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The map label for this gene is nqrC [H]

Identifier: 117919389

GI number: 117919389

Start: 1101661

End: 1102449

Strand: Direct

Name: nqrC [H]

Synonym: Shewana3_0940

Alternate gene names: 117919389

Gene position: 1101661-1102449 (Clockwise)

Preceding gene: 117919388

Following gene: 117919390

Centisome position: 22.16

GC content: 45.25

Gene sequence:

>789_bases
GTGGCTAGTAATAAAGATTCGTTCGGCAGAACGTTATTTATCGTCGTTGGCTTATGCCTAATTTGTGCGATATTCGTGTC
GACTGCGGCAGTATTACTGCGCCCAACTCAAGCAGAAAACAAGCTGCTTGATAAGCAAAAGTACATCCTCGAAGCTGCGG
GTCTGATTGACACGAAAGCGGGCAAAGTAACCAAAGCTCAGATTTTGGATACTTACGGCAAGCACATTGAAGCTAAGTTA
GTTAACTTAAAAACCGGTGATTGGGTTGAAGGTGTTGATGCCAACACATTCGATCAACGCAAAGCGTCTCGCGATGTGAA
AACCTCTTTTGTACCTGAAAACGACATCGCTTCGGTTAAGCGTGTTGCTGAAGATGCAGTGGTTTATTTAGTGCGTGATG
AACAAGGTAAGTTAACCAGCGTGATCCTGCCAGTTCATGGTTATGGCCTGTGGTCGACTATGTATGCTTTCCTCGCGTTA
GATGCTGATCTGAACACGATTCAAAGCTTAGTGTACTACGAGCAAGGTGAAACCCCAGGTCTTGGTGGTGAAGTGCAAAA
CGCTCAGTGGAAAGCGAAATGGCACGGTAAAAAGTTATTTGATGAGCAAGGTAACATTGCTATCAGCGTAACTAAAAACC
CAGCTGTGGCTAGCACTGAATACGGTGTGGATGCATTATCCGGCGCGACTCTGACCAGTAACGGTGTTCAACACTCTCTG
ACATTCTGGTTAGGTAAAGAAGGTTTTGCGAGTTTCATTGAAAAAGCACGCAATGGAGGTCTCAGCTAA

Upstream 100 bases:

>100_bases
TTCCCAGAAGGCATGATGTTAGCGATTCTGTTTGCTAACTTGTTCGCGCCATTGTTCGACCACTTCGTGGTTCAGGCAAA
TATCAAGCGGAGGATTGCTC

Downstream 100 bases:

>100_bases
TGTCTGACGCTAAAGAGCTGAAACAGGTTCTGACTGGACCTATCGTCAACAACAACCCGATTGCATTACAAGTCCTTGGT
GTATGTAGTGCGTTAGCGGT

Product: Na(+)-translocating NADH-quinone reductase subunit C

Products: NA

Alternate protein names: Na(+)-NQR subunit C; Na(+)-translocating NQR subunit C; NQR complex subunit C; NQR-1 subunit C [H]

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MASNKDSFGRTLFIVVGLCLICAIFVSTAAVLLRPTQAENKLLDKQKYILEAAGLIDTKAGKVTKAQILDTYGKHIEAKL
VNLKTGDWVEGVDANTFDQRKASRDVKTSFVPENDIASVKRVAEDAVVYLVRDEQGKLTSVILPVHGYGLWSTMYAFLAL
DADLNTIQSLVYYEQGETPGLGGEVQNAQWKAKWHGKKLFDEQGNIAISVTKNPAVASTEYGVDALSGATLTSNGVQHSL
TFWLGKEGFASFIEKARNGGLS

Sequences:

>Translated_262_residues
MASNKDSFGRTLFIVVGLCLICAIFVSTAAVLLRPTQAENKLLDKQKYILEAAGLIDTKAGKVTKAQILDTYGKHIEAKL
VNLKTGDWVEGVDANTFDQRKASRDVKTSFVPENDIASVKRVAEDAVVYLVRDEQGKLTSVILPVHGYGLWSTMYAFLAL
DADLNTIQSLVYYEQGETPGLGGEVQNAQWKAKWHGKKLFDEQGNIAISVTKNPAVASTEYGVDALSGATLTSNGVQHSL
TFWLGKEGFASFIEKARNGGLS
>Mature_261_residues
ASNKDSFGRTLFIVVGLCLICAIFVSTAAVLLRPTQAENKLLDKQKYILEAAGLIDTKAGKVTKAQILDTYGKHIEAKLV
NLKTGDWVEGVDANTFDQRKASRDVKTSFVPENDIASVKRVAEDAVVYLVRDEQGKLTSVILPVHGYGLWSTMYAFLALD
ADLNTIQSLVYYEQGETPGLGGEVQNAQWKAKWHGKKLFDEQGNIAISVTKNPAVASTEYGVDALSGATLTSNGVQHSLT
FWLGKEGFASFIEKARNGGLS

Specific function: NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to nqrE are probably involved in the second step, the conversion of ubisemiqui

COG id: COG2869

COG function: function code C; Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC

Gene ontology:

Cell location: Cell inner membrane (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nqrC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007329
- InterPro:   IPR010204 [H]

Pfam domain/function: PF04205 FMN_bind [H]

EC number: NA

Molecular weight: Translated: 28464; Mature: 28332

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASNKDSFGRTLFIVVGLCLICAIFVSTAAVLLRPTQAENKLLDKQKYILEAAGLIDTKA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEECCC
GKVTKAQILDTYGKHIEAKLVNLKTGDWVEGVDANTFDQRKASRDVKTSFVPENDIASVK
CCCHHHHHHHHHHHCEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCHHCCCCCCHHHHHH
RVAEDAVVYLVRDEQGKLTSVILPVHGYGLWSTMYAFLALDADLNTIQSLVYYEQGETPG
HHHHCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
LGGEVQNAQWKAKWHGKKLFDEQGNIAISVTKNPAVASTEYGVDALSGATLTSNGVQHSL
CCCCCCCCEEEEEECCCHHHCCCCCEEEEEECCCCCCCCCCCCHHHCCCEEECCCCCEEH
TFWLGKEGFASFIEKARNGGLS
EEEECCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
ASNKDSFGRTLFIVVGLCLICAIFVSTAAVLLRPTQAENKLLDKQKYILEAAGLIDTKA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEECCC
GKVTKAQILDTYGKHIEAKLVNLKTGDWVEGVDANTFDQRKASRDVKTSFVPENDIASVK
CCCHHHHHHHHHHHCEEEEEEEECCCCCCCCCCCCCHHHHHHHCCCHHCCCCCCHHHHHH
RVAEDAVVYLVRDEQGKLTSVILPVHGYGLWSTMYAFLALDADLNTIQSLVYYEQGETPG
HHHHCEEEEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
LGGEVQNAQWKAKWHGKKLFDEQGNIAISVTKNPAVASTEYGVDALSGATLTSNGVQHSL
CCCCCCCCEEEEEECCCHHHCCCCCEEEEEECCCCCCCCCCCCHHHCCCEEECCCCCEEH
TFWLGKEGFASFIEKARNGGLS
EEEECCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10077658; 11248234 [H]