Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_008577 |
Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is 117919595
Identifier: 117919595
GI number: 117919595
Start: 1353330
End: 1353767
Strand: Reverse
Name: 117919595
Synonym: Shewana3_1146
Alternate gene names: NA
Gene position: 1353767-1353330 (Counterclockwise)
Preceding gene: 117919596
Following gene: 117919594
Centisome position: 27.23
GC content: 47.26
Gene sequence:
>438_bases ATGGGCTTTAACTTAACGGTGAATTGGCAAACCTCTCCAGCCGAAGAAGGCGAATTCTGCCGTGACCACAGCATTACGTT TGGCAGCGGTCAAACGATTCAGGCATCTTCCGCCCCCGAGTACAAGGGCAATGAACACTTGGTTAATCCAGAGGAAAGCC TGCTTGCAGCCTTATCCTCCTGTCATATGTTGACCTTCCTCGCCATTGCTCATCTTAAACGTCTCCCTGTCGCCTCCTAT GTCGACGAGGCTTCGGCAGAGTTGGGTAAAAACGAGACTGGTAAGCTTGCCGTCACAAAAATGATCTTAAATCCTAAGGT AGTGTTTGCCGAAGGTGTCGAGGTTTCTGCTGAGACTCTTGAGAAAATTCACGAAAAAGCACACGCAAACTGCTTTATCG CCAATACGTTAGCGACAGACATTCAAATTAAGTTTTAA
Upstream 100 bases:
>100_bases AGTCGTTTCAAAGGCGGCGCACTAAACTGTGCGCCCCATGCTGGAGAAGTCTTTTTAGCTAAGCTATAGTGCCCTGATGT CCTGCTATGAGGAGAAAAAC
Downstream 100 bases:
>100_bases CGATTTGGGGCAAGTTTATTGCGATGAACTTGCCCTCTCCGATGACCTATTTTCCCACCCGTTCAGCTTAGCTCAAGCTC GGTTACCGTATGATAACGCC
Product: OsmC family protein
Products: NA
Alternate protein names: OsmC-Like Protein; Redox Protein; OsmC/Ohr Family Protein; Osmc Family Protein; Redox Protein Regulator Of Disulfide Bond Formation; Peroxiredoxin OsmC; Regulator Of Disulfide Bond Formation; OsmC-Family Protein Like; Stress-Induced Protein OsmC-Like Protein; OsmC-Like Family; Osmotically Inducible Protein
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MGFNLTVNWQTSPAEEGEFCRDHSITFGSGQTIQASSAPEYKGNEHLVNPEESLLAALSSCHMLTFLAIAHLKRLPVASY VDEASAELGKNETGKLAVTKMILNPKVVFAEGVEVSAETLEKIHEKAHANCFIANTLATDIQIKF
Sequences:
>Translated_145_residues MGFNLTVNWQTSPAEEGEFCRDHSITFGSGQTIQASSAPEYKGNEHLVNPEESLLAALSSCHMLTFLAIAHLKRLPVASY VDEASAELGKNETGKLAVTKMILNPKVVFAEGVEVSAETLEKIHEKAHANCFIANTLATDIQIKF >Mature_144_residues GFNLTVNWQTSPAEEGEFCRDHSITFGSGQTIQASSAPEYKGNEHLVNPEESLLAALSSCHMLTFLAIAHLKRLPVASYV DEASAELGKNETGKLAVTKMILNPKVVFAEGVEVSAETLEKIHEKAHANCFIANTLATDIQIKF
Specific function: Unknown
COG id: COG1764
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15761; Mature: 15630
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFNLTVNWQTSPAEEGEFCRDHSITFGSGQTIQASSAPEYKGNEHLVNPEESLLAALSS CCCEEEEEECCCCCCCCCCCCCCCEEECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHH CHMLTFLAIAHLKRLPVASYVDEASAELGKNETGKLAVTKMILNPKVVFAEGVEVSAETL HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEECCCCCCHHHH EKIHEKAHANCFIANTLATDIQIKF HHHHHHHCCCEEEEEEECCEEEEEC >Mature Secondary Structure GFNLTVNWQTSPAEEGEFCRDHSITFGSGQTIQASSAPEYKGNEHLVNPEESLLAALSS CCEEEEEECCCCCCCCCCCCCCCEEECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHH CHMLTFLAIAHLKRLPVASYVDEASAELGKNETGKLAVTKMILNPKVVFAEGVEVSAETL HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEEEECCCCCCHHHH EKIHEKAHANCFIANTLATDIQIKF HHHHHHHCCCEEEEEEECCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA