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The map label for this gene is yjfJ [H]

Identifier: 117919279

GI number: 117919279

Start: 957797

End: 958486

Strand: Reverse

Name: yjfJ [H]

Synonym: Shewana3_0827

Alternate gene names: 117919279

Gene position: 958486-957797 (Counterclockwise)

Preceding gene: 117919280

Following gene: 117919278

Centisome position: 19.28

GC content: 47.1

Gene sequence:

>690_bases
ATGGGCATTCTGAACAAAATTTTAACAGCGTTTCGCGGTGGTGCCACCGAAGTTGGCCAAAGCATCGTAGACGCAAACTC
GACTCGAATTTTCGAACAGGAAATCCGTGATGCCGAGAAACACTTAACCAACGCCAAGCGCGAACTGACCGATGTGATGG
CGAAAGAAATGCAAGCCAGCCGTGAAGTTGACCGCTTAAAGCGCTCAATTGCCGAACACGAAGGCTATGCAACGCAAGCT
TTAGATAAAGGCAACGAAGCCTTAGCCATTGAAGTAGCTGAAAAAATTGCTCAATTAGAGCAAGAGCTGGCTGAGCAGCA
AACTGCTAATGATAGCTTCAGCGCCCATGCAGTACGTCTGAAAGATTTAGTGAAGAAAACCGAGCGTCAACTGTCTGATT
ATCAACGTCAGTTAAGCATGGTTAAAACCACTGAAAGCGTACAAAAGGCGACGGCGACCATTACCGACTCTTTTGCCTCA
AGCAACTCTAAGCTGCTGAATGCCAAAGATTCATTAGAGCGTATCAAGGCGCGTCAACAACAGTTTGACGACAGATTGAA
AGCCGCTGAAACCTTAGCCGAAGAAGGCAGCGATAAATCATTGCAGGCCAAATTAGCGGAAGCTGGCATTGGTGAGCAAA
AATCGAATGCCAACGCCGTGCTCGAACGTATCAAGGCACGTAAAAGCTAA

Upstream 100 bases:

>100_bases
TAGCATGCTCGAAATCGAGCAAGAGTTAGCAGTCTTATCCGATAACTGCTTAGAAGTTATCGATGAAATGGTCGACTATC
TGAAATAAGGAGCCACAATT

Downstream 100 bases:

>100_bases
TTCATGATTGACCAAACGCCGAGCACCGATGGGACCATCACCCCCTATTGTGCTCGGCTTTTTTGTTTTTTGTTTTAGAC
ACGCGAATATGTCCAATCAC

Product: phage shock protein A, PspA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MGILNKILTAFRGGATEVGQSIVDANSTRIFEQEIRDAEKHLTNAKRELTDVMAKEMQASREVDRLKRSIAEHEGYATQA
LDKGNEALAIEVAEKIAQLEQELAEQQTANDSFSAHAVRLKDLVKKTERQLSDYQRQLSMVKTTESVQKATATITDSFAS
SNSKLLNAKDSLERIKARQQQFDDRLKAAETLAEEGSDKSLQAKLAEAGIGEQKSNANAVLERIKARKS

Sequences:

>Translated_229_residues
MGILNKILTAFRGGATEVGQSIVDANSTRIFEQEIRDAEKHLTNAKRELTDVMAKEMQASREVDRLKRSIAEHEGYATQA
LDKGNEALAIEVAEKIAQLEQELAEQQTANDSFSAHAVRLKDLVKKTERQLSDYQRQLSMVKTTESVQKATATITDSFAS
SNSKLLNAKDSLERIKARQQQFDDRLKAAETLAEEGSDKSLQAKLAEAGIGEQKSNANAVLERIKARKS
>Mature_228_residues
GILNKILTAFRGGATEVGQSIVDANSTRIFEQEIRDAEKHLTNAKRELTDVMAKEMQASREVDRLKRSIAEHEGYATQAL
DKGNEALAIEVAEKIAQLEQELAEQQTANDSFSAHAVRLKDLVKKTERQLSDYQRQLSMVKTTESVQKATATITDSFASS
NSKLLNAKDSLERIKARQQQFDDRLKAAETLAEEGSDKSLQAKLAEAGIGEQKSNANAVLERIKARKS

Specific function: Unknown

COG id: COG1842

COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspA/IM30 family [H]

Homologues:

Organism=Escherichia coli, GI1790625, Length=229, Percent_Identity=34.061135371179, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007157 [H]

Pfam domain/function: PF04012 PspA_IM30 [H]

EC number: NA

Molecular weight: Translated: 25348; Mature: 25217

Theoretical pI: Translated: 6.83; Mature: 6.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGILNKILTAFRGGATEVGQSIVDANSTRIFEQEIRDAEKHLTNAKRELTDVMAKEMQAS
CCHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REVDRLKRSIAEHEGYATQALDKGNEALAIEVAEKIAQLEQELAEQQTANDSFSAHAVRL
HHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
KDLVKKTERQLSDYQRQLSMVKTTESVQKATATITDSFASSNSKLLNAKDSLERIKARQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
QFDDRLKAAETLAEEGSDKSLQAKLAEAGIGEQKSNANAVLERIKARKS
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
GILNKILTAFRGGATEVGQSIVDANSTRIFEQEIRDAEKHLTNAKRELTDVMAKEMQAS
CHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REVDRLKRSIAEHEGYATQALDKGNEALAIEVAEKIAQLEQELAEQQTANDSFSAHAVRL
HHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
KDLVKKTERQLSDYQRQLSMVKTTESVQKATATITDSFASSNSKLLNAKDSLERIKARQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
QFDDRLKAAETLAEEGSDKSLQAKLAEAGIGEQKSNANAVLERIKARKS
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]