Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_008577 |
Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is 117919814
Identifier: 117919814
GI number: 117919814
Start: 1578935
End: 1579942
Strand: Direct
Name: 117919814
Synonym: Shewana3_1366
Alternate gene names: NA
Gene position: 1578935-1579942 (Clockwise)
Preceding gene: 117919813
Following gene: 117919815
Centisome position: 31.76
GC content: 46.03
Gene sequence:
>1008_bases ATGTCAAAATCGGTTGATGAAACTGTTTTTGATTTTTTTGAATTATTGCTGCATGAAGAAGACTGCAAAGCTGTGGATTC CCCGAGTGCGCCTCAACATGAGGTTGTGGCACCACTGGTTGGCAAAAAAAATGAAGCACAATTACTCGATGACGCCATTT TAGCCGAGCACAGTCAGGCTAAAGTGCACGCGAGTGTGACCATTGCTGCTGAAGTGCAGCCGCAGAAGGCAAAGTCTGTC AGTAATATGCCTCATCTTGATGAGCCAGCGCCGTTAGTTAATAAGCAGGCTTTGGAGAAACTCCTCGCGCCGGTATTAAA AACGGTGGTGATTGAGGATAAGCCTGCGGAAGTGTTGAGCGAAGTCGCGCCCGAGATGGATAAGGTGCCTGAGGAGATCC AAGAGAGTATCTCTTCGCTACCCGAATGCGACGCTAGCGTCACCATTGAGCAGCCATCCACTGTCGTAGATGACGAGATA ATCATTGAGACAACACCCGAGACTCAGGTGGGGTTTGCCCCTCCAAGTATCACAAAAGACCTGCAAGAAGTACTCGATGA TGAGTTTCAAGTACTATTCTTTAAAGTGGCAGGGTTAACCTTAGCTGTGCCTTTAGTGAGTCTGGGTGGGATCGTTAAGG TTGAGCGGATTAATCATATTATCGGTCGCCCTTCTTGGTTTTTAGGGGTGCAAACCCATAGGGAAGAGCAGTTAAATCTG GTTGATACCTGTGCATGGGTGATGCCAGAAAAATACACGGATAAACTGGCGCAATCGGTAAATTATCAATATCTTGTATT ATTAGAAGGCAGTAATTGGGGATTAGCTTGTGAGTCTCTCGTTAATGCAGTAAAAATTAATAAATCGCAAGTAAACTGGC GCAGCAAAGCCGGGAAACGTCCTTGGTTAGCTGGTGTAGTGAAAGAACAAATGTGTGGCATTTTGCACGTACAAGCCTTA GTTGAAATGCTTGATGCGGGTTTAGGCTGTCAGGACTCCATTGGTTGA
Upstream 100 bases:
>100_bases AGTTTGGCACATTTACCCGCTTCCCATTATGCAAGCGGCAGTCGTGGCGTAAAAGCTTACGAGCGATTATTAGATTTTCT TTTAGCTGGGGAGTTTGGCC
Downstream 100 bases:
>100_bases GGTAAACATGAAAGATACAAGAAATGTCGCGGCCGTGGCTGCAAGTAAAGATGATGCAGTATTGCAATGGGTTACCTTTA AGTTAGACAACGAAACTTAT
Product: CheW protein
Products: NA
Alternate protein names: CheW Domain-Containing Protein; CheW-Like Protein; CheW Domain Protein; CheW-Like Domain-Containing Protein; Chemotaxis Coupling Protein; Chemotaxis-Like Protein; Flagellar Hook-Basal Body Complex Protein FliE
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MSKSVDETVFDFFELLLHEEDCKAVDSPSAPQHEVVAPLVGKKNEAQLLDDAILAEHSQAKVHASVTIAAEVQPQKAKSV SNMPHLDEPAPLVNKQALEKLLAPVLKTVVIEDKPAEVLSEVAPEMDKVPEEIQESISSLPECDASVTIEQPSTVVDDEI IIETTPETQVGFAPPSITKDLQEVLDDEFQVLFFKVAGLTLAVPLVSLGGIVKVERINHIIGRPSWFLGVQTHREEQLNL VDTCAWVMPEKYTDKLAQSVNYQYLVLLEGSNWGLACESLVNAVKINKSQVNWRSKAGKRPWLAGVVKEQMCGILHVQAL VEMLDAGLGCQDSIG
Sequences:
>Translated_335_residues MSKSVDETVFDFFELLLHEEDCKAVDSPSAPQHEVVAPLVGKKNEAQLLDDAILAEHSQAKVHASVTIAAEVQPQKAKSV SNMPHLDEPAPLVNKQALEKLLAPVLKTVVIEDKPAEVLSEVAPEMDKVPEEIQESISSLPECDASVTIEQPSTVVDDEI IIETTPETQVGFAPPSITKDLQEVLDDEFQVLFFKVAGLTLAVPLVSLGGIVKVERINHIIGRPSWFLGVQTHREEQLNL VDTCAWVMPEKYTDKLAQSVNYQYLVLLEGSNWGLACESLVNAVKINKSQVNWRSKAGKRPWLAGVVKEQMCGILHVQAL VEMLDAGLGCQDSIG >Mature_334_residues SKSVDETVFDFFELLLHEEDCKAVDSPSAPQHEVVAPLVGKKNEAQLLDDAILAEHSQAKVHASVTIAAEVQPQKAKSVS NMPHLDEPAPLVNKQALEKLLAPVLKTVVIEDKPAEVLSEVAPEMDKVPEEIQESISSLPECDASVTIEQPSTVVDDEII IETTPETQVGFAPPSITKDLQEVLDDEFQVLFFKVAGLTLAVPLVSLGGIVKVERINHIIGRPSWFLGVQTHREEQLNLV DTCAWVMPEKYTDKLAQSVNYQYLVLLEGSNWGLACESLVNAVKINKSQVNWRSKAGKRPWLAGVVKEQMCGILHVQALV EMLDAGLGCQDSIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36682; Mature: 36551
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKSVDETVFDFFELLLHEEDCKAVDSPSAPQHEVVAPLVGKKNEAQLLDDAILAEHSQA CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCC KVHASVTIAAEVQPQKAKSVSNMPHLDEPAPLVNKQALEKLLAPVLKTVVIEDKPAEVLS EEEEEEEEEEECCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH EVAPEMDKVPEEIQESISSLPECDASVTIEQPSTVVDDEIIIETTPETQVGFAPPSITKD HHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCHHHHH LQEVLDDEFQVLFFKVAGLTLAVPLVSLGGIVKVERINHIIGRPSWFLGVQTHREEQLNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHCCCCEEEECHHCCHHHHHH VDTCAWVMPEKYTDKLAQSVNYQYLVLLEGSNWGLACESLVNAVKINKSQVNWRSKAGKR HHHHHHHCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCHHHCCHHHHCCCC PWLAGVVKEQMCGILHVQALVEMLDAGLGCQDSIG CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SKSVDETVFDFFELLLHEEDCKAVDSPSAPQHEVVAPLVGKKNEAQLLDDAILAEHSQA CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCC KVHASVTIAAEVQPQKAKSVSNMPHLDEPAPLVNKQALEKLLAPVLKTVVIEDKPAEVLS EEEEEEEEEEECCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHH EVAPEMDKVPEEIQESISSLPECDASVTIEQPSTVVDDEIIIETTPETQVGFAPPSITKD HHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCCCCHHHHH LQEVLDDEFQVLFFKVAGLTLAVPLVSLGGIVKVERINHIIGRPSWFLGVQTHREEQLNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHCCCCEEEECHHCCHHHHHH VDTCAWVMPEKYTDKLAQSVNYQYLVLLEGSNWGLACESLVNAVKINKSQVNWRSKAGKR HHHHHHHCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHCCHHHCCHHHHCCCC PWLAGVVKEQMCGILHVQALVEMLDAGLGCQDSIG CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA