| Definition | Bacillus thuringiensis str. Al Hakam chromosome, complete genome. |
|---|---|
| Accession | NC_008600 |
| Length | 5,257,091 |
Click here to switch to the map view.
The map label for this gene is ybbP [H]
Identifier: 118475921
GI number: 118475921
Start: 159474
End: 160295
Strand: Direct
Name: ybbP [H]
Synonym: BALH_0152
Alternate gene names: 118475921
Gene position: 159474-160295 (Clockwise)
Preceding gene: 118475920
Following gene: 118475922
Centisome position: 3.03
GC content: 38.69
Gene sequence:
>822_bases ATGCCTTTTGAAGATACGACCATTTTGGAATATGTTAGTACGGCATTAGATATTGCCGTTGTATGGTTTATTATATATAA GCTAATTCTCATAATCCGAGGGACGAAAGCTGTTCAACTTTTAAAAGGTATTACAGTTATTATTGTCGTTCGGATGATTA GTATTTTCCTTGGATTACGTACGCTATATTGGTTAACTGAGCAAGTATTAACGTGGGGATTTTTAGCCGTTATTATTATT TTTCAGCCAGAATTGCGAAGAGCACTTGAGCAGCTAGGACGCGGGAGTTTATTTTCACGTACTGGAACTCATGAGGATGA TGAGCCTGAAATGGTTGCAACAGCGATAGCAAAAGCAACGGAATATATGGGAAAACGTAGAATAGGCGCATTAATTACCT TGTCAAAAGAGACCGGTATGGGTGATTATGTGGAAACAGGTATTCCGCTAAATGCAAACGTATCATCGGAATTACTCATT AATATTTTCATTCCTAATACACCTCTTCACGATGGAGCGGTCATTATGCAAGGAAGTACCATTAAAGCAGCAGCGTGTTA TCTTCCCTTATCGGAAAGTCCGTTTATCTCTAAGGAACTAGGAACTAGGCATCGCGCCGCAATGGGAGTTAGTGAAGTTA CTGATAGTATTACAGTAGTTGTGTCGGAAGAAACTGGCCAAATTTCTTTAACGAAAAATGGTAAGTTGCATCGTGATTTG AAGACAGAACAATTGAAAGATATGTTGTTAGCTGAATTTAGTGCGAACGAAAAAACGACTTCTTCGTCTTTATGGAATTG GAGGAGAAAGCGTCATGGATAA
Upstream 100 bases:
>100_bases TGGTATAATTAACTAGTTGTTGGAAATACATACAGATAGAGCATAAAATAATATTTCAATATATGGATAGAATTGCTCGT AAGTAGGAGGAAGGGTTAGC
Downstream 100 bases:
>100_bases GTTAATGGAGAATCATTGGTTTCTAAAAGGGATCTCATTACTATTGGCGTGTATGCTTTTTATGTCAGCGACTTTAACTG AAAAAAATACGACATCGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 272
Protein sequence:
>273_residues MPFEDTTILEYVSTALDIAVVWFIIYKLILIIRGTKAVQLLKGITVIIVVRMISIFLGLRTLYWLTEQVLTWGFLAVIII FQPELRRALEQLGRGSLFSRTGTHEDDEPEMVATAIAKATEYMGKRRIGALITLSKETGMGDYVETGIPLNANVSSELLI NIFIPNTPLHDGAVIMQGSTIKAAACYLPLSESPFISKELGTRHRAAMGVSEVTDSITVVVSEETGQISLTKNGKLHRDL KTEQLKDMLLAEFSANEKTTSSSLWNWRRKRHG
Sequences:
>Translated_273_residues MPFEDTTILEYVSTALDIAVVWFIIYKLILIIRGTKAVQLLKGITVIIVVRMISIFLGLRTLYWLTEQVLTWGFLAVIII FQPELRRALEQLGRGSLFSRTGTHEDDEPEMVATAIAKATEYMGKRRIGALITLSKETGMGDYVETGIPLNANVSSELLI NIFIPNTPLHDGAVIMQGSTIKAAACYLPLSESPFISKELGTRHRAAMGVSEVTDSITVVVSEETGQISLTKNGKLHRDL KTEQLKDMLLAEFSANEKTTSSSLWNWRRKRHG >Mature_272_residues PFEDTTILEYVSTALDIAVVWFIIYKLILIIRGTKAVQLLKGITVIIVVRMISIFLGLRTLYWLTEQVLTWGFLAVIIIF QPELRRALEQLGRGSLFSRTGTHEDDEPEMVATAIAKATEYMGKRRIGALITLSKETGMGDYVETGIPLNANVSSELLIN IFIPNTPLHDGAVIMQGSTIKAAACYLPLSESPFISKELGTRHRAAMGVSEVTDSITVVVSEETGQISLTKNGKLHRDLK TEQLKDMLLAEFSANEKTTSSSLWNWRRKRHG
Specific function: Unknown
COG id: COG1624
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014046 - InterPro: IPR003390 [H]
Pfam domain/function: PF02457 DisA_N [H]
EC number: NA
Molecular weight: Translated: 30397; Mature: 30266
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFEDTTILEYVSTALDIAVVWFIIYKLILIIRGTKAVQLLKGITVIIVVRMISIFLGLR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH TLYWLTEQVLTWGFLAVIIIFQPELRRALEQLGRGSLFSRTGTHEDDEPEMVATAIAKAT HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHH EYMGKRRIGALITLSKETGMGDYVETGIPLNANVSSELLINIFIPNTPLHDGAVIMQGST HHHHHHHHCEEEEEECCCCCCCHHHCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCC IKAAACYLPLSESPFISKELGTRHRAAMGVSEVTDSITVVVSEETGQISLTKNGKLHRDL EEEHEEEECCCCCCCCHHHHCCHHHHHHCHHHHCCCEEEEEECCCCEEEEECCCCCHHHH KTEQLKDMLLAEFSANEKTTSSSLWNWRRKRHG HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure PFEDTTILEYVSTALDIAVVWFIIYKLILIIRGTKAVQLLKGITVIIVVRMISIFLGLR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH TLYWLTEQVLTWGFLAVIIIFQPELRRALEQLGRGSLFSRTGTHEDDEPEMVATAIAKAT HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHH EYMGKRRIGALITLSKETGMGDYVETGIPLNANVSSELLINIFIPNTPLHDGAVIMQGST HHHHHHHHCEEEEEECCCCCCCHHHCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCC IKAAACYLPLSESPFISKELGTRHRAAMGVSEVTDSITVVVSEETGQISLTKNGKLHRDL EEEHEEEECCCCCCCCHHHHCCHHHHHHCHHHHCCCEEEEEECCCCEEEEECCCCCHHHH KTEQLKDMLLAEFSANEKTTSSSLWNWRRKRHG HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274029; 9384377 [H]