Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is ushA [C]
Identifier: 117919673
GI number: 117919673
Start: 1426364
End: 1428115
Strand: Reverse
Name: ushA [C]
Synonym: Shewana3_1224
Alternate gene names: 117919673
Gene position: 1428115-1426364 (Counterclockwise)
Preceding gene: 117919674
Following gene: 117919671
Centisome position: 28.72
GC content: 50.97
Gene sequence:
>1752_bases ATGACACAGGGATACACACTCTCACTCGCGCACATCAACGATACCCATTCGAATTTTGAGCCCAGCCGCGTACAATTTTC CTTCAATCTCGGGCTTAAAGCCTTAGATATCACCAGTCACAGCGGTGGCTATGCGCGCCTGGGGTATCAGATTAGTCAGG CACGTGACCGAGCCGCACAAAGCCAAATGCCGTTTTTATTTTTGCATGGGGGTGACAGTTTCCAAGGCACGCTGTATTTC AGCCATTTTAAGGGTAAGGCCAACGCCCATTTGCTGAATTTACTCTCACCCGATGCCATGGTGATTGGTAATCACGATAT TGATGAAGGCAATGCGCGGCTCGCCGAATTTGCTAAGCAAATCGATTTTCCGCTGCTGGCAGGCAATATGGACTTAAGCC AAGAGGATATCCGCAAGCCGGGTAACCTGCGTACTGTGGCGAATATTCTGGCCTATGATGAAAAAAACCAACTTGCCAGC TACCTCGAAAAGCCCTTCTACGACAAAAAGCTCGCTATCATCGGCATTACTCTGGATCAGATGAAAAACATCGCCAGACC CGATCCCGACACTCACTTTGTCGATGCGATTGCGACCACGGCGCGCACAGTCGCGCATCTGCATGCCAAAGGCATCAAGC ACATTATCGTACTGAGTCACTTAGGTTTAGATCAGGACAAAAGGCTTGCAGAACAAGTCGATGGCATCAGCCTTATCGTC GGTGGCCATACCCATACATTGCAGGGCGATTTTAGTGCCTTGGGGTTAAGCAATATACCCTATGGTGAAACCATCCATGG CACTCCTATCGTTCATGCGGGGAAATACGCCGAAACCTTAGGCTTGGCCGAGATTGAATTTGATGCAGCGGGCCGCGCGA TAAGCCTAAAAGGTGGCAACTATTTTATGCTCGATAAGCAGTTTATGTTGAGTTCGAGTGAGCAAGTGGATGACACTGAC TATCGAGCCGTGCAGCAACGCTTTAATGAGCATCCCTATGTATTGTGGGATGATGCCGATGAAGACATTCACGGTGTGAT CCAAGATATCTATCGCCCCGCGATTGCCGAGATGGAAAACAAAGTCTTAGCCCTTGTGCCTAAGAATCTAGTGCATACCA GGCTGCCTTCTAAGGCATTACCCCATGGCAGCGAAATCGCCCCTTGGGTGAGCCGCAGTATGTTCCAAGAGGCCAAACTT GAAGATCCTCGCATCCACTTTGCCCTGCATAACGCGGGCGGAGTGAGACAATCTGTCGCCCAAGGCAGGCTCACCCTCGC CGATGTGTTGGGCCAATTGCTCCCCTTCGAATTGCCATTAGTCAAATACGAAATCCAAGGCCAGTATTTATACCAAGCGC TGGAATCGGCGATTAACGCCGCGACAAACAACAGTGTGCGCGGCACCGGTGCGGGCAGCTTCCCCTATACCTACGGATTG CGTTATTACTACGATGGTAGACGCCCATTAGGGGAGCGTTTGTTCAAGCTTGAAATGATGCAGCAGGATGGCTTATCGCT CTGGTATCCAGTGCAACCCAATGCACTCTATGTGGGGGTTTCTACCTCTTATACCGCTGCGGGGAAAGAAGGCTATCACC CACTGTTACAGGCGCGCTGGCAGGAATCGATTGAGACGCTCACCCTACCCCAGGCCTTTATTCGCTTCCTCAATCGAGCG CCCAACCCCAATTTAGCGGATTTGCTCTCGCCCCATGTGCATTACACCAGCCATGTAAAGCGCTCGGTGTAA
Upstream 100 bases:
>100_bases TAATGACATTATTTAGTCATTGTTAAAGTAAAGGGAGCTTGGCTCCCTTTCTTGTTTTTGGGGAGAAGGTTATAATCTCC CGCCGTAAAAGAGGTAGGTT
Downstream 100 bases:
>100_bases GCGCACTGCCGCGAAGCTCTGTCCTCTTAACTCTGTCCTCTTAATTAATCACAGTACTTAGCCAATGGGTTAAGTACTGT GATTAATTCAATCCACATCA
Product: metallophosphoesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 583; Mature: 582
Protein sequence:
>583_residues MTQGYTLSLAHINDTHSNFEPSRVQFSFNLGLKALDITSHSGGYARLGYQISQARDRAAQSQMPFLFLHGGDSFQGTLYF SHFKGKANAHLLNLLSPDAMVIGNHDIDEGNARLAEFAKQIDFPLLAGNMDLSQEDIRKPGNLRTVANILAYDEKNQLAS YLEKPFYDKKLAIIGITLDQMKNIARPDPDTHFVDAIATTARTVAHLHAKGIKHIIVLSHLGLDQDKRLAEQVDGISLIV GGHTHTLQGDFSALGLSNIPYGETIHGTPIVHAGKYAETLGLAEIEFDAAGRAISLKGGNYFMLDKQFMLSSSEQVDDTD YRAVQQRFNEHPYVLWDDADEDIHGVIQDIYRPAIAEMENKVLALVPKNLVHTRLPSKALPHGSEIAPWVSRSMFQEAKL EDPRIHFALHNAGGVRQSVAQGRLTLADVLGQLLPFELPLVKYEIQGQYLYQALESAINAATNNSVRGTGAGSFPYTYGL RYYYDGRRPLGERLFKLEMMQQDGLSLWYPVQPNALYVGVSTSYTAAGKEGYHPLLQARWQESIETLTLPQAFIRFLNRA PNPNLADLLSPHVHYTSHVKRSV
Sequences:
>Translated_583_residues MTQGYTLSLAHINDTHSNFEPSRVQFSFNLGLKALDITSHSGGYARLGYQISQARDRAAQSQMPFLFLHGGDSFQGTLYF SHFKGKANAHLLNLLSPDAMVIGNHDIDEGNARLAEFAKQIDFPLLAGNMDLSQEDIRKPGNLRTVANILAYDEKNQLAS YLEKPFYDKKLAIIGITLDQMKNIARPDPDTHFVDAIATTARTVAHLHAKGIKHIIVLSHLGLDQDKRLAEQVDGISLIV GGHTHTLQGDFSALGLSNIPYGETIHGTPIVHAGKYAETLGLAEIEFDAAGRAISLKGGNYFMLDKQFMLSSSEQVDDTD YRAVQQRFNEHPYVLWDDADEDIHGVIQDIYRPAIAEMENKVLALVPKNLVHTRLPSKALPHGSEIAPWVSRSMFQEAKL EDPRIHFALHNAGGVRQSVAQGRLTLADVLGQLLPFELPLVKYEIQGQYLYQALESAINAATNNSVRGTGAGSFPYTYGL RYYYDGRRPLGERLFKLEMMQQDGLSLWYPVQPNALYVGVSTSYTAAGKEGYHPLLQARWQESIETLTLPQAFIRFLNRA PNPNLADLLSPHVHYTSHVKRSV >Mature_582_residues TQGYTLSLAHINDTHSNFEPSRVQFSFNLGLKALDITSHSGGYARLGYQISQARDRAAQSQMPFLFLHGGDSFQGTLYFS HFKGKANAHLLNLLSPDAMVIGNHDIDEGNARLAEFAKQIDFPLLAGNMDLSQEDIRKPGNLRTVANILAYDEKNQLASY LEKPFYDKKLAIIGITLDQMKNIARPDPDTHFVDAIATTARTVAHLHAKGIKHIIVLSHLGLDQDKRLAEQVDGISLIVG GHTHTLQGDFSALGLSNIPYGETIHGTPIVHAGKYAETLGLAEIEFDAAGRAISLKGGNYFMLDKQFMLSSSEQVDDTDY RAVQQRFNEHPYVLWDDADEDIHGVIQDIYRPAIAEMENKVLALVPKNLVHTRLPSKALPHGSEIAPWVSRSMFQEAKLE DPRIHFALHNAGGVRQSVAQGRLTLADVLGQLLPFELPLVKYEIQGQYLYQALESAINAATNNSVRGTGAGSFPYTYGLR YYYDGRRPLGERLFKLEMMQQDGLSLWYPVQPNALYVGVSTSYTAAGKEGYHPLLQARWQESIETLTLPQAFIRFLNRAP NPNLADLLSPHVHYTSHVKRSV
Specific function: Degradation Of External Udp-Glucose To Uridine Monophosphate And Glucose-1-Phosphate, Which Can Then Be Used By The Cell. [C]
COG id: COG0737
COG function: function code F; 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 5'-nucleotidase family [H]
Homologues:
Organism=Homo sapiens, GI4505467, Length=552, Percent_Identity=25.7246376811594, Blast_Score=131, Evalue=2e-30, Organism=Drosophila melanogaster, GI28573524, Length=573, Percent_Identity=28.4467713787086, Blast_Score=179, Evalue=6e-45, Organism=Drosophila melanogaster, GI19922444, Length=555, Percent_Identity=26.4864864864865, Blast_Score=151, Evalue=1e-36, Organism=Drosophila melanogaster, GI24641187, Length=550, Percent_Identity=26, Blast_Score=145, Evalue=7e-35, Organism=Drosophila melanogaster, GI19922446, Length=513, Percent_Identity=25.1461988304094, Blast_Score=135, Evalue=1e-31, Organism=Drosophila melanogaster, GI24654424, Length=513, Percent_Identity=25.1461988304094, Blast_Score=135, Evalue=1e-31, Organism=Drosophila melanogaster, GI221329836, Length=546, Percent_Identity=25.4578754578755, Blast_Score=123, Evalue=3e-28,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008334 - InterPro: IPR006146 - InterPro: IPR006179 - InterPro: IPR004843 - InterPro: IPR006420 [H]
Pfam domain/function: PF02872 5_nucleotid_C; PF00149 Metallophos [H]
EC number: =3.1.3.5 [H]
Molecular weight: Translated: 64842; Mature: 64711
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQGYTLSLAHINDTHSNFEPSRVQFSFNLGLKALDITSHSGGYARLGYQISQARDRAAQ CCCCEEEEEEEECCCCCCCCCCEEEEEEECCEEEEEEECCCCCEEEECEEHHHHHHHHHH SQMPFLFLHGGDSFQGTLYFSHFKGKANAHLLNLLSPDAMVIGNHDIDEGNARLAEFAKQ HCCCEEEEECCCCCCEEEEEEECCCCCCCEEEEECCCCEEEECCCCCCCCCHHHHHHHHH IDFPLLAGNMDLSQEDIRKPGNLRTVANILAYDEKNQLASYLEKPFYDKKLAIIGITLDQ CCCCEEECCCCCCHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEEEHHH MKNIARPDPDTHFVDAIATTARTVAHLHAKGIKHIIVLSHLGLDQDKRLAEQVDGISLIV HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCEEEEE GGHTHTLQGDFSALGLSNIPYGETIHGTPIVHAGKYAETLGLAEIEFDAAGRAISLKGGN CCCEEEECCCHHHCCCCCCCCCCCCCCCCCEECCCHHHHHCCEEEEECCCCCEEEECCCC YFMLDKQFMLSSSEQVDDTDYRAVQQRFNEHPYVLWDDADEDIHGVIQDIYRPAIAEMEN EEEEEHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCC KVLALVPKNLVHTRLPSKALPHGSEIAPWVSRSMFQEAKLEDPRIHFALHNAGGVRQSVA CEEEEECHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHH QGRLTLADVLGQLLPFELPLVKYEIQGQYLYQALESAINAATNNSVRGTGAGSFPYTYGL HCCCHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECE RYYYDGRRPLGERLFKLEMMQQDGLSLWYPVQPNALYVGVSTSYTAAGKEGYHPLLQARW EEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHH QESIETLTLPQAFIRFLNRAPNPNLADLLSPHVHYTSHVKRSV HHHHHHEEHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHCC >Mature Secondary Structure TQGYTLSLAHINDTHSNFEPSRVQFSFNLGLKALDITSHSGGYARLGYQISQARDRAAQ CCCEEEEEEEECCCCCCCCCCEEEEEEECCEEEEEEECCCCCEEEECEEHHHHHHHHHH SQMPFLFLHGGDSFQGTLYFSHFKGKANAHLLNLLSPDAMVIGNHDIDEGNARLAEFAKQ HCCCEEEEECCCCCCEEEEEEECCCCCCCEEEEECCCCEEEECCCCCCCCCHHHHHHHHH IDFPLLAGNMDLSQEDIRKPGNLRTVANILAYDEKNQLASYLEKPFYDKKLAIIGITLDQ CCCCEEECCCCCCHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEEEHHH MKNIARPDPDTHFVDAIATTARTVAHLHAKGIKHIIVLSHLGLDQDKRLAEQVDGISLIV HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCEEEEE GGHTHTLQGDFSALGLSNIPYGETIHGTPIVHAGKYAETLGLAEIEFDAAGRAISLKGGN CCCEEEECCCHHHCCCCCCCCCCCCCCCCCEECCCHHHHHCCEEEEECCCCCEEEECCCC YFMLDKQFMLSSSEQVDDTDYRAVQQRFNEHPYVLWDDADEDIHGVIQDIYRPAIAEMEN EEEEEHHHHHCCCCCCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCC KVLALVPKNLVHTRLPSKALPHGSEIAPWVSRSMFQEAKLEDPRIHFALHNAGGVRQSVA CEEEEECHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHH QGRLTLADVLGQLLPFELPLVKYEIQGQYLYQALESAINAATNNSVRGTGAGSFPYTYGL HCCCHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECE RYYYDGRRPLGERLFKLEMMQQDGLSLWYPVQPNALYVGVSTSYTAAGKEGYHPLLQARW EEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHH QESIETLTLPQAFIRFLNRAPNPNLADLLSPHVHYTSHVKRSV HHHHHHEEHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]