQISGYMNEQVSHIYQTGAQTKAVAAIAEETSAGSQEVARVTLQQ
SKNMIAIDQLLKDLEKQATDLKQTIERFSM

Sequences:

>Translated_430_residues
MEKERKAFSFGLRTQLMLFTTVLALITYSTSIFFIYVIYDYFQSYVSQTAYNIIVMLLGVVWSGILAYGAAVFLIKPLRK
LEEAARKAAEGDIREDVPLPQTDDEIKSLSVAFNMMLGNLRGMVKNIDTTFSYTNNQVQQIRKQTGEATKQAQGVSETLA
EISSGAEQSAASIQAIVSAVDTTTSIASEVEEKAKQSDELSSEMVQALGHSTRVFTSLIQGIQTLAKENEDSMQNVQKLE
ERMKQVEHIVSVVSEIASQTNLLALNASIEAARAGEHGRGFAVVAEEVRKLADESDHSARNISQLLRNMQEEVQQVAMKM
TEQVKIAKEEAKRGEATELILKEMSSSVMEVADATKQISGYMNEQVSHIYQTGAQTKAVAAIAEETSAGSQEVARVTLQQ
SKNMIAIDQLLKDLEKQATDLKQTIERFSM
>Mature_430_residues
MEKERKAFSFGLRTQLMLFTTVLALITYSTSIFFIYVIYDYFQSYVSQTAYNIIVMLLGVVWSGILAYGAAVFLIKPLRK
LEEAARKAAEGDIREDVPLPQTDDEIKSLSVAFNMMLGNLRGMVKNIDTTFSYTNNQVQQIRKQTGEATKQAQGVSETLA
EISSGAEQSAASIQAIVSAVDTTTSIASEVEEKAKQSDELSSEMVQALGHSTRVFTSLIQGIQTLAKENEDSMQNVQKLE
ERMKQVEHIVSVVSEIASQTNLLALNASIEAARAGEHGRGFAVVAEEVRKLADESDHSARNISQLLRNMQEEVQQVAMKM
TEQVKIAKEEAKRGEATELILKEMSSSVMEVADATKQISGYMNEQVSHIYQTGAQTKAVAAIAEETSAGSQEVARVTLQQ
SKNMIAIDQLLKDLEKQATDLKQTIERFSM

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=321, Percent_Identity=27.7258566978193, Blast_Score=98, Evalue=8e-22,
Organism=Escherichia coli, GI1788195, Length=241, Percent_Identity=27.3858921161826, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI1788194, Length=249, Percent_Identity=30.9236947791165, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1787690, Length=234, Percent_Identity=28.6324786324786, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1789453, Length=308, Percent_Identity=27.2727272727273, Blast_Score=83, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 47466; Mature: 47466

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]