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The map label for this gene is oppA [H]

Identifier: 118475954

GI number: 118475954

Start: 196476

End: 198086

Strand: Direct

Name: oppA [H]

Synonym: BALH_0188

Alternate gene names: 118475954

Gene position: 196476-198086 (Clockwise)

Preceding gene: 118475953

Following gene: 118475956

Centisome position: 3.74

GC content: 32.46

Gene sequence:

>1611_bases
ATGAAGAAGTTTTTATTATTTGTCATTATGACCGTATTAGCAATTACTTCTGTCGCTTGCGGTAAGAAAGAGACGCAAAA
GGCAAGTGCTGGTAAGGGAGAAGGAGATCGATTAGTAACGAATATTAGTAGTGATCCATATACTCTTGATGCTGCTATTT
CGACAGATAGCACGTCAGGTTATGTAATTGGACATTTATTCTCAAGTTTATATACGCAAGATAGTGATGGGAAATATCAA
AATGAATTAGCAGAGAAAGAAGAAGTAAATGCTGATGGAACGGAGTATACAATTCATTTAAAGAAAGATATTAAATGGTC
AGATGGTTCTCCTATTACAGCAAATGACTTTGAATTTGCATGGAAGCGATTATTAAATCCGAAAACGGGTTCTATGAATG
CTACAGAAATGTATTTTATTAAAGGGGCAGAGGCATATAATACTGGAAAAGGTGAAGAAGGCCAAGTTGGTATTCAAGTT
GTTGATCCTCAAACATTAAAGATAACACTTGAGCACCCTGTTTCTTCTATTAAACAAAAGTTAGCAAGTTCATTATTTAT
TCCATTATCTAAAAAATCAATTGATGATAATAATAAATTAAAAACAAATCCAAAAGAGTTAATTACGAACGGACCATTCA
CGTTAAAAGAATGGAAGCATAACCAAGCTATTACAGTGCAAAAAAACAAAGAATATTATGATAAAAAGGTGACATTAAAA
GAAATTGAGTTTCGCATTATTCCAGACTCTAAAACAGCGTACCAATTGTACAAATCAAAAGAATTAGATTTACTAAGTGG
TTTACCACAAGAGATGATTGAGAAAGAAAAAGGAAATAAAGAATATAAGCGTGTTGCAGGATTCTCATCTTATATTTATT
CGTTTAATGTAGAAAAAGAGCCATTCACAAATGCGAAAGTGCGTAAAGCCTTTTCATTAGCAGTTGATCGTAAGTTTATC
GTTGAAAAACTGTATAAGAATAATGCACAAGAAGCATATGCATTCGTTCCAGAAGGAGCAAAAACACAAGGTGGTCGTGA
TTTCCGTAAAGAAAAAGGCGATTATGTTAAATTCGATCCGGCAGAAGCGAAAAAATTATTAGAAGAGGGTATGAAAGAAC
AAGGTTGGTCTACATTACCTGCAGTAACATTGAAATTCACTACAGATACACAACATAAAAAAGTAGCAGAAGCAATGCAA
GAAATGTTTAAGAAAAATCTTGGCGTAGATATTAAGTTAGAAAATAAAGAGTGGAAGAGTTACATCGATACATATAAGCA
AAGTGATTTTCAATTAGCTTATATGGGATGGGGAGGTTCTTTACTAGATCCAATTACTAAACTAGATTTATATGCAGGTG
ATGGTCCGAATAACTATGCAAAATGGCATAATAAAGAATTTGATGCTTTAGTAAAAGAAGCCGAAGTTGAACAAAACGAA
GATAAACGTTTTGACTTATTGCATAAAGCAGAAGATATTATGTTTACAGATTCACCGTTAATCCCAATTATATTCCCTTC
TGATTCTTATTTACAAAAAGAATCAGTATCTGGACTTCAATATTATGTTGGATCTAAACCAGATTTAAGATATGTAAAAA
TAAAGAAGTAG

Upstream 100 bases:

>100_bases
TTCGGAAATACGGACGAAGTATTCCGTAATCCACAACATTCTTATACAAAAACATTATTAGCATCAACACCAAAAATTTC
AGGGTAAAGGGGAATGTAAG

Downstream 100 bases:

>100_bases
GCAACCGCCTACTTCTTTATTTTATTTCTCTTTTATATTCTTTTTTCGTTCCATCAGAGAAGACAACTTCTAACTCGAAT
TTTTGATAGTCTTTATCAAG

Product: oligopeptide transporter, periplasmic-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 536; Mature: 536

Protein sequence:

>536_residues
MKKFLLFVIMTVLAITSVACGKKETQKASAGKGEGDRLVTNISSDPYTLDAAISTDSTSGYVIGHLFSSLYTQDSDGKYQ
NELAEKEEVNADGTEYTIHLKKDIKWSDGSPITANDFEFAWKRLLNPKTGSMNATEMYFIKGAEAYNTGKGEEGQVGIQV
VDPQTLKITLEHPVSSIKQKLASSLFIPLSKKSIDDNNKLKTNPKELITNGPFTLKEWKHNQAITVQKNKEYYDKKVTLK
EIEFRIIPDSKTAYQLYKSKELDLLSGLPQEMIEKEKGNKEYKRVAGFSSYIYSFNVEKEPFTNAKVRKAFSLAVDRKFI
VEKLYKNNAQEAYAFVPEGAKTQGGRDFRKEKGDYVKFDPAEAKKLLEEGMKEQGWSTLPAVTLKFTTDTQHKKVAEAMQ
EMFKKNLGVDIKLENKEWKSYIDTYKQSDFQLAYMGWGGSLLDPITKLDLYAGDGPNNYAKWHNKEFDALVKEAEVEQNE
DKRFDLLHKAEDIMFTDSPLIPIIFPSDSYLQKESVSGLQYYVGSKPDLRYVKIKK

Sequences:

>Translated_536_residues
MKKFLLFVIMTVLAITSVACGKKETQKASAGKGEGDRLVTNISSDPYTLDAAISTDSTSGYVIGHLFSSLYTQDSDGKYQ
NELAEKEEVNADGTEYTIHLKKDIKWSDGSPITANDFEFAWKRLLNPKTGSMNATEMYFIKGAEAYNTGKGEEGQVGIQV
VDPQTLKITLEHPVSSIKQKLASSLFIPLSKKSIDDNNKLKTNPKELITNGPFTLKEWKHNQAITVQKNKEYYDKKVTLK
EIEFRIIPDSKTAYQLYKSKELDLLSGLPQEMIEKEKGNKEYKRVAGFSSYIYSFNVEKEPFTNAKVRKAFSLAVDRKFI
VEKLYKNNAQEAYAFVPEGAKTQGGRDFRKEKGDYVKFDPAEAKKLLEEGMKEQGWSTLPAVTLKFTTDTQHKKVAEAMQ
EMFKKNLGVDIKLENKEWKSYIDTYKQSDFQLAYMGWGGSLLDPITKLDLYAGDGPNNYAKWHNKEFDALVKEAEVEQNE
DKRFDLLHKAEDIMFTDSPLIPIIFPSDSYLQKESVSGLQYYVGSKPDLRYVKIKK
>Mature_536_residues
MKKFLLFVIMTVLAITSVACGKKETQKASAGKGEGDRLVTNISSDPYTLDAAISTDSTSGYVIGHLFSSLYTQDSDGKYQ
NELAEKEEVNADGTEYTIHLKKDIKWSDGSPITANDFEFAWKRLLNPKTGSMNATEMYFIKGAEAYNTGKGEEGQVGIQV
VDPQTLKITLEHPVSSIKQKLASSLFIPLSKKSIDDNNKLKTNPKELITNGPFTLKEWKHNQAITVQKNKEYYDKKVTLK
EIEFRIIPDSKTAYQLYKSKELDLLSGLPQEMIEKEKGNKEYKRVAGFSSYIYSFNVEKEPFTNAKVRKAFSLAVDRKFI
VEKLYKNNAQEAYAFVPEGAKTQGGRDFRKEKGDYVKFDPAEAKKLLEEGMKEQGWSTLPAVTLKFTTDTQHKKVAEAMQ
EMFKKNLGVDIKLENKEWKSYIDTYKQSDFQLAYMGWGGSLLDPITKLDLYAGDGPNNYAKWHNKEFDALVKEAEVEQNE
DKRFDLLHKAEDIMFTDSPLIPIIFPSDSYLQKESVSGLQYYVGSKPDLRYVKIKK

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the binding of dipeptides with high affinity. Is expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1789397, Length=497, Percent_Identity=31.9919517102616, Blast_Score=236, Evalue=2e-63,
Organism=Escherichia coli, GI87081878, Length=546, Percent_Identity=29.4871794871795, Blast_Score=231, Evalue=7e-62,
Organism=Escherichia coli, GI1787495, Length=513, Percent_Identity=31.1890838206628, Blast_Score=230, Evalue=2e-61,
Organism=Escherichia coli, GI1789966, Length=439, Percent_Identity=28.246013667426, Blast_Score=150, Evalue=2e-37,
Organism=Escherichia coli, GI1787052, Length=505, Percent_Identity=25.7425742574257, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1787762, Length=491, Percent_Identity=24.0325865580448, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI1789887, Length=400, Percent_Identity=24.75, Blast_Score=88, Evalue=2e-18,
Organism=Escherichia coli, GI1787551, Length=475, Percent_Identity=20.2105263157895, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 60876; Mature: 60876

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01040 SBP_BACTERIAL_5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFLLFVIMTVLAITSVACGKKETQKASAGKGEGDRLVTNISSDPYTLDAAISTDSTSG
CHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCC
YVIGHLFSSLYTQDSDGKYQNELAEKEEVNADGTEYTIHLKKDIKWSDGSPITANDFEFA
EEHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHH
WKRLLNPKTGSMNATEMYFIKGAEAYNTGKGEEGQVGIQVVDPQTLKITLEHPVSSIKQK
HHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCEEEEEEHHHHHHHHHH
LASSLFIPLSKKSIDDNNKLKTNPKELITNGPFTLKEWKHNQAITVQKNKEYYDKKVTLK
HHHHEECCCCCCCCCCCCCCCCCHHHHHCCCCEEHHHCCCCCEEEEECCCHHHHHCEEEE
EIEFRIIPDSKTAYQLYKSKELDLLSGLPQEMIEKEKGNKEYKRVAGFSSYIYSFNVEKE
EEEEEEECCCCHHHHHHHCCCCHHHHCCCHHHHHHHCCCHHHHHHHHHHHEEEEECCCCC
PFTNAKVRKAFSLAVDRKFIVEKLYKNNAQEAYAFVPEGAKTQGGRDFRKEKGDYVKFDP
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHCCCCEEEECH
AEAKKLLEEGMKEQGWSTLPAVTLKFTTDTQHKKVAEAMQEMFKKNLGVDIKLENKEWKS
HHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCEEEEECCHHHHH
YIDTYKQSDFQLAYMGWGGSLLDPITKLDLYAGDGPNNYAKWHNKEFDALVKEAEVEQNE
HHHHHCCCCCEEEEEECCCHHHHHHHHHEEEECCCCCCCHHCCCCHHHHHHHHHHCCCCC
DKRFDLLHKAEDIMFTDSPLIPIIFPSDSYLQKESVSGLQYYVGSKPDLRYVKIKK
CHHHHHHHHHHHEEEECCCEEEEEECCCHHHHHHHCCCCEEECCCCCCEEEEEEEC
>Mature Secondary Structure
MKKFLLFVIMTVLAITSVACGKKETQKASAGKGEGDRLVTNISSDPYTLDAAISTDSTSG
CHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCC
YVIGHLFSSLYTQDSDGKYQNELAEKEEVNADGTEYTIHLKKDIKWSDGSPITANDFEFA
EEHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHH
WKRLLNPKTGSMNATEMYFIKGAEAYNTGKGEEGQVGIQVVDPQTLKITLEHPVSSIKQK
HHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCEEEEEEHHHHHHHHHH
LASSLFIPLSKKSIDDNNKLKTNPKELITNGPFTLKEWKHNQAITVQKNKEYYDKKVTLK
HHHHEECCCCCCCCCCCCCCCCCHHHHHCCCCEEHHHCCCCCEEEEECCCHHHHHCEEEE
EIEFRIIPDSKTAYQLYKSKELDLLSGLPQEMIEKEKGNKEYKRVAGFSSYIYSFNVEKE
EEEEEEECCCCHHHHHHHCCCCHHHHCCCHHHHHHHCCCHHHHHHHHHHHEEEEECCCCC
PFTNAKVRKAFSLAVDRKFIVEKLYKNNAQEAYAFVPEGAKTQGGRDFRKEKGDYVKFDP
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHCCCCEEEECH
AEAKKLLEEGMKEQGWSTLPAVTLKFTTDTQHKKVAEAMQEMFKKNLGVDIKLENKEWKS
HHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCEEEEECCHHHHH
YIDTYKQSDFQLAYMGWGGSLLDPITKLDLYAGDGPNNYAKWHNKEFDALVKEAEVEQNE
HHHHHCCCCCEEEEEECCCHHHHHHHHHEEEECCCCCCCHHCCCCHHHHHHHHHHCCCCC
DKRFDLLHKAEDIMFTDSPLIPIIFPSDSYLQKESVSGLQYYVGSKPDLRYVKIKK
CHHHHHHHHHHHEEEECCCEEEEEECCCHHHHHHHCCCCEEECCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377 [H]