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The map label for this gene is ydgG [C]

Identifier: 117919992

GI number: 117919992

Start: 1801289

End: 1802395

Strand: Direct

Name: ydgG [C]

Synonym: Shewana3_1544

Alternate gene names: 117919992

Gene position: 1801289-1802395 (Clockwise)

Preceding gene: 117919988

Following gene: 117919993

Centisome position: 36.23

GC content: 49.68

Gene sequence:

>1107_bases
ATGACACGTTCCAATACGCCGTCTGCCGCTTACAAAGGTTTTGCCGTCATGGCCTTTGTGGTGATTATTTTGGCAGGGAT
AAAGGCCGCCAGCCCGATTGTTGTTCCCTTTGTACTATCCAGTTTTATTGCGGTGATTTGTAATCCGGCGATTGGTTTGA
TGACCAAATACCGCGTACCTAAATGGCTCGCCGTGATCCTGTTGATGGGGTTTATCGTGTTGATGGGCTTGTGGCTCGCC
TCCCTTGTTGGCAGCTCCATTAACGAGTTTTCTAAGCAGTTGCCGCAGTATCGAGACCAGCTGGTGGAGCAGTTTTCTTG
GGTGCTGCATAAGTTGCAGGCGCTGAATATCCAAATCTCTAAGGAGCAAGTGCTGGCCTATTTTGACCCCGGTATGGCGT
TGTCTATGACCACCAATATGCTCTCGGGTGTCGGCAATGTGATGGCGAATTTGTTCCTGATCATTCTGACCATCGTCTTT
ATGTTGTTTGAGGCGCAATCTTTGCCGAAAAAACTGCACTTGGCACTGGACGATCCCGATATGCGTTTGCAGCAGATTGA
CCGTTTTCTGCAATCGGTGAATCAATATATGGTGATCAAGACCTTAGTCAGTTTAGCGACGGGCTTGATTGTCGGCGTGG
GGCTTGCGGTGATTGGGGTGGATTACGCGCTGCTTTGGGCTGTGATCGCCTTTTTATTCAACTATATTCCCAACATTGGC
TCGATTATCGCGGCCATTCCCGCCGTATTACTGGCCTTTATCCAATTAGGCCCCGCAGCGGCTGGCGGTACTGCGCTGCT
GTACGTTGCTGCCAATATGGTGATGGGCAACCTGGTCGAGCCTAAATTTATGGGCCGCGGTCTTGGGCTTTCTACCTTAG
TGGTGTTTTTATCATTAATTTTTTGGGGCTGGTTGCTGGGCTCGGTGGGCATGTTGCTGTCGGTTCCCTTAACCATGGTC
GTCAAGATCGCCCTCGAATCCAGCAAGAGTGGTAGCTGGTTAGCCATTTTATTATCCGACGATGTGGATGATAAACTGGT
GAGCCAATCGACAAGCACCGCTCCGATTTCTGAACCTGTCGATACCCATTCAACAGATAATAAGTAG

Upstream 100 bases:

>100_bases
CATAATGACAATCTAGTTTTATGGCTTAGGTGATTGAGTTTGAGACTTTTCTTGGGCTAGCCTAACAACTTTATCTAAGA
TCAAGAAGGATTTTTACGCC

Downstream 100 bases:

>100_bases
TAGATAATGCAACGTTTTATAGATGCACTGGCGACGATAGAAGTCGGTGAAGATGCCACGCGATTATTCCATGGCCGCGG
TGGTTATTACCCTGGCTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MTRSNTPSAAYKGFAVMAFVVIILAGIKAASPIVVPFVLSSFIAVICNPAIGLMTKYRVPKWLAVILLMGFIVLMGLWLA
SLVGSSINEFSKQLPQYRDQLVEQFSWVLHKLQALNIQISKEQVLAYFDPGMALSMTTNMLSGVGNVMANLFLIILTIVF
MLFEAQSLPKKLHLALDDPDMRLQQIDRFLQSVNQYMVIKTLVSLATGLIVGVGLAVIGVDYALLWAVIAFLFNYIPNIG
SIIAAIPAVLLAFIQLGPAAAGGTALLYVAANMVMGNLVEPKFMGRGLGLSTLVVFLSLIFWGWLLGSVGMLLSVPLTMV
VKIALESSKSGSWLAILLSDDVDDKLVSQSTSTAPISEPVDTHSTDNK

Sequences:

>Translated_368_residues
MTRSNTPSAAYKGFAVMAFVVIILAGIKAASPIVVPFVLSSFIAVICNPAIGLMTKYRVPKWLAVILLMGFIVLMGLWLA
SLVGSSINEFSKQLPQYRDQLVEQFSWVLHKLQALNIQISKEQVLAYFDPGMALSMTTNMLSGVGNVMANLFLIILTIVF
MLFEAQSLPKKLHLALDDPDMRLQQIDRFLQSVNQYMVIKTLVSLATGLIVGVGLAVIGVDYALLWAVIAFLFNYIPNIG
SIIAAIPAVLLAFIQLGPAAAGGTALLYVAANMVMGNLVEPKFMGRGLGLSTLVVFLSLIFWGWLLGSVGMLLSVPLTMV
VKIALESSKSGSWLAILLSDDVDDKLVSQSTSTAPISEPVDTHSTDNK
>Mature_367_residues
TRSNTPSAAYKGFAVMAFVVIILAGIKAASPIVVPFVLSSFIAVICNPAIGLMTKYRVPKWLAVILLMGFIVLMGLWLAS
LVGSSINEFSKQLPQYRDQLVEQFSWVLHKLQALNIQISKEQVLAYFDPGMALSMTTNMLSGVGNVMANLFLIILTIVFM
LFEAQSLPKKLHLALDDPDMRLQQIDRFLQSVNQYMVIKTLVSLATGLIVGVGLAVIGVDYALLWAVIAFLFNYIPNIGS
IIAAIPAVLLAFIQLGPAAAGGTALLYVAANMVMGNLVEPKFMGRGLGLSTLVVFLSLIFWGWLLGSVGMLLSVPLTMVV
KIALESSKSGSWLAILLSDDVDDKLVSQSTSTAPISEPVDTHSTDNK

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787885, Length=324, Percent_Identity=46.9135802469136, Blast_Score=261, Evalue=4e-71,
Organism=Escherichia coli, GI87082271, Length=340, Percent_Identity=41.4705882352941, Blast_Score=258, Evalue=4e-70,
Organism=Escherichia coli, GI1788838, Length=279, Percent_Identity=24.0143369175627, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 39741; Mature: 39610

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCC
>Mature Secondary Structure 
TRSNTPSAAYKGFAVMAFVVIILAGIKAASPIVVPFVLSSFIAVICNPAIGLMTKYRVP
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHCCH
KWLAVILLMGFIVLMGLWLASLVGSSINEFSKQLPQYRDQLVEQFSWVLHKLQALNIQIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
KEQVLAYFDPGMALSMTTNMLSGVGNVMANLFLIILTIVFMLFEAQSLPKKLHLALDDPD
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEECCCC
MRLQQIDRFLQSVNQYMVIKTLVSLATGLIVGVGLAVIGVDYALLWAVIAFLFNYIPNIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
SIIAAIPAVLLAFIQLGPAAAGGTALLYVAANMVMGNLVEPKFMGRGLGLSTLVVFLSLI
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHH
FWGWLLGSVGMLLSVPLTMVVKIALESSKSGSWLAILLSDDVDDKLVSQSTSTAPISEPV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHCCCCCCCCCCCC
DTHSTDNK
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]