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The map label for this gene is yrdR [H]

Identifier: 118475970

GI number: 118475970

Start: 213545

End: 214573

Strand: Direct

Name: yrdR [H]

Synonym: BALH_0206

Alternate gene names: 118475970

Gene position: 213545-214573 (Clockwise)

Preceding gene: 118475968

Following gene: 118475971

Centisome position: 4.06

GC content: 34.89

Gene sequence:

>1029_bases
GTGATATATTTTTTCTTTTACAATTCTCTTTGTGCAAATAGAAAGAAGCGGGGGATTGTGGTGAGAAGAGGTCAAATGAT
AATAGGAGCTTTAGCATGTTTGATTGCAAGTATGTCATGGGGAGCGATGTTTCCAGTTGCTGATCATGCGTTAGAATACA
TAGATCCGTTTTATTTTTCGCTTATTCGCTATGGAGCGGTGGCGATAATGCTGATTATATTGTTGTTAATGAAAGAAGGG
AAACAGGCATTTCGTTTAGAAGGAAGAGGAAAGTTACTCGTCTTTTTCGGAACGATGGCGTTTACTGTATATAATGTACT
TATATTTTTAGGTCAAATGTTAATGGGAAAATCAGGCGTGATGGTAGCCTCCATTATGGAAGCACTTATGCCGATGATTT
CTATTTGTATCCTATGGGGATATAAGCATGTAAAACCGAAAAAGTATATGATAACGAGCATGCTTATCGCTTTTATAGGG
GCTGTATTTGTTATTACAAAAGGTGATATGAGTTTCTTTTTAACATTGAAAGATAACATGTTTTCGCTAGCATGTATATT
TGTTGGAGTTGTGGGCTGGGTTATTTATACGATGGGTGGTCAAACGTGTAGCGATTGGTCAACATTACGTTATTCTACGT
TGACGTGTGTATTCGGTACGACTGTTACAGGAATTATAACGATAATTATAACGGCGTTTGGATATGTTTCAGTTCCGAGT
ATGGGAACGATTTCTATTGTGAAATACGATTTATTATTTATGATGACATTACCAGGAATAGTAGCGTTACTAGCTTGGAA
CTATGGTGTGAAAATTTTATCGTCCATTAATGGGATTTTATTTATTAATTTTGTACCCATTACAACTTTAGTTATTATGA
TGATGCAAGGATATCAAATAACAATGTTTGATATTGTAGGGACTTTACTTGTTATTGCAGCACTTATTCGTAATAATGTT
TGTCAGAGGAAAGAAGAAAATATCAACAAGAGAATTTTAGAAGAAGAGCAATTACGTCAAGCTGTTTAA

Upstream 100 bases:

>100_bases
GCTCTGGAAGATTTGCAAGTCTCTTAATTCCATAATACTGTCCTCCTTGATGTTAACTATCATTATAAATGATAGTTAAT
ATCATTTTGAATCATTTTAC

Downstream 100 bases:

>100_bases
TAGGCAATTGGAGGATTTTACATGTTAGAAAGTTTATTGTTTTTCTTTGCCGTCGGAGTTGCTTGTGAGCTTGCAGCAAT
TAATCGAAATGGTCGTAAGA

Product: DMT family permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MIYFFFYNSLCANRKKRGIVVRRGQMIIGALACLIASMSWGAMFPVADHALEYIDPFYFSLIRYGAVAIMLIILLLMKEG
KQAFRLEGRGKLLVFFGTMAFTVYNVLIFLGQMLMGKSGVMVASIMEALMPMISICILWGYKHVKPKKYMITSMLIAFIG
AVFVITKGDMSFFLTLKDNMFSLACIFVGVVGWVIYTMGGQTCSDWSTLRYSTLTCVFGTTVTGIITIIITAFGYVSVPS
MGTISIVKYDLLFMMTLPGIVALLAWNYGVKILSSINGILFINFVPITTLVIMMMQGYQITMFDIVGTLLVIAALIRNNV
CQRKEENINKRILEEEQLRQAV

Sequences:

>Translated_342_residues
MIYFFFYNSLCANRKKRGIVVRRGQMIIGALACLIASMSWGAMFPVADHALEYIDPFYFSLIRYGAVAIMLIILLLMKEG
KQAFRLEGRGKLLVFFGTMAFTVYNVLIFLGQMLMGKSGVMVASIMEALMPMISICILWGYKHVKPKKYMITSMLIAFIG
AVFVITKGDMSFFLTLKDNMFSLACIFVGVVGWVIYTMGGQTCSDWSTLRYSTLTCVFGTTVTGIITIIITAFGYVSVPS
MGTISIVKYDLLFMMTLPGIVALLAWNYGVKILSSINGILFINFVPITTLVIMMMQGYQITMFDIVGTLLVIAALIRNNV
CQRKEENINKRILEEEQLRQAV
>Mature_342_residues
MIYFFFYNSLCANRKKRGIVVRRGQMIIGALACLIASMSWGAMFPVADHALEYIDPFYFSLIRYGAVAIMLIILLLMKEG
KQAFRLEGRGKLLVFFGTMAFTVYNVLIFLGQMLMGKSGVMVASIMEALMPMISICILWGYKHVKPKKYMITSMLIAFIG
AVFVITKGDMSFFLTLKDNMFSLACIFVGVVGWVIYTMGGQTCSDWSTLRYSTLTCVFGTTVTGIITIIITAFGYVSVPS
MGTISIVKYDLLFMMTLPGIVALLAWNYGVKILSSINGILFINFVPITTLVIMMMQGYQITMFDIVGTLLVIAALIRNNV
CQRKEENINKRILEEEQLRQAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 38316; Mature: 38316

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
7.3 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
7.3 %Met     (Mature Protein)
9.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYFFFYNSLCANRKKRGIVVRRGQMIIGALACLIASMSWGAMFPVADHALEYIDPFYFS
CEEEEEEHHHHHCCHHCCEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LIRYGAVAIMLIILLLMKEGKQAFRLEGRGKLLVFFGTMAFTVYNVLIFLGQMLMGKSGV
HHHHHHHHHHHHHHHHHHCCCHHEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCH
MVASIMEALMPMISICILWGYKHVKPKKYMITSMLIAFIGAVFVITKGDMSFFLTLKDNM
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCH
FSLACIFVGVVGWVIYTMGGQTCSDWSTLRYSTLTCVFGTTVTGIITIIITAFGYVSVPS
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
MGTISIVKYDLLFMMTLPGIVALLAWNYGVKILSSINGILFINFVPITTLVIMMMQGYQI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCC
TMFDIVGTLLVIAALIRNNVCQRKEENINKRILEEEQLRQAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIYFFFYNSLCANRKKRGIVVRRGQMIIGALACLIASMSWGAMFPVADHALEYIDPFYFS
CEEEEEEHHHHHCCHHCCEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LIRYGAVAIMLIILLLMKEGKQAFRLEGRGKLLVFFGTMAFTVYNVLIFLGQMLMGKSGV
HHHHHHHHHHHHHHHHHHCCCHHEEECCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCH
MVASIMEALMPMISICILWGYKHVKPKKYMITSMLIAFIGAVFVITKGDMSFFLTLKDNM
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCEEEEEECCCH
FSLACIFVGVVGWVIYTMGGQTCSDWSTLRYSTLTCVFGTTVTGIITIIITAFGYVSVPS
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
MGTISIVKYDLLFMMTLPGIVALLAWNYGVKILSSINGILFINFVPITTLVIMMMQGYQI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCC
TMFDIVGTLLVIAALIRNNVCQRKEENINKRILEEEQLRQAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]