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The map label for this gene is nqrE [H]

Identifier: 117919391

GI number: 117919391

Start: 1103088

End: 1103696

Strand: Direct

Name: nqrE [H]

Synonym: Shewana3_0942

Alternate gene names: 117919391

Gene position: 1103088-1103696 (Clockwise)

Preceding gene: 117919390

Following gene: 117919392

Centisome position: 22.19

GC content: 45.81

Gene sequence:

>609_bases
ATGGAACATTATATTAGCCTGTTAATTCGCTCTGTTTTCATCGAAAACATGGCACTGGCCTTCTTCTTAGGTATGTGTAC
TTTCTTAGCGGTATCGAAGAAAGTGACTACCGCGATGGGCCTAGGGATTGCGGTAGTTGTAGTGTTAACTATCTCTGTTC
CTGCTAACCAAGTTATTTACCAAGGGCTGTTAGCACCTGGCGCACTGGCTTGGGCTGGTGCACCTGAAGCTGACCTAAGC
TTCTTGAAATTCATTACCTTTATCGGTGTGATTGCGGCTTTAGTTCAAATTCTGGAAATGGCACTGGATAAGTACTTTCC
TCCTTTGTACAACGCGTTAGGTATCTTCTTACCTCTGATCACTGTGAACTGTGCGATTTTCGGTGCGGTATCATTCATGG
TTGAGCGTGACTACAAGCTGGGCGAAAGTGTGGTGTTTGGTTTCGGCTCTGGAGTAGGTTGGGCATTAGCTATCGTATTG
ATGGCCGGTATCCGTGAGAAGCTGAAGTATGCCGATGTGCCGAATGGCCTGCGTGGTTTAGGTATTACCTTTATTACCGC
TGGTTTAATGGCCTTAGGTTTCATGTCGTTTTCTGGTGTGTCTCTGTAA

Upstream 100 bases:

>100_bases
GTTATTACTGCCGCCAAGTGCGTTCTTCCTGATCGGTATTCTGATTTGGATTATTCGTACCTATAAGCCAGAGCAAGTTG
AAGCAAAAGGGTAATTTGAG

Downstream 100 bases:

>100_bases
GAGACACCAAACGGCTTCTTGAATTGGACCTTCTAAGGATAAGTTAATGGATATTCTTGGTATTTTTAAATCTACTCCGC
TCGAGGTTTACCTCGGTGTG

Product: Na(+)-translocating NADH-quinone reductase subunit E

Products: NA

Alternate protein names: Na(+)-NQR subunit E; Na(+)-translocating NQR subunit E; NQR complex subunit E; NQR-1 subunit E [H]

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MEHYISLLIRSVFIENMALAFFLGMCTFLAVSKKVTTAMGLGIAVVVVLTISVPANQVIYQGLLAPGALAWAGAPEADLS
FLKFITFIGVIAALVQILEMALDKYFPPLYNALGIFLPLITVNCAIFGAVSFMVERDYKLGESVVFGFGSGVGWALAIVL
MAGIREKLKYADVPNGLRGLGITFITAGLMALGFMSFSGVSL

Sequences:

>Translated_202_residues
MEHYISLLIRSVFIENMALAFFLGMCTFLAVSKKVTTAMGLGIAVVVVLTISVPANQVIYQGLLAPGALAWAGAPEADLS
FLKFITFIGVIAALVQILEMALDKYFPPLYNALGIFLPLITVNCAIFGAVSFMVERDYKLGESVVFGFGSGVGWALAIVL
MAGIREKLKYADVPNGLRGLGITFITAGLMALGFMSFSGVSL
>Mature_202_residues
MEHYISLLIRSVFIENMALAFFLGMCTFLAVSKKVTTAMGLGIAVVVVLTISVPANQVIYQGLLAPGALAWAGAPEADLS
FLKFITFIGVIAALVQILEMALDKYFPPLYNALGIFLPLITVNCAIFGAVSFMVERDYKLGESVVFGFGSGVGWALAIVL
MAGIREKLKYADVPNGLRGLGITFITAGLMALGFMSFSGVSL

Specific function: NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to nqrE are probably involved in the second step, the conversion of ubisemiqui

COG id: COG2209

COG function: function code C; Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrE

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nqrDE/rnfAE family [H]

Homologues:

Organism=Escherichia coli, GI1787914, Length=200, Percent_Identity=43, Blast_Score=151, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003667
- InterPro:   IPR010967 [H]

Pfam domain/function: PF02508 Rnf-Nqr [H]

EC number: NA

Molecular weight: Translated: 21515; Mature: 21515

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHYISLLIRSVFIENMALAFFLGMCTFLAVSKKVTTAMGLGIAVVVVLTISVPANQVIY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
QGLLAPGALAWAGAPEADLSFLKFITFIGVIAALVQILEMALDKYFPPLYNALGIFLPLI
HHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
TVNCAIFGAVSFMVERDYKLGESVVFGFGSGVGWALAIVLMAGIREKLKYADVPNGLRGL
HHHHHHHHHHHHHHHHCHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
GITFITAGLMALGFMSFSGVSL
HHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEHYISLLIRSVFIENMALAFFLGMCTFLAVSKKVTTAMGLGIAVVVVLTISVPANQVIY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
QGLLAPGALAWAGAPEADLSFLKFITFIGVIAALVQILEMALDKYFPPLYNALGIFLPLI
HHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
TVNCAIFGAVSFMVERDYKLGESVVFGFGSGVGWALAIVLMAGIREKLKYADVPNGLRGL
HHHHHHHHHHHHHHHHCHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
GITFITAGLMALGFMSFSGVSL
HHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA