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The map label for this gene is ydiI [C]

Identifier: 117919357

GI number: 117919357

Start: 1058099

End: 1058536

Strand: Direct

Name: ydiI [C]

Synonym: Shewana3_0906

Alternate gene names: 117919357

Gene position: 1058099-1058536 (Clockwise)

Preceding gene: 117919356

Following gene: 117919358

Centisome position: 21.28

GC content: 50.68

Gene sequence:

>438_bases
ATGAGTATTTGGTTTAGACCTGTCACCTTAGAGGATTGTGCCCGTTTAGATGCTGGTATGGGGGGCAAAGGCACCTTGAT
GCAGACTCTCGGGATTGAGATCAGCGAGATTGGCGATGACTACATGAAGGCGACTATGCCTGCCACGCCCGCCGTACATA
ATCCCTTAGGCATAGTTCATGGCGGTGCTAACGTGGCGCTGGCCGAAACGGTTGCCAGCTATGCCGCAAACTTTGCGGTG
GATTTCGAGCAATATTATTGTGTTGGACAAGAGATTAACGCCAACCATTTACGCGCTTCGCGTAATGGCGTACTGACAGC
GACGGCTAAACCAGTTCATTTGGGGAAACGCAGTTCGGTGTGGGAAATCTTAATCCATAATAGTGCAGGGGAGTTGACCT
GTATTTCACGGATGACGGCGGCGGTAGTAAAACGCTAA

Upstream 100 bases:

>100_bases
ACTCCTTGCCGTCTTATACTGATTAAGCCAATGCGTATGTGTTGAACTTCAGTCACTTCTTAGTAAACTGCTAGCTGGTT
TTCTTTACTAGGATGTTGAA

Downstream 100 bases:

>100_bases
GAAGGCTCAACCAACCTGTTTTAGTTGTATCAATCGATAAATAAGGACGTGATATGGATAGTGCAATGATGTGGGAATGG
GTTGGTTATTTAGCGTCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MSIWFRPVTLEDCARLDAGMGGKGTLMQTLGIEISEIGDDYMKATMPATPAVHNPLGIVHGGANVALAETVASYAANFAV
DFEQYYCVGQEINANHLRASRNGVLTATAKPVHLGKRSSVWEILIHNSAGELTCISRMTAAVVKR

Sequences:

>Translated_145_residues
MSIWFRPVTLEDCARLDAGMGGKGTLMQTLGIEISEIGDDYMKATMPATPAVHNPLGIVHGGANVALAETVASYAANFAV
DFEQYYCVGQEINANHLRASRNGVLTATAKPVHLGKRSSVWEILIHNSAGELTCISRMTAAVVKR
>Mature_144_residues
SIWFRPVTLEDCARLDAGMGGKGTLMQTLGIEISEIGDDYMKATMPATPAVHNPLGIVHGGANVALAETVASYAANFAVD
FEQYYCVGQEINANHLRASRNGVLTATAKPVHLGKRSSVWEILIHNSAGELTCISRMTAAVVKR

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioesterase PaaI family [H]

Homologues:

Organism=Escherichia coli, GI1787976, Length=141, Percent_Identity=42.5531914893617, Blast_Score=119, Evalue=1e-28,
Organism=Escherichia coli, GI1786813, Length=141, Percent_Identity=36.8794326241135, Blast_Score=97, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003736
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 15531; Mature: 15400

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIWFRPVTLEDCARLDAGMGGKGTLMQTLGIEISEIGDDYMKATMPATPAVHNPLGIVH
CCEEECCCCHHHHHHHCCCCCCCCCCHHHHCCCHHHCCCHHHHHCCCCCCCCCCCCEEEE
GGANVALAETVASYAANFAVDFEQYYCVGQEINANHLRASRNGVLTATAKPVHLGKRSSV
CCCCCHHHHHHHHHHHHHEEEHHHEEEECCCCCCCCEECCCCCEEEECCCCEECCCCCCE
WEILIHNSAGELTCISRMTAAVVKR
EEEEEECCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SIWFRPVTLEDCARLDAGMGGKGTLMQTLGIEISEIGDDYMKATMPATPAVHNPLGIVH
CEEECCCCHHHHHHHCCCCCCCCCCHHHHCCCHHHCCCHHHHHCCCCCCCCCCCCEEEE
GGANVALAETVASYAANFAVDFEQYYCVGQEINANHLRASRNGVLTATAKPVHLGKRSSV
CCCCCHHHHHHHHHHHHHEEEHHHEEEECCCCCCCCEECCCCCEEEECCCCEECCCCCCE
WEILIHNSAGELTCISRMTAAVVKR
EEEEEECCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]