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The map label for this gene is 117919463

Identifier: 117919463

GI number: 117919463

Start: 1186375

End: 1186908

Strand: Direct

Name: 117919463

Synonym: Shewana3_1014

Alternate gene names: NA

Gene position: 1186375-1186908 (Clockwise)

Preceding gene: 117919461

Following gene: 117919464

Centisome position: 23.86

GC content: 47.94

Gene sequence:

>534_bases
ATGGCACTGCTGCTGTTAATGCTGTTTTTTGCCGTAACCGGGATCACCTTAAACCATCCCAATTGGTTTTCTTCAGCGGA
TCAAGAACCACGACGTGAACAGTTTGATATTCCTAATTATTTAACACCTGCAGCGCCGCAGGAGCCTGAGTGGCGTTTAG
CGGCGGGGCATTGGTTAAAAAGCCAGTGGGATATGGATATTGGCACTGCCGATATCGATGAGGATGAGATAAGCCTAGTG
AATAAAGGCCCAGGCACCTATCGCACCGTCACCTTAGATCTGCTTGACGGCAAAGCCTATGTTGAGACTTTAGATTATGG
CGTTATTGCGGTGCTGAACGACCTGCACAAGGGGCGCAATACCGGGATTGTCTGGGCTTGGGTGTTAGATCTCTGCGCCT
TGCTGATTATTCTCTTTTCGCTCACCGGCGCCTATTTGCTGCTGCCTCAAACGAAACGACTTAAAAAATCCTTGTTTTAT
ATGGTGCTCGTCAGTTCAGGCTGTGCACTTGTGTATGTCTATTTTGTTCCATAG

Upstream 100 bases:

>100_bases
AGGCGCTCGCCTAATATCCCTTCTTGAGAGTCAGTCATTGAAATTAAAAGTTAGTAAATCATCGCTTTCCTTCGCTCGGA
CTATTCATGTTTATGTCTCT

Downstream 100 bases:

>100_bases
GGAGAACCGATTAATGATGCGTCAGCTTATTCGCACCAGCGCCATAGGTGCGTTGTTTGTGAGTTCAGCGGTATTTGCCG
CGCCGAAAATGACCGTTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: PepSY-Associated TM Helix; PepSY-Associated TM Helix Domain Protein; Membrane-Associated Protein; PepSY-Associated TM Helix Family; Plasmolipin

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MALLLLMLFFAVTGITLNHPNWFSSADQEPRREQFDIPNYLTPAAPQEPEWRLAAGHWLKSQWDMDIGTADIDEDEISLV
NKGPGTYRTVTLDLLDGKAYVETLDYGVIAVLNDLHKGRNTGIVWAWVLDLCALLIILFSLTGAYLLLPQTKRLKKSLFY
MVLVSSGCALVYVYFVP

Sequences:

>Translated_177_residues
MALLLLMLFFAVTGITLNHPNWFSSADQEPRREQFDIPNYLTPAAPQEPEWRLAAGHWLKSQWDMDIGTADIDEDEISLV
NKGPGTYRTVTLDLLDGKAYVETLDYGVIAVLNDLHKGRNTGIVWAWVLDLCALLIILFSLTGAYLLLPQTKRLKKSLFY
MVLVSSGCALVYVYFVP
>Mature_176_residues
ALLLLMLFFAVTGITLNHPNWFSSADQEPRREQFDIPNYLTPAAPQEPEWRLAAGHWLKSQWDMDIGTADIDEDEISLVN
KGPGTYRTVTLDLLDGKAYVETLDYGVIAVLNDLHKGRNTGIVWAWVLDLCALLIILFSLTGAYLLLPQTKRLKKSLFYM
VLVSSGCALVYVYFVP

Specific function: Unknown

COG id: COG3295

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19952; Mature: 19821

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLLLMLFFAVTGITLNHPNWFSSADQEPRREQFDIPNYLTPAAPQEPEWRLAAGHWLK
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEECCCCHHC
SQWDMDIGTADIDEDEISLVNKGPGTYRTVTLDLLDGKAYVETLDYGVIAVLNDLHKGRN
CCCCCCCCCCCCCCHHHEEEECCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCC
TGIVWAWVLDLCALLIILFSLTGAYLLLPQTKRLKKSLFYMVLVSSGCALVYVYFVP
CCCHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHCCCEEEEEEECC
>Mature Secondary Structure 
ALLLLMLFFAVTGITLNHPNWFSSADQEPRREQFDIPNYLTPAAPQEPEWRLAAGHWLK
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEECCCCHHC
SQWDMDIGTADIDEDEISLVNKGPGTYRTVTLDLLDGKAYVETLDYGVIAVLNDLHKGRN
CCCCCCCCCCCCCCHHHEEEECCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCC
TGIVWAWVLDLCALLIILFSLTGAYLLLPQTKRLKKSLFYMVLVSSGCALVYVYFVP
CCCHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA