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The map label for this gene is oppC [H]

Identifier: 118475951

GI number: 118475951

Start: 193721

End: 194725

Strand: Direct

Name: oppC [H]

Synonym: BALH_0185

Alternate gene names: 118475951

Gene position: 193721-194725 (Clockwise)

Preceding gene: 118475950

Following gene: 118475952

Centisome position: 3.68

GC content: 38.31

Gene sequence:

>1005_bases
ATGGGGGCTTATGAAATTAATAATCAGTTATTAACGAATGAAGAGAAAAAAGAATTAACGATAAATAAAGATCAGCAAAA
GATTAGCCGAAAGAAAGAAGTGTTTCGTAAGTTTGTATCGAATCCAATCGCAGTTTTAGGATCAGTGACGTTATTACTCA
TTATTGTTTTCTCGCTTATTGGTGAAAGTTTAACGCCATTTACTGCGAGTGAACAGGTAAAAGAGGCAACAAACTTACCA
CCGAGTAGTGAGCATTGGTTCGGAACCGATGATTTAGGTAGAGATATTTGGGCGCGTACTTGGGCTGGCGGGAAAATTTC
ACTAACAGTTGGGTTAGTAGCAGCAGCTCTAGACATAGGGCTTGGTGTGCTAATTGGAGGTTTTAGTGGATATGTAAGAG
GACGTAATCGTCTTGGAACGTTAATTGATGAGTGGATTATAAGAGGGATTGAAGTGCTATATGGCATCCCATATTTATTA
ATTGTTATTTTACTATTAATCGTTATGAAACCAGGACTCTTTACAATTATAATCGCTCTTGCGTTGACGGGGTGGATTGG
CATGGCACGTCTCATTCGGGCGCAAGTCTTATCTTTAAAGCAAAGAGAATTTGTTATTGCAGCAGAACGATTAGGCACAT
CTCATATGAAAATTATATATGGACATTTAATTCCAAACTTAACAGGAATTATTATCGTAAATTTATCATTTACAATTCCA
GCAGCTATTTTCTCAGAATCATTTTTAAGCTTTATCGGACTGGGAGTACAATCACCAGCGGCAAGCTGGGGAACAATGAC
GAATGATGCGCTTGGGACATTATTAAGCGGAGAATGGTGGCAACTTTTCTTCCCAGCAATCATGATTGCACTCATCATGT
TCGCATTTAATGCAATTGGTGATGGTTTGCAAGATGCAATTGATCCGAAAATCGTAAAACGGAATCGAAAGGAGAAAAAA
CATGGCGCAAGTCTTATCGTTAGAAAACGTAACATTAGCCGTTGA

Upstream 100 bases:

>100_bases
TATAGTGCACTTTTAATCTTATGTATTTTTATTACAGATATTATTCACCGTATTGTTGATCCACGTATTCGTTCTATTAC
GTAAGGAGGGGGATGTTTAG

Downstream 100 bases:

>100_bases
AAAAGAGAATAGTAAGCAAGCGATTGTGAAACATGTTTCCTTTTTTATTAACGAAGGTGAAATAGTGGCACTTGTAGGAG
AGAGTGGCTCTGGAAAAAGT

Product: oligopeptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MGAYEINNQLLTNEEKKELTINKDQQKISRKKEVFRKFVSNPIAVLGSVTLLLIIVFSLIGESLTPFTASEQVKEATNLP
PSSEHWFGTDDLGRDIWARTWAGGKISLTVGLVAAALDIGLGVLIGGFSGYVRGRNRLGTLIDEWIIRGIEVLYGIPYLL
IVILLLIVMKPGLFTIIIALALTGWIGMARLIRAQVLSLKQREFVIAAERLGTSHMKIIYGHLIPNLTGIIIVNLSFTIP
AAIFSESFLSFIGLGVQSPAASWGTMTNDALGTLLSGEWWQLFFPAIMIALIMFAFNAIGDGLQDAIDPKIVKRNRKEKK
HGASLIVRKRNISR

Sequences:

>Translated_334_residues
MGAYEINNQLLTNEEKKELTINKDQQKISRKKEVFRKFVSNPIAVLGSVTLLLIIVFSLIGESLTPFTASEQVKEATNLP
PSSEHWFGTDDLGRDIWARTWAGGKISLTVGLVAAALDIGLGVLIGGFSGYVRGRNRLGTLIDEWIIRGIEVLYGIPYLL
IVILLLIVMKPGLFTIIIALALTGWIGMARLIRAQVLSLKQREFVIAAERLGTSHMKIIYGHLIPNLTGIIIVNLSFTIP
AAIFSESFLSFIGLGVQSPAASWGTMTNDALGTLLSGEWWQLFFPAIMIALIMFAFNAIGDGLQDAIDPKIVKRNRKEKK
HGASLIVRKRNISR
>Mature_333_residues
GAYEINNQLLTNEEKKELTINKDQQKISRKKEVFRKFVSNPIAVLGSVTLLLIIVFSLIGESLTPFTASEQVKEATNLPP
SSEHWFGTDDLGRDIWARTWAGGKISLTVGLVAAALDIGLGVLIGGFSGYVRGRNRLGTLIDEWIIRGIEVLYGIPYLLI
VILLLIVMKPGLFTIIIALALTGWIGMARLIRAQVLSLKQREFVIAAERLGTSHMKIIYGHLIPNLTGIIIVNLSFTIPA
AIFSESFLSFIGLGVQSPAASWGTMTNDALGTLLSGEWWQLFFPAIMIALIMFAFNAIGDGLQDAIDPKIVKRNRKEKKH
GASLIVRKRNISR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane. Is expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=296, Percent_Identity=34.4594594594595, Blast_Score=176, Evalue=2e-45,
Organism=Escherichia coli, GI1787498, Length=281, Percent_Identity=38.0782918149466, Blast_Score=173, Evalue=1e-44,
Organism=Escherichia coli, GI1787760, Length=301, Percent_Identity=32.890365448505, Blast_Score=158, Evalue=5e-40,
Organism=Escherichia coli, GI1789889, Length=246, Percent_Identity=34.1463414634146, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1789964, Length=286, Percent_Identity=32.8671328671329, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1788505, Length=234, Percent_Identity=31.6239316239316, Blast_Score=110, Evalue=9e-26,
Organism=Escherichia coli, GI1787549, Length=295, Percent_Identity=27.4576271186441, Blast_Score=105, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36797; Mature: 36666

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAYEINNQLLTNEEKKELTINKDQQKISRKKEVFRKFVSNPIAVLGSVTLLLIIVFSLI
CCCCCCCCCHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GESLTPFTASEQVKEATNLPPSSEHWFGTDDLGRDIWARTWAGGKISLTVGLVAAALDIG
CCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHH
LGVLIGGFSGYVRGRNRLGTLIDEWIIRGIEVLYGIPYLLIVILLLIVMKPGLFTIIIAL
HHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHH
ALTGWIGMARLIRAQVLSLKQREFVIAAERLGTSHMKIIYGHLIPNLTGIIIVNLSFTIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEHHHHH
AAIFSESFLSFIGLGVQSPAASWGTMTNDALGTLLSGEWWQLFFPAIMIALIMFAFNAIG
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
DGLQDAIDPKIVKRNRKEKKHGASLIVRKRNISR
CHHHHHCCHHHHHHHHHHHHCCHHEEEECCCCCC
>Mature Secondary Structure 
GAYEINNQLLTNEEKKELTINKDQQKISRKKEVFRKFVSNPIAVLGSVTLLLIIVFSLI
CCCCCCCCHHCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
GESLTPFTASEQVKEATNLPPSSEHWFGTDDLGRDIWARTWAGGKISLTVGLVAAALDIG
CCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHH
LGVLIGGFSGYVRGRNRLGTLIDEWIIRGIEVLYGIPYLLIVILLLIVMKPGLFTIIIAL
HHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHH
ALTGWIGMARLIRAQVLSLKQREFVIAAERLGTSHMKIIYGHLIPNLTGIIIVNLSFTIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEHHHHH
AAIFSESFLSFIGLGVQSPAASWGTMTNDALGTLLSGEWWQLFFPAIMIALIMFAFNAIG
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC
DGLQDAIDPKIVKRNRKEKKHGASLIVRKRNISR
CHHHHHCCHHHHHHHHHHHHCCHHEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377; 3145906 [H]