Definition | Aeropyrum pernix K1, complete genome. |
---|---|
Accession | NC_000854 |
Length | 1,669,696 |
Click here to switch to the map view.
The map label for this gene is rpoD
Identifier: 118431575
GI number:
Start: 1101210
End: 1102070
Strand: Direct
Name: rpoD
Synonym: APE_1744.1
Alternate gene names: NA
Gene position: NA
Preceding gene: 118431574
Following gene: 14601599
Centisome position: NA
GC content: NA
Gene sequence:
>861_bases GTGGCTGAGACCGGGGATCGTAGTGTAGAAGTGGTTGAGCTGGATAGCCTCAGGGTGAGGCTTAGGATAAGGGGTTATCC TGTCGTCTTCGTTAACGCTATACGCAGGACAGTTTTGAGCGATGTACCCACAATGGCTGTAGACTACGCCTACATATTCG ACAACACTACGGCGGTTTACGACGAGATGGTAGCACACAGGCTAGGTCTGGTCGTTCTCGACAGCAACGAGGCTGTCGAG AAGTATAGGAGGCCTGAGGAGTGTGCTGGCAAGGAGCCGAGCGAGGAGGACTGCTTCGTCGAGGTTAGCCTTGAGGCTGA GGTTGATGCCGAGGGAGAAACGGGCAGGTACATTACTGCCGGGGACTTGTCGATAAGCGATCCCCAGGTGAAGCCTGTCT ACCCTGAGACCCCCCTCATCTACGTAGCACCGGGCCAGAGGATCCACGTACAGGCTTTTGCACGCCTAGGCAGGGGGAAG GAGCACACTAAATGGTCTCCCGCCAGCCTATCAGTACTCAGGTACACGCCCATCCTCATATACGACAGCTCCAAAGCAGG TGATGAGTGTCTAGAATGCCTCTCAGCCTACCCGCAGGTTGTAGAGGCCCTCAAATCAGGGGGTAAGGGGAGCCTCGTTC TGGAAGGTCTGAGGAGGACCAGCGGGCTCAGGTACTGCGCTGAGACGGCTTGCCGCGGCGCTGTGGAGGTGCGTTATGAC AGTAGCAACCTCGACCTCGAGGTGGAGTCTACAGGCGCCCTCAGGCCCGAGAAGATAGTTGAGCTCGCGATCAGAGAGCT TGAGGAGAAAGTTAAGAGGTTTGCAGAGGCCGTAGAGAGTGTGGGTGTAGAGGAGTCATGA
Upstream 100 bases:
>100_bases AGGAGGGGTAGGAGAGTCTAGCCGCCTGCTCTCTGGCCTTGTCCTCCACTTGTTTTAGCCTTATGGTTCCGAGGTCCGTG GTTACGGGGTGTCTATGCAG
Downstream 100 bases:
>100_bases GGCCCACCGGACCCACTAGCCTGGTGACCCGGAGGCTTATAGGCGAGCTCAGGAGGGCTGCGAGGAGGAATTCAGCCCCT GTCTGGCTTAGGGTTGCAGA
Product: DNA-directed RNA polymerase subunit D
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>286_residues MAETGDRSVEVVELDSLRVRLRIRGYPVVFVNAIRRTVLSDVPTMAVDYAYIFDNTTAVYDEMVAHRLGLVVLDSNEAVE KYRRPEECAGKEPSEEDCFVEVSLEAEVDAEGETGRYITAGDLSISDPQVKPVYPETPLIYVAPGQRIHVQAFARLGRGK EHTKWSPASLSVLRYTPILIYDSSKAGDECLECLSAYPQVVEALKSGGKGSLVLEGLRRTSGLRYCAETACRGAVEVRYD SSNLDLEVESTGALRPEKIVELAIRELEEKVKRFAEAVESVGVEES
Sequences:
NA
Specific function: NA
COG id: COG0202
COG function: function code K; DNA-directed RNA polymerase, alpha subunit/40 kD subunit
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA