Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117919664
Identifier: 117919664
GI number: 117919664
Start: 1420034
End: 1420816
Strand: Reverse
Name: 117919664
Synonym: Shewana3_1215
Alternate gene names: NA
Gene position: 1420816-1420034 (Counterclockwise)
Preceding gene: 117919670
Following gene: 117919663
Centisome position: 28.58
GC content: 47.64
Gene sequence:
>783_bases ATGATAGTGTTAGTCGGCGGCGAAAAAGGCGGCAGCGGTAAGAGTTGCCTCGCACAAAATATCGCAGTATTTCTCACCAC TGAATGTGGTGCCTCTGTCATCATGGTGGATTGCGATCCACAACGCACCACATCCGATTGGATCCAAGCCAGAAACAACA ATCCAAAACTTGCTAGCATCAACTGTGTGCAACTTTATGGCAAAATCCGTAATGACTTGCTGAGTTTAGAGCAGCACTAT GACTTCGTTCTCGTAGATTGTGGTGGACAGGATAACCTCGCATTAAGGGCGACTATGTCAGTGGCATCCCATATTTTAAT GCCACTGCGACCAAAACGCCGCGACTTAAAAACCGTGAGTCATATGGATGATATCGTCGCAACTTGTAAGATGATTAACC CCAAGCTGCACGCCTCCTTCGTTATCACCCAATGCCCTAACCTGCCGAATCAAGCGAACCGTATTTTAGAGGCCAAAGAG GTCTGCAAAACCTACGATATCAATGTATTAGATGCGATTACCTATAGCCGTAATATCTATGATGACAGCGAAGAGTCAGG GTTATCTGTTATCGAGATAGAACCTAAGGGTAAAGCCGCCACCGAAATTCGTGCTATCGCCTGTGAAATGTTCCAAGTGG ACTGCGCCGCCTCATTAACGGCCTTACTCAGACCAAGCACACCAATGGCCGCGCATCGTGCCGCGATGAATCAACCTCAG CCGAATCATCTGAGAGGACAATATGGGACTCAGCGACCTCAAGAAAAACGCTATGCCATCTAG
Upstream 100 bases:
>100_bases TAACATAGGGTTTACATTCATTTATGACAACAAGGTGCGGTAAAAGCTCGACACTTATAACAGCCGCCCAAGTGATACCC TAAGCATTGAGGAATTCGTC
Downstream 100 bases:
>100_bases GGGAGGCGCACAGCCCCTCTCCCTCGATGAGTTTATTGACGCCGCGACCCTCTATGCCATGGGAGAAAACCGTCTCCCAA GTACCGGCGGCTCATTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Cobyrinic Acid A C-Diamide Synthase; Partition Protein; ParA Family Protein; Plasmid Partitioning Protein; ParA-Like Protein; Plasmid Partition Protein ParA; Partitioning Protein; Plasmid Partition Protein ParA-Like Protein; PARA Protein; Plasmid Stability Protein ParA; Plasmid Stability/Partitioning Protein; ATPases Involved In Chromosome Partitioning; CobQ/CobB/MinD/ParA Domain-Containing Protein; Plasmid Partitioning-Family Protein; ParA Partitioning Protein; Plasmid Segregation Oscillating ATPase ParF; ATPase ParA Type; Partitioning Protein ParA Family; Plasmid Stability Protein; ATPase Putative Partition Protein; Chromosome Partitioning ATPase ParA; Chromosome Partitioning; ATPase Involved In Chromosome Partitioning-Like Protein; ATPase; ParA Protein; Stability/Partitioning Determinant; MinD/ParA Family ATPase; Partition Protein A; ParA Partitioning-Like Protein; Partition Protein ATPase Activity; Partitioning Protein ParA-Family; ParA Plasmid Partitioning Protein
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MIVLVGGEKGGSGKSCLAQNIAVFLTTECGASVIMVDCDPQRTTSDWIQARNNNPKLASINCVQLYGKIRNDLLSLEQHY DFVLVDCGGQDNLALRATMSVASHILMPLRPKRRDLKTVSHMDDIVATCKMINPKLHASFVITQCPNLPNQANRILEAKE VCKTYDINVLDAITYSRNIYDDSEESGLSVIEIEPKGKAATEIRAIACEMFQVDCAASLTALLRPSTPMAAHRAAMNQPQ PNHLRGQYGTQRPQEKRYAI
Sequences:
>Translated_260_residues MIVLVGGEKGGSGKSCLAQNIAVFLTTECGASVIMVDCDPQRTTSDWIQARNNNPKLASINCVQLYGKIRNDLLSLEQHY DFVLVDCGGQDNLALRATMSVASHILMPLRPKRRDLKTVSHMDDIVATCKMINPKLHASFVITQCPNLPNQANRILEAKE VCKTYDINVLDAITYSRNIYDDSEESGLSVIEIEPKGKAATEIRAIACEMFQVDCAASLTALLRPSTPMAAHRAAMNQPQ PNHLRGQYGTQRPQEKRYAI >Mature_260_residues MIVLVGGEKGGSGKSCLAQNIAVFLTTECGASVIMVDCDPQRTTSDWIQARNNNPKLASINCVQLYGKIRNDLLSLEQHY DFVLVDCGGQDNLALRATMSVASHILMPLRPKRRDLKTVSHMDDIVATCKMINPKLHASFVITQCPNLPNQANRILEAKE VCKTYDINVLDAITYSRNIYDDSEESGLSVIEIEPKGKAATEIRAIACEMFQVDCAASLTALLRPSTPMAAHRAAMNQPQ PNHLRGQYGTQRPQEKRYAI
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28689; Mature: 28689
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVLVGGEKGGSGKSCLAQNIAVFLTTECGASVIMVDCDPQRTTSDWIQARNNNPKLASI CEEEEECCCCCCCHHHHHCCEEEEEEECCCCEEEEEECCCCCCCHHHHHHCCCCCCEEEE NCVQLYGKIRNDLLSLEQHYDFVLVDCGGQDNLALRATMSVASHILMPLRPKRRDLKTVS HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHH HMDDIVATCKMINPKLHASFVITQCPNLPNQANRILEAKEVCKTYDINVLDAITYSRNIY HHHHHHHHHHHCCCCHHEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC DDSEESGLSVIEIEPKGKAATEIRAIACEMFQVDCAASLTALLRPSTPMAAHRAAMNQPQ CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC PNHLRGQYGTQRPQEKRYAI CCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIVLVGGEKGGSGKSCLAQNIAVFLTTECGASVIMVDCDPQRTTSDWIQARNNNPKLASI CEEEEECCCCCCCHHHHHCCEEEEEEECCCCEEEEEECCCCCCCHHHHHHCCCCCCEEEE NCVQLYGKIRNDLLSLEQHYDFVLVDCGGQDNLALRATMSVASHILMPLRPKRRDLKTVS HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHH HMDDIVATCKMINPKLHASFVITQCPNLPNQANRILEAKEVCKTYDINVLDAITYSRNIY HHHHHHHHHHHCCCCHHEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC DDSEESGLSVIEIEPKGKAATEIRAIACEMFQVDCAASLTALLRPSTPMAAHRAAMNQPQ CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC PNHLRGQYGTQRPQEKRYAI CCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA