Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117919816
Identifier: 117919816
GI number: 117919816
Start: 1580599
End: 1580997
Strand: Direct
Name: 117919816
Synonym: Shewana3_1368
Alternate gene names: NA
Gene position: 1580599-1580997 (Clockwise)
Preceding gene: 117919815
Following gene: 117919819
Centisome position: 31.79
GC content: 48.12
Gene sequence:
>399_bases ATGGGCGATGAATTTTTAATCGCAGCCTTAGTTTATGTGATTGCGTGTTTAGGGTTAGTCCTTTATCTCCAAAAACAATT GAGTAAGTTGCGCAGTAAAGTTGAAGCGTTAACCGTGCTGGTCAAAGAAGGCGATCGCCAACGTGAGTCCTTTAAACGGG AGTTGCAGGAGCTTCGCAGTGGCACTATCGGCATGGGGCGACGTGTTATCGAGCTTGAGAAGCGCTTACATCAACAATCC GAGCGTATCGAAGAGTCGACGCAGCAGGATCCTCAAGCCAAACTCTATACCCGAGCGATGAAAATGGTCGCGTTAGGCGC GGGGGTGGACGAACTGATTAAAGAGTGTGAGTTACCTAAAGCTGAGGCTGAGCTGTTAATTCGCCTTCATCGAAAATAG
Upstream 100 bases:
>100_bases ACAAACGGTTCATTTTGCCATTGTTTAATCATTTTGATTGCCGTTTGGTGAGCCTATTGTATTGTTGATTTCAGTTTATT GTGATGCGTAAGGATGATTA
Downstream 100 bases:
>100_bases GCAGACAAAGTCGCATCGTCCTTATTTTTAAGCTTTCTCTACAATTTTCTTGTGCATGTTATTCCACTGCTCAGGAAATT TGCCATCCAGCATGTACACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MGDEFLIAALVYVIACLGLVLYLQKQLSKLRSKVEALTVLVKEGDRQRESFKRELQELRSGTIGMGRRVIELEKRLHQQS ERIEESTQQDPQAKLYTRAMKMVALGAGVDELIKECELPKAEAELLIRLHRK
Sequences:
>Translated_132_residues MGDEFLIAALVYVIACLGLVLYLQKQLSKLRSKVEALTVLVKEGDRQRESFKRELQELRSGTIGMGRRVIELEKRLHQQS ERIEESTQQDPQAKLYTRAMKMVALGAGVDELIKECELPKAEAELLIRLHRK >Mature_131_residues GDEFLIAALVYVIACLGLVLYLQKQLSKLRSKVEALTVLVKEGDRQRESFKRELQELRSGTIGMGRRVIELEKRLHQQSE RIEESTQQDPQAKLYTRAMKMVALGAGVDELIKECELPKAEAELLIRLHRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15120; Mature: 14989
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDEFLIAALVYVIACLGLVLYLQKQLSKLRSKVEALTVLVKEGDRQRESFKRELQELRS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC GTIGMGRRVIELEKRLHQQSERIEESTQQDPQAKLYTRAMKMVALGAGVDELIKECELPK CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCH AEAELLIRLHRK HHHHHHHHHHCC >Mature Secondary Structure GDEFLIAALVYVIACLGLVLYLQKQLSKLRSKVEALTVLVKEGDRQRESFKRELQELRS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC GTIGMGRRVIELEKRLHQQSERIEESTQQDPQAKLYTRAMKMVALGAGVDELIKECELPK CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCH AEAELLIRLHRK HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA