Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117919289
Identifier: 117919289
GI number: 117919289
Start: 969774
End: 970709
Strand: Reverse
Name: 117919289
Synonym: Shewana3_0837
Alternate gene names: NA
Gene position: 970709-969774 (Counterclockwise)
Preceding gene: 117919290
Following gene: 117919286
Centisome position: 19.52
GC content: 50.21
Gene sequence:
>936_bases ATGAGACAAACCATACTCGGAGCCAATGGCCAAATCGGCAGAGAACTAGCCCTTAGCCTTAACCGCGAGTTTGACTGTGA CATTCGCCTTGTTAGCCGTAAACCGCAAAAAGTGAATGCCACGGACGAGTTAAAGAGCGCCAACCTGCTCGACTTAGCAC AAACCTTAGCCGCGGTGGAAGGCTCTGACATCGTTTATCTCACGGCGGGACTGCCAATGGATACTCAGCTTTGGGTCGAG CAATGGCCTGTTATCATGGGTAATGTTATCCAGGCCTGTAAGACTCACGGCGCCAAGCTGGTGTATTTCGATAATACCTA TATGTATCCGCAAACGGCGCAGCCGCAGCACGAGGATGCAGCCTTTGTGCCCAATGGTGCCAAAGGCCGCGTGAGGGGCG ACATTACCCAAATATTACTCGATGAGATGAAGGCCGGGCGACTCGAGGCGATGATCTGCCGCGCGCCAGAATTTTACGGC CCTGGCCAAACCCAAAGTATTACCAACACCACGGCTATCGACAATCTCGCCCAAGGGAAAAAGGCCAAAGTGTTTTTACG TGACGATACGAAACGCAGTTTGATTTACACCCCAGATGCCAGCCGCGCCATGGCCTTACTCGGGAATACGCCTGATGCCT ATGGACAAACATGGCACTTACCTTGTGATGACAATAGATTGACCTATAAGGAATTTATTACTCTTGCCGCCGACATTTTT AAAGTATCGGCGCGATATACTGTGGTCAAAGAATGGCAACTGTGGCTCGCGGGTAAATTCAACCCCACCATACGTGATGC GGGAGAATTGCTGCCCCGTTATCGCTGCGACAATCTGTTTATTTCCGATAAATTTAAAGCTCGCTTCCCTGATTTTAAGG TCACTCGCTTTGAACAAGGGCTGGCTGAAATCGCCAAGGAACGCAAGTTAATCTAA
Upstream 100 bases:
>100_bases CGGTTAAGCTCAAGCGAATAAACTCAAAGATTGGCTATTGACCTTAAACTTAGCTTTAACCTTAGGATAGTGGCAAACGA GTCATCCCTTTGGAGAAAAC
Downstream 100 bases:
>100_bases GCGTATGCTCGATGGCATCGTGGATAAGTGTGACGCCATCTCATGCATTCACTAACTGGCAGTGAGTAAGAGTCAGACGC TTAGGTTATCAGTCGCTAAT
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family Protein; Sugar Dehydratase/Epimerase; Saccharopine Dehydrogenase Related Protein; NmrA-Like Protein/Nucleoside-Diphosphate-Sugar Epimerase; Nucleoside-Diphosphate-Sugar Epimerase; Saccharopine Dehydrogenase; NAD Dependent Epimerase/Dehydratase
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MRQTILGANGQIGRELALSLNREFDCDIRLVSRKPQKVNATDELKSANLLDLAQTLAAVEGSDIVYLTAGLPMDTQLWVE QWPVIMGNVIQACKTHGAKLVYFDNTYMYPQTAQPQHEDAAFVPNGAKGRVRGDITQILLDEMKAGRLEAMICRAPEFYG PGQTQSITNTTAIDNLAQGKKAKVFLRDDTKRSLIYTPDASRAMALLGNTPDAYGQTWHLPCDDNRLTYKEFITLAADIF KVSARYTVVKEWQLWLAGKFNPTIRDAGELLPRYRCDNLFISDKFKARFPDFKVTRFEQGLAEIAKERKLI
Sequences:
>Translated_311_residues MRQTILGANGQIGRELALSLNREFDCDIRLVSRKPQKVNATDELKSANLLDLAQTLAAVEGSDIVYLTAGLPMDTQLWVE QWPVIMGNVIQACKTHGAKLVYFDNTYMYPQTAQPQHEDAAFVPNGAKGRVRGDITQILLDEMKAGRLEAMICRAPEFYG PGQTQSITNTTAIDNLAQGKKAKVFLRDDTKRSLIYTPDASRAMALLGNTPDAYGQTWHLPCDDNRLTYKEFITLAADIF KVSARYTVVKEWQLWLAGKFNPTIRDAGELLPRYRCDNLFISDKFKARFPDFKVTRFEQGLAEIAKERKLI >Mature_311_residues MRQTILGANGQIGRELALSLNREFDCDIRLVSRKPQKVNATDELKSANLLDLAQTLAAVEGSDIVYLTAGLPMDTQLWVE QWPVIMGNVIQACKTHGAKLVYFDNTYMYPQTAQPQHEDAAFVPNGAKGRVRGDITQILLDEMKAGRLEAMICRAPEFYG PGQTQSITNTTAIDNLAQGKKAKVFLRDDTKRSLIYTPDASRAMALLGNTPDAYGQTWHLPCDDNRLTYKEFITLAADIF KVSARYTVVKEWQLWLAGKFNPTIRDAGELLPRYRCDNLFISDKFKARFPDFKVTRFEQGLAEIAKERKLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35029; Mature: 35029
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQTILGANGQIGRELALSLNREFDCDIRLVSRKPQKVNATDELKSANLLDLAQTLAAVE CCCEEECCCCCCCHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHCC GSDIVYLTAGLPMDTQLWVEQWPVIMGNVIQACKTHGAKLVYFDNTYMYPQTAQPQHEDA CCCEEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCEEECCCCCCCCCCCC AFVPNGAKGRVRGDITQILLDEMKAGRLEAMICRAPEFYGPGQTQSITNTTAIDNLAQGK EECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCC KAKVFLRDDTKRSLIYTPDASRAMALLGNTPDAYGQTWHLPCDDNRLTYKEFITLAADIF EEEEEEECCCCCCEEECCCCHHHHHEECCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHH KVSARYTVVKEWQLWLAGKFNPTIRDAGELLPRYRCDNLFISDKFKARFPDFKVTRFEQG HHHHHEEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCHHCCCCCCCHHHHHHH LAEIAKERKLI HHHHHHHCCCC >Mature Secondary Structure MRQTILGANGQIGRELALSLNREFDCDIRLVSRKPQKVNATDELKSANLLDLAQTLAAVE CCCEEECCCCCCCHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHCCCHHHHHHHHHHHCC GSDIVYLTAGLPMDTQLWVEQWPVIMGNVIQACKTHGAKLVYFDNTYMYPQTAQPQHEDA CCCEEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHCCCEEEEECCEEECCCCCCCCCCCC AFVPNGAKGRVRGDITQILLDEMKAGRLEAMICRAPEFYGPGQTQSITNTTAIDNLAQGK EECCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCC KAKVFLRDDTKRSLIYTPDASRAMALLGNTPDAYGQTWHLPCDDNRLTYKEFITLAADIF EEEEEEECCCCCCEEECCCCHHHHHEECCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHH KVSARYTVVKEWQLWLAGKFNPTIRDAGELLPRYRCDNLFISDKFKARFPDFKVTRFEQG HHHHHEEEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCHHCCCCCCCHHHHHHH LAEIAKERKLI HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA