| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
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The map label for this gene is yxxD [H]
Identifier: 118476015
GI number: 118476015
Start: 273786
End: 274241
Strand: Direct
Name: yxxD [H]
Synonym: BALH_0253
Alternate gene names: 118476015
Gene position: 273786-274241 (Clockwise)
Preceding gene: 118476014
Following gene: 118476016
Centisome position: 5.21
GC content: 29.61
Gene sequence:
>456_bases ATGTTTAATTTTTTGAAAAAGCATATTGTAGCAGACGAAGGCATTAAATCTAATCAAACCCCTATTCTTTACCCTTTACC AAAAGAAGAGATAGCAGAAGCAGAGGATTTGTTAAAAATGCAGTTCCCTAAAGAACTAAAACGTTTCTATGAAGAAATTG GTTATGGATTTTTAAACACCAACAGAAATTTAATCAATAGATTTATGGACCCGATTTCAGTTGCGGATTTTCGTTTAAGA CAGGATATTTATGAACATAATCCAAACTTGGATGATACAGACGATGAAGAATCATTGGTGTTTTTCGAAATTACGGAAAT TAGTTTTTTAACAATTAAATTTAAAGAAGAAAATGAATTAGGACAGTGTCCCATTTACTCTGAGAACATAAAAATAGCGG ATTCTTTAGAAGAATTTTTAATTAAAATGGACGAAAACCCTGATTATTATATTTAA
Upstream 100 bases:
>100_bases ATCCAGCTAGATATCCTGATGAACATCAAGGTGGAATCCATGCAAAAGATACAATTTCAAGGGAAATCTTTAAATGATAA ATAATGGAGGTAAATAAGCA
Downstream 100 bases:
>100_bases TCTTATTAATAATTGCTTTAAGGATTAGGACTTGAAAAATAGCTAATCGTGAATAACAAAAAGCTTATGTATAACTTGCA TAGGCTTTTATAGTGTCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: ORF1 [H]
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MFNFLKKHIVADEGIKSNQTPILYPLPKEEIAEAEDLLKMQFPKELKRFYEEIGYGFLNTNRNLINRFMDPISVADFRLR QDIYEHNPNLDDTDDEESLVFFEITEISFLTIKFKEENELGQCPIYSENIKIADSLEEFLIKMDENPDYYI
Sequences:
>Translated_151_residues MFNFLKKHIVADEGIKSNQTPILYPLPKEEIAEAEDLLKMQFPKELKRFYEEIGYGFLNTNRNLINRFMDPISVADFRLR QDIYEHNPNLDDTDDEESLVFFEITEISFLTIKFKEENELGQCPIYSENIKIADSLEEFLIKMDENPDYYI >Mature_151_residues MFNFLKKHIVADEGIKSNQTPILYPLPKEEIAEAEDLLKMQFPKELKRFYEEIGYGFLNTNRNLINRFMDPISVADFRLR QDIYEHNPNLDDTDDEESLVFFEITEISFLTIKFKEENELGQCPIYSENIKIADSLEEFLIKMDENPDYYI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018958 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17945; Mature: 17945
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNFLKKHIVADEGIKSNQTPILYPLPKEEIAEAEDLLKMQFPKELKRFYEEIGYGFLNT CCHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEECC NRNLINRFMDPISVADFRLRQDIYEHNPNLDDTDDEESLVFFEITEISFLTIKFKEENEL CHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCEEEEEEEECCCCCC GQCPIYSENIKIADSLEEFLIKMDENPDYYI CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MFNFLKKHIVADEGIKSNQTPILYPLPKEEIAEAEDLLKMQFPKELKRFYEEIGYGFLNT CCHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEECC NRNLINRFMDPISVADFRLRQDIYEHNPNLDDTDDEESLVFFEITEISFLTIKFKEENEL CHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCEEEEEEEECCCCCC GQCPIYSENIKIADSLEEFLIKMDENPDYYI CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7704263; 8628237; 9384377; 7883710 [H]