Click here to switch to the map view.

The map label for this gene is ybeB [H]

Identifier: 117919446

GI number: 117919446

Start: 1167714

End: 1168058

Strand: Reverse

Name: ybeB [H]

Synonym: Shewana3_0997

Alternate gene names: 117919446

Gene position: 1168058-1167714 (Counterclockwise)

Preceding gene: 117919447

Following gene: 117919445

Centisome position: 23.49

GC content: 48.12

Gene sequence:

>345_bases
ATGAGGTACATCAGCGTGCAGAGCGCCGAATTAAAGCAGTTTGTTGTCGACAAAATCGACGATTTAAAAGCCCGTGACGT
CGTGGTTATCGATGTCAGCAACCAATCTAACATCACCGACTATATGGTGATTTGTTCAGGTACATCTAAAACTCACGTGA
AAGCGATCGCCGAAAACCTCGTGCTCGAAGCGAAAGCCGCTGGCATTCCACCAATTGGTATCGAAGGCCGCGACAGCAGC
GAATGGGTATTGGTGGATATGGGCAACGTGATCCTGCATGTTATGCAAGACCAAACCCGCGATTTCTACCAGCTTGAAAA
GCTCTGGTCAGAAAAGCAAGCCTAA

Upstream 100 bases:

>100_bases
TGAAAATCAAGCGCTAAGAGTACAAACTCAGCCGCTAAGATCGCTAAGAGAATGTATTCCCCCGCTTAAGACTGATATAC
TAGCGCGCTATTTAAAATGA

Downstream 100 bases:

>100_bases
TGAAGTTGCAACTTATCGCAGTAGGGACACGGATGCCCGATTGGGTCACCCGCGGCTTTGAAGAGTACCAACGCCGCTTC
CCCCGAGATATGGCACTGGA

Product: iojap-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MRYISVQSAELKQFVVDKIDDLKARDVVVIDVSNQSNITDYMVICSGTSKTHVKAIAENLVLEAKAAGIPPIGIEGRDSS
EWVLVDMGNVILHVMQDQTRDFYQLEKLWSEKQA

Sequences:

>Translated_114_residues
MRYISVQSAELKQFVVDKIDDLKARDVVVIDVSNQSNITDYMVICSGTSKTHVKAIAENLVLEAKAAGIPPIGIEGRDSS
EWVLVDMGNVILHVMQDQTRDFYQLEKLWSEKQA
>Mature_114_residues
MRYISVQSAELKQFVVDKIDDLKARDVVVIDVSNQSNITDYMVICSGTSKTHVKAIAENLVLEAKAAGIPPIGIEGRDSS
EWVLVDMGNVILHVMQDQTRDFYQLEKLWSEKQA

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Homo sapiens, GI19923977, Length=90, Percent_Identity=43.3333333333333, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI87081768, Length=105, Percent_Identity=53.3333333333333, Blast_Score=134, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 12796; Mature: 12796

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYISVQSAELKQFVVDKIDDLKARDVVVIDVSNQSNITDYMVICSGTSKTHVKAIAENL
CCEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHH
VLEAKAAGIPPIGIEGRDSSEWVLVDMGNVILHVMQDQTRDFYQLEKLWSEKQA
HEEHHCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRYISVQSAELKQFVVDKIDDLKARDVVVIDVSNQSNITDYMVICSGTSKTHVKAIAENL
CCEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHH
VLEAKAAGIPPIGIEGRDSSEWVLVDMGNVILHVMQDQTRDFYQLEKLWSEKQA
HEEHHCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]