| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920078
Identifier: 117920078
GI number: 117920078
Start: 1918551
End: 1919516
Strand: Direct
Name: 117920078
Synonym: Shewana3_1631
Alternate gene names: NA
Gene position: 1918551-1919516 (Clockwise)
Preceding gene: 117920077
Following gene: 117920082
Centisome position: 38.59
GC content: 49.07
Gene sequence:
>966_bases ATGTTACAACATCAGAGTGTCGGTCGTTGCACCACATTATTGCTAGGCGCCGTTATCGCAAGTTTGAGTCTTGCTGGCTG CGGCAAAGTCAGCGAAGAGGCGCAAACGACAGCTAAGAGCGCGGTATCTGCTGACACTAAGGCGATAATTGGTCAATCGG AGAAGATGCGCCTAATCACCGCACAACTGGATTTTCAGGCAAGAATTGATACGGGCGCGGCGAATACCTCCTTGCATGCC ATCGATCTGCAAGTTGAAGGCGGTGCATCCGACAAGATGCAGGATAACATAGGTAAAACACTACACTTTACCACCGAAAA TGAGGCGGGTGAGCAGCGGCGCTTAGCAGCGAAAATTTTAAAGACCACCACAGTGAATAACGCTCAAGGCAGTGAAGTGC GCTATCTGGTGGAGTTAGATATTGGTTTTGAGGGCCAGCATCGTCTGGTTGCCGTTAATCTACGTGACCGAAGCCATATG GATTACAAATTACTGATCGGCCGTAATTGGTTAGCGGGACGTTATGTTGTCGATGTGGCCGAGAAACGTCTGATTGGCCC GACGGCTTTTATCAATGTGAAAGAGGCGGAATTGACCTTTAAAACACGCATCGATACCGGCGCGGTTGAAAATTCCCTGC ATGCGGTCGATATCAAGATTGACGATGAAGATCCTACCAATATGGATAACAACATCGGTAAGTGGCTTAATTTCACCACC GAAAATGAGCGTGGTGAGGAAAAGCGGTTAAGGGCACGGATTGTCGATACCTCGCTTATCCGGAACGCGCAGGGGAGTGA AGTGCGTTATATGGTCGAATTGACCTTAGGTGAGCCGGGATTGGAGTATCCCGTCAAAGTGAATCTGAAGGATCGCAGTC AGATGTCCAATAAACTCTTGATTGGGCGTAACTGGCTACAGGGCCATTATCTGGTGGATGTGACCCTCGATAAGTCGAGC GATTAG
Upstream 100 bases:
>100_bases GCTCTTTTCCTGTGCTTTTATGCTATCACTAGCCCCTACATCGACCAAGGTGATGGGGCTCAATGTGGCTGACCCGTCAT CGTTCAGATAAGGAGTGAGG
Downstream 100 bases:
>100_bases TTTCTCTCAATCGGTTTGTGTATAGCCGTGGCTATATCGCAGATAATGGCCAGTGGCACTCAATCAGAGTGCCACGATTG AGCTCACTCTCTACCTTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MLQHQSVGRCTTLLLGAVIASLSLAGCGKVSEEAQTTAKSAVSADTKAIIGQSEKMRLITAQLDFQARIDTGAANTSLHA IDLQVEGGASDKMQDNIGKTLHFTTENEAGEQRRLAAKILKTTTVNNAQGSEVRYLVELDIGFEGQHRLVAVNLRDRSHM DYKLLIGRNWLAGRYVVDVAEKRLIGPTAFINVKEAELTFKTRIDTGAVENSLHAVDIKIDDEDPTNMDNNIGKWLNFTT ENERGEEKRLRARIVDTSLIRNAQGSEVRYMVELTLGEPGLEYPVKVNLKDRSQMSNKLLIGRNWLQGHYLVDVTLDKSS D
Sequences:
>Translated_321_residues MLQHQSVGRCTTLLLGAVIASLSLAGCGKVSEEAQTTAKSAVSADTKAIIGQSEKMRLITAQLDFQARIDTGAANTSLHA IDLQVEGGASDKMQDNIGKTLHFTTENEAGEQRRLAAKILKTTTVNNAQGSEVRYLVELDIGFEGQHRLVAVNLRDRSHM DYKLLIGRNWLAGRYVVDVAEKRLIGPTAFINVKEAELTFKTRIDTGAVENSLHAVDIKIDDEDPTNMDNNIGKWLNFTT ENERGEEKRLRARIVDTSLIRNAQGSEVRYMVELTLGEPGLEYPVKVNLKDRSQMSNKLLIGRNWLQGHYLVDVTLDKSS D >Mature_321_residues MLQHQSVGRCTTLLLGAVIASLSLAGCGKVSEEAQTTAKSAVSADTKAIIGQSEKMRLITAQLDFQARIDTGAANTSLHA IDLQVEGGASDKMQDNIGKTLHFTTENEAGEQRRLAAKILKTTTVNNAQGSEVRYLVELDIGFEGQHRLVAVNLRDRSHM DYKLLIGRNWLAGRYVVDVAEKRLIGPTAFINVKEAELTFKTRIDTGAVENSLHAVDIKIDDEDPTNMDNNIGKWLNFTT ENERGEEKRLRARIVDTSLIRNAQGSEVRYMVELTLGEPGLEYPVKVNLKDRSQMSNKLLIGRNWLQGHYLVDVTLDKSS D
Specific function: Unknown
COG id: COG4067
COG function: function code O; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35535; Mature: 35535
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQHQSVGRCTTLLLGAVIASLSLAGCGKVSEEAQTTAKSAVSADTKAIIGQSEKMRLIT CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCEEEEE AQLDFQARIDTGAANTSLHAIDLQVEGGASDKMQDNIGKTLHFTTENEAGEQRRLAAKIL EEECEEEEECCCCCCCEEEEEEEEECCCCCCCHHHCCCCEEEEEECCCCCHHHHHHHHHH KTTTVNNAQGSEVRYLVELDIGFEGQHRLVAVNLRDRSHMDYKLLIGRNWLAGRYVVDVA HHEECCCCCCCEEEEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEEEEHH EKRLIGPTAFINVKEAELTFKTRIDTGAVENSLHAVDIKIDDEDPTNMDNNIGKWLNFTT HHHCCCCEEEEEEEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHEEECC ENERGEEKRLRARIVDTSLIRNAQGSEVRYMVELTLGEPGLEYPVKVNLKDRSQMSNKLL CCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCEEEEECCHHHCCCEEE IGRNWLQGHYLVDVTLDKSSD EECCCCCCEEEEEEEECCCCC >Mature Secondary Structure MLQHQSVGRCTTLLLGAVIASLSLAGCGKVSEEAQTTAKSAVSADTKAIIGQSEKMRLIT CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCCEEEEE AQLDFQARIDTGAANTSLHAIDLQVEGGASDKMQDNIGKTLHFTTENEAGEQRRLAAKIL EEECEEEEECCCCCCCEEEEEEEEECCCCCCCHHHCCCCEEEEEECCCCCHHHHHHHHHH KTTTVNNAQGSEVRYLVELDIGFEGQHRLVAVNLRDRSHMDYKLLIGRNWLAGRYVVDVA HHEECCCCCCCEEEEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCEEEEHH EKRLIGPTAFINVKEAELTFKTRIDTGAVENSLHAVDIKIDDEDPTNMDNNIGKWLNFTT HHHCCCCEEEEEEEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHEEECC ENERGEEKRLRARIVDTSLIRNAQGSEVRYMVELTLGEPGLEYPVKVNLKDRSQMSNKLL CCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCEEEEECCHHHCCCEEE IGRNWLQGHYLVDVTLDKSSD EECCCCCCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA