Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117919833

Identifier: 117919833

GI number: 117919833

Start: 1600280

End: 1600924

Strand: Direct

Name: 117919833

Synonym: Shewana3_1385

Alternate gene names: NA

Gene position: 1600280-1600924 (Clockwise)

Preceding gene: 117919832

Following gene: 117919834

Centisome position: 32.18

GC content: 30.54

Gene sequence:

>645_bases
ATGTCAATTATTGTGGAGTCTTTAGGTGTTTGGCTTCGATATGTAGGCTCGCTATACGATGAACCAGCTTTAGGTTACTC
TTCGCATGTAAGGCTCGCAACTCTCGGTCGATTTTTCATTTTAATCTCTGCGCCTTTACTTGGTTTACTAATAGATAATG
GTATTGACTCAAAAAGCATAGCATATATAGGTTTTTTGACTTTTTTGCTTGTTTTTGTATTTTTACTGATAAGTTTTAAC
GTGAGAGTTACCGAATTTATCTTTAAAATATATCATCTTTTGAATAGAGAAACTTTGTCATCAGGTGTAAAAAATGACTT
TGCTAAATCATTTTTTAAAATTACGGTTAATAAAAAGTTAGTTTTGTGCTCGAGTTTTTCATTTTTAATGACAGCTAGTG
GTATTTTAATTGTAAATTATTTAGCTACTATTTTTATTGATAATAGAGCGATGATTGTCCAGATGTCGGCTTTTATTACT
ATGTTTGGCACTTTGATTCATGCTTTCTTGGTAGATCCAGTTTTAGCAAGGAATTGTGATGAAAATATTGGGAATGCATT
ATCTGCTATAGTAAGTTTTATTTATGGGAGATTATTTTCATCTATTTTATTAACATTGTTTTTTGGCTTTTTGGGATTGT
TATGA

Upstream 100 bases:

>100_bases
TAATTAGTTCAAAAAGGCAGTTCTTGAATATATGGCGCCCTTCGTTCATTAATTGGTTATCAAGATGGTAATATCATTTG
TTGTCGCTATTTTTATAGCC

Downstream 100 bases:

>100_bases
ATGAAAGAGTAATCTATTTACGTTTGGTTGGTGGGCTTGGTAATCAATTGTATCAATTTGCTTTCGCTTATTATCTTAGA
GAAAGATTCGATTTTGATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MSIIVESLGVWLRYVGSLYDEPALGYSSHVRLATLGRFFILISAPLLGLLIDNGIDSKSIAYIGFLTFLLVFVFLLISFN
VRVTEFIFKIYHLLNRETLSSGVKNDFAKSFFKITVNKKLVLCSSFSFLMTASGILIVNYLATIFIDNRAMIVQMSAFIT
MFGTLIHAFLVDPVLARNCDENIGNALSAIVSFIYGRLFSSILLTLFFGFLGLL

Sequences:

>Translated_214_residues
MSIIVESLGVWLRYVGSLYDEPALGYSSHVRLATLGRFFILISAPLLGLLIDNGIDSKSIAYIGFLTFLLVFVFLLISFN
VRVTEFIFKIYHLLNRETLSSGVKNDFAKSFFKITVNKKLVLCSSFSFLMTASGILIVNYLATIFIDNRAMIVQMSAFIT
MFGTLIHAFLVDPVLARNCDENIGNALSAIVSFIYGRLFSSILLTLFFGFLGLL
>Mature_213_residues
SIIVESLGVWLRYVGSLYDEPALGYSSHVRLATLGRFFILISAPLLGLLIDNGIDSKSIAYIGFLTFLLVFVFLLISFNV
RVTEFIFKIYHLLNRETLSSGVKNDFAKSFFKITVNKKLVLCSSFSFLMTASGILIVNYLATIFIDNRAMIVQMSAFITM
FGTLIHAFLVDPVLARNCDENIGNALSAIVSFIYGRLFSSILLTLFFGFLGLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23876; Mature: 23745

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIIVESLGVWLRYVGSLYDEPALGYSSHVRLATLGRFFILISAPLLGLLIDNGIDSKSI
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
AYIGFLTFLLVFVFLLISFNVRVTEFIFKIYHLLNRETLSSGVKNDFAKSFFKITVNKKL
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
VLCSSFSFLMTASGILIVNYLATIFIDNRAMIVQMSAFITMFGTLIHAFLVDPVLARNCD
EECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ENIGNALSAIVSFIYGRLFSSILLTLFFGFLGLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SIIVESLGVWLRYVGSLYDEPALGYSSHVRLATLGRFFILISAPLLGLLIDNGIDSKSI
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
AYIGFLTFLLVFVFLLISFNVRVTEFIFKIYHLLNRETLSSGVKNDFAKSFFKITVNKKL
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
VLCSSFSFLMTASGILIVNYLATIFIDNRAMIVQMSAFITMFGTLIHAFLVDPVLARNCD
EECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
ENIGNALSAIVSFIYGRLFSSILLTLFFGFLGLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA