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The map label for this gene is recN [H]

Identifier: 117919553

GI number: 117919553

Start: 1297313

End: 1298971

Strand: Reverse

Name: recN [H]

Synonym: Shewana3_1104

Alternate gene names: 117919553

Gene position: 1298971-1297313 (Counterclockwise)

Preceding gene: 117919554

Following gene: 117919552

Centisome position: 26.12

GC content: 49.25

Gene sequence:

>1659_bases
ATGCTTTGCCAACTCAGCATCAACAATTTCGCTATCGTACGTTTCCTTGAATTGGACTTTCGCCCCGGAATGACCAGCAT
TACTGGTGAGACTGGCGCGGGGAAATCCATCGCCATCGACGCCCTAGGTTTGTGCCTAGGCAACCGTGCCGATGCCAGCA
GTGTTCGTCCTGGCGCGAGCAAAACCGAAGTCAGTGCCCGATTTTCACTCGAGGATGTGCCTCTGGCAAAACGCTGGCTC
GAAGATAACGATCTCGAACTCGATGATGAGTGTATTCTGCGTCGAACCATTGGCAGTGACGGCCGCTCACGCGCCTATAT
CAATGGCAATCCCGTTCCTTTGACTCAGTTAAAATTACTGGGCCAATTGCTGGTGGGGATCCATGGCCAGCACGCCCACC
ATGCAATGTTAAAGAGTGAACATCAGCTCACCTTACTCGATAGCTACGCCAATCACAGGCTACTGATAGACACTGTCGCA
GCAAGCTATCAGCGCTGTAAACAAATCGAAGCAGAACTCAAGCAATTAGAAGCCTCACAGCAGGAACGTATCGCCCGTAA
ACAACTGGTGCAATATCAAGTTGAAGAGTTAGATGAGTTTGATCTCAAGGTGGGAGAGTTTGAAGAGATTGAACAGGAAC
ACAAACGCCTAGCAAACGGCACCGAGTTGGTTGATAGCTGCCAAGCCAGCCTGTTTTTGCTCACCGATGGTGAAGAGAGC
AATATCGAGTCACTGCTGAATAAAGCCGTTGGCCTTGCAGAGAATTTGCAAAGCTATGATCCCGCATTAACCAATGTCAG
CACTATGCTGAACGAGGCGCTTATTCAAGTACAAGAGAGCGCAGGCGAATTGCAGCACTACCTAAGTAAACTTGAACTCG
ACCCCGCGCATTTTGCCTATTTAGAGGAAAGACTCTCTAAAGCCATGCAACTGGCCCGTAAGCACCATGTTAGCCCAGAC
AAATTAGCCGAGCATCATCTCGCCCTCAAGTCAGAACTCACCACACTCGATGATGATGAAAATAAGCTAGAAGATATCCA
ACGCCAAGTGGAGGCCAGTAAAGTGGCCTACCTCGCTAACGCGCAAAAGCTGAGTCAGAGCCGCGCCCGTTACGCGAAAG
AGTTGGATAAGTTGGTGACTCAATCCATCCACGAACTCAATATGCCTAAGGGTAAGTTCACCATTGAAGTGAATTTCAAC
CCAGAAATCATATCGATGAATGGCAGCGATAATATTGAGTTTATGGTTACCACCAACCCAGGTCAGCCATTACAACCTAT
ATCTAGGGTTGCCTCAGGCGGCGAATTGTCACGTATAGGCCTTGGTATTCAAGTCATTACCGCGAAAAAGGTTGCCACTC
CGACACTTATTTTCGACGAGGTGGATGTTGGGATCTCGGGCCCCACCGCAGCCGTGGTTGGACGTATGCTACGTAGCCTT
GGCGAATCGACCCAAGTGCTGTGTGTGACCCATTTACCGCAAGTTGCCGGTAATGGCCATCAACATATGTTTGTGAATAA
ATTCAACAAGGCGGGAAGTACTGAAACTACTATGACGCCTTTAGATAGGGAACAACGCATCCAAGAGCTCGCCAGATTAC
TCGGTGGCGATACGATTACCACCAACACCTTAGCCAATGCACGGGAGTTATTGCAGTAG

Upstream 100 bases:

>100_bases
CATGTCGAATATTCACCCAAAGCCACTTTACTGTATATAAATTCAGTATATACTGTTTATCAATACAGTGATTTGGTAAG
TTTTTCGACAGGAACTCACT

Downstream 100 bases:

>100_bases
TCATTCGCTTAATCCTGTAAATGAAGGTGTACACATAATGAAGGTTCTGAGAGAGCCTTCATTTTTTATTGTGCAGAATA
ATTATCCAAGCTAAAGCATA

Product: recombination and repair protein

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 552; Mature: 552

Protein sequence:

>552_residues
MLCQLSINNFAIVRFLELDFRPGMTSITGETGAGKSIAIDALGLCLGNRADASSVRPGASKTEVSARFSLEDVPLAKRWL
EDNDLELDDECILRRTIGSDGRSRAYINGNPVPLTQLKLLGQLLVGIHGQHAHHAMLKSEHQLTLLDSYANHRLLIDTVA
ASYQRCKQIEAELKQLEASQQERIARKQLVQYQVEELDEFDLKVGEFEEIEQEHKRLANGTELVDSCQASLFLLTDGEES
NIESLLNKAVGLAENLQSYDPALTNVSTMLNEALIQVQESAGELQHYLSKLELDPAHFAYLEERLSKAMQLARKHHVSPD
KLAEHHLALKSELTTLDDDENKLEDIQRQVEASKVAYLANAQKLSQSRARYAKELDKLVTQSIHELNMPKGKFTIEVNFN
PEIISMNGSDNIEFMVTTNPGQPLQPISRVASGGELSRIGLGIQVITAKKVATPTLIFDEVDVGISGPTAAVVGRMLRSL
GESTQVLCVTHLPQVAGNGHQHMFVNKFNKAGSTETTMTPLDREQRIQELARLLGGDTITTNTLANARELLQ

Sequences:

>Translated_552_residues
MLCQLSINNFAIVRFLELDFRPGMTSITGETGAGKSIAIDALGLCLGNRADASSVRPGASKTEVSARFSLEDVPLAKRWL
EDNDLELDDECILRRTIGSDGRSRAYINGNPVPLTQLKLLGQLLVGIHGQHAHHAMLKSEHQLTLLDSYANHRLLIDTVA
ASYQRCKQIEAELKQLEASQQERIARKQLVQYQVEELDEFDLKVGEFEEIEQEHKRLANGTELVDSCQASLFLLTDGEES
NIESLLNKAVGLAENLQSYDPALTNVSTMLNEALIQVQESAGELQHYLSKLELDPAHFAYLEERLSKAMQLARKHHVSPD
KLAEHHLALKSELTTLDDDENKLEDIQRQVEASKVAYLANAQKLSQSRARYAKELDKLVTQSIHELNMPKGKFTIEVNFN
PEIISMNGSDNIEFMVTTNPGQPLQPISRVASGGELSRIGLGIQVITAKKVATPTLIFDEVDVGISGPTAAVVGRMLRSL
GESTQVLCVTHLPQVAGNGHQHMFVNKFNKAGSTETTMTPLDREQRIQELARLLGGDTITTNTLANARELLQ
>Mature_552_residues
MLCQLSINNFAIVRFLELDFRPGMTSITGETGAGKSIAIDALGLCLGNRADASSVRPGASKTEVSARFSLEDVPLAKRWL
EDNDLELDDECILRRTIGSDGRSRAYINGNPVPLTQLKLLGQLLVGIHGQHAHHAMLKSEHQLTLLDSYANHRLLIDTVA
ASYQRCKQIEAELKQLEASQQERIARKQLVQYQVEELDEFDLKVGEFEEIEQEHKRLANGTELVDSCQASLFLLTDGEES
NIESLLNKAVGLAENLQSYDPALTNVSTMLNEALIQVQESAGELQHYLSKLELDPAHFAYLEERLSKAMQLARKHHVSPD
KLAEHHLALKSELTTLDDDENKLEDIQRQVEASKVAYLANAQKLSQSRARYAKELDKLVTQSIHELNMPKGKFTIEVNFN
PEIISMNGSDNIEFMVTTNPGQPLQPISRVASGGELSRIGLGIQVITAKKVATPTLIFDEVDVGISGPTAAVVGRMLRSL
GESTQVLCVTHLPQVAGNGHQHMFVNKFNKAGSTETTMTPLDREQRIQELARLLGGDTITTNTLANARELLQ

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=551, Percent_Identity=56.9872958257713, Blast_Score=623, Evalue=1e-179,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 61022; Mature: 61022

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCQLSINNFAIVRFLELDFRPGMTSITGETGAGKSIAIDALGLCLGNRADASSVRPGAS
CEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCC
KTEVSARFSLEDVPLAKRWLEDNDLELDDECILRRTIGSDGRSRAYINGNPVPLTQLKLL
CCCCEEEECCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHH
GQLLVGIHGQHAHHAMLKSEHQLTLLDSYANHRLLIDTVAASYQRCKQIEAELKQLEASQ
HHHHHHCCCCHHHHHHHHCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
QERIARKQLVQYQVEELDEFDLKVGEFEEIEQEHKRLANGTELVDSCQASLFLLTDGEES
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHCCEEEEEECCCCH
NIESLLNKAVGLAENLQSYDPALTNVSTMLNEALIQVQESAGELQHYLSKLELDPAHFAY
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LEERLSKAMQLARKHHVSPDKLAEHHLALKSELTTLDDDENKLEDIQRQVEASKVAYLAN
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AQKLSQSRARYAKELDKLVTQSIHELNMPKGKFTIEVNFNPEIISMNGSDNIEFMVTTNP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCCCCEEEEEECCC
GQPLQPISRVASGGELSRIGLGIQVITAKKVATPTLIFDEVDVGISGPTAAVVGRMLRSL
CCCHHHHHHHHCCCCEEECCCCEEEEEEHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHH
GESTQVLCVTHLPQVAGNGHQHMFVNKFNKAGSTETTMTPLDREQRIQELARLLGGDTIT
CCCCEEEEEECCHHHHCCCCCEEHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEE
TNTLANARELLQ
HHHHHHHHHHHC
>Mature Secondary Structure
MLCQLSINNFAIVRFLELDFRPGMTSITGETGAGKSIAIDALGLCLGNRADASSVRPGAS
CEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCCCC
KTEVSARFSLEDVPLAKRWLEDNDLELDDECILRRTIGSDGRSRAYINGNPVPLTQLKLL
CCCCEEEECCCCCCHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHH
GQLLVGIHGQHAHHAMLKSEHQLTLLDSYANHRLLIDTVAASYQRCKQIEAELKQLEASQ
HHHHHHCCCCHHHHHHHHCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHH
QERIARKQLVQYQVEELDEFDLKVGEFEEIEQEHKRLANGTELVDSCQASLFLLTDGEES
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHCCEEEEEECCCCH
NIESLLNKAVGLAENLQSYDPALTNVSTMLNEALIQVQESAGELQHYLSKLELDPAHFAY
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LEERLSKAMQLARKHHVSPDKLAEHHLALKSELTTLDDDENKLEDIQRQVEASKVAYLAN
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AQKLSQSRARYAKELDKLVTQSIHELNMPKGKFTIEVNFNPEIISMNGSDNIEFMVTTNP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCCCCEEEEEECCC
GQPLQPISRVASGGELSRIGLGIQVITAKKVATPTLIFDEVDVGISGPTAAVVGRMLRSL
CCCHHHHHHHHCCCCEEECCCCEEEEEEHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHH
GESTQVLCVTHLPQVAGNGHQHMFVNKFNKAGSTETTMTPLDREQRIQELARLLGGDTIT
CCCCEEEEEECCHHHHCCCCCEEHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEE
TNTLANARELLQ
HHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA