| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920039
Identifier: 117920039
GI number: 117920039
Start: 1867839
End: 1868225
Strand: Direct
Name: 117920039
Synonym: Shewana3_1591
Alternate gene names: NA
Gene position: 1867839-1868225 (Clockwise)
Preceding gene: 117920038
Following gene: 117920040
Centisome position: 37.57
GC content: 48.06
Gene sequence:
>387_bases ATGATCAGTTTGGCGATAGCATCAATCCTGAGCGCAGGTGTGTGCGTTTACCACTTACTGGAGGGGAAACAAAAGCGGCT GCCGAAGCTGATGAGTGCGCCATTATCTGAGCCAGATAAGCAGTGGTTCAGCGCGCTATTTTATTGCCAATCGGTATTCT ATGTATCCACTACCGCGGTGTTTTTGGTGTGTGCGCTCAAACTCCTTCCTGAAATGTATGGCTATAGCCTATTGCTGTTT TTGGGGCTTAACTACGGTATGTATGCCATTTGGCTGTTTTACGTGGCGTTGTTATCCCCACCTCAAGCCAGCCTGCGACT CCGTTTGCAATCCTTAGTCTTTTTATTGATAGCCTTGCTTGCGGTGCTGAGTCCACTGCAGGTATAA
Upstream 100 bases:
>100_bases ATTAAGAGTAAGGCTGTTGTAAGAGAGCGTCGCTTTGGCAGGTCTTACTCCCTAGATGAACATGGGCCTAATGGCCGCGA ATAAGGGCGAGAGATAACCA
Downstream 100 bases:
>100_bases ACGCGTTCGTTGAACTAGGATTTCCCCAGCCAATAGACAGTACCTATATCCCTTTGGTTGATTTATGGATAAGGCTGAAG ATTCACTTATCTATTTGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MISLAIASILSAGVCVYHLLEGKQKRLPKLMSAPLSEPDKQWFSALFYCQSVFYVSTTAVFLVCALKLLPEMYGYSLLLF LGLNYGMYAIWLFYVALLSPPQASLRLRLQSLVFLLIALLAVLSPLQV
Sequences:
>Translated_128_residues MISLAIASILSAGVCVYHLLEGKQKRLPKLMSAPLSEPDKQWFSALFYCQSVFYVSTTAVFLVCALKLLPEMYGYSLLLF LGLNYGMYAIWLFYVALLSPPQASLRLRLQSLVFLLIALLAVLSPLQV >Mature_128_residues MISLAIASILSAGVCVYHLLEGKQKRLPKLMSAPLSEPDKQWFSALFYCQSVFYVSTTAVFLVCALKLLPEMYGYSLLLF LGLNYGMYAIWLFYVALLSPPQASLRLRLQSLVFLLIALLAVLSPLQV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14297; Mature: 14297
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISLAIASILSAGVCVYHLLEGKQKRLPKLMSAPLSEPDKQWFSALFYCQSVFYVSTTAV CHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH FLVCALKLLPEMYGYSLLLFLGLNYGMYAIWLFYVALLSPPQASLRLRLQSLVFLLIALL HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH AVLSPLQV HHHHHCCC >Mature Secondary Structure MISLAIASILSAGVCVYHLLEGKQKRLPKLMSAPLSEPDKQWFSALFYCQSVFYVSTTAV CHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH FLVCALKLLPEMYGYSLLLFLGLNYGMYAIWLFYVALLSPPQASLRLRLQSLVFLLIALL HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH AVLSPLQV HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA