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The map label for this gene is yfhL [H]

Identifier: 117919516

GI number: 117919516

Start: 1252573

End: 1252824

Strand: Reverse

Name: yfhL [H]

Synonym: Shewana3_1067

Alternate gene names: 117919516

Gene position: 1252824-1252573 (Counterclockwise)

Preceding gene: 117919517

Following gene: 117919514

Centisome position: 25.2

GC content: 50.4

Gene sequence:

>252_bases
ATGGCATTACTGATCGACGACAGCTGCATCAATTGCGACATGTGTGAACCTGAATGTCCGAATCAGGCCATCACCATGGG
GGAAGAAATCTACGAAATCGACCCAGAGCGCTGCACCGAATGCGTAGGCCATTACGATAAGCCGACCTGCGTCTCCGTCT
GTCCGATTGATTGTATTGACCCCGATCCTAACCGCGTCGAGTCCCGCGACGAGCTATTGGTCAAATTTGCCATACTCACG
CAAAAAATTTAA

Upstream 100 bases:

>100_bases
CTTGCCCGTCCCGAAAGAGGTTGATCTGCACCACGGCATTTTACTGCGTAACCTGCCCCAAGGTCAGGATACCCGCAACC
CACACGAAGCAGGCTAAGGC

Downstream 100 bases:

>100_bases
GTGAGCATCGACCGTTTAAGCTAAACAAAAAGCCCCGCTATGTCAGCGGGGCTTTTGTTTATCGGTTGATTACAGCCAAG
TTCGCATCAGCTTAAGCTTG

Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 82

Protein sequence:

>83_residues
MALLIDDSCINCDMCEPECPNQAITMGEEIYEIDPERCTECVGHYDKPTCVSVCPIDCIDPDPNRVESRDELLVKFAILT
QKI

Sequences:

>Translated_83_residues
MALLIDDSCINCDMCEPECPNQAITMGEEIYEIDPERCTECVGHYDKPTCVSVCPIDCIDPDPNRVESRDELLVKFAILT
QKI
>Mature_82_residues
ALLIDDSCINCDMCEPECPNQAITMGEEIYEIDPERCTECVGHYDKPTCVSVCPIDCIDPDPNRVESRDELLVKFAILTQ
KI

Specific function: Unknown

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788914, Length=82, Percent_Identity=59.7560975609756, Blast_Score=104, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9353; Mature: 9222

Theoretical pI: Translated: 3.84; Mature: 3.84

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
14.5 %Cys+Met (Translated Protein)
11.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
13.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLIDDSCINCDMCEPECPNQAITMGEEIYEIDPERCTECVGHYDKPTCVSVCPIDCID
CEEEECCCCCCCCCCCCCCCCCCCCCCCHHEECCHHHHHHHHCCCCCCCEEEECCCCCCC
PDPNRVESRDELLVKFAILTQKI
CCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ALLIDDSCINCDMCEPECPNQAITMGEEIYEIDPERCTECVGHYDKPTCVSVCPIDCID
EEEECCCCCCCCCCCCCCCCCCCCCCCHHEECCHHHHHHHHCCCCCCCEEEECCCCCCC
PDPNRVESRDELLVKFAILTQKI
CCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]