Click here to switch to the map view.

The map label for this gene is ygiF [H]

Identifier: 117919275

GI number: 117919275

Start: 954034

End: 955545

Strand: Direct

Name: ygiF [H]

Synonym: Shewana3_0823

Alternate gene names: 117919275

Gene position: 954034-955545 (Clockwise)

Preceding gene: 117919270

Following gene: 117919284

Centisome position: 19.19

GC content: 51.06

Gene sequence:

>1512_bases
ATGAATGCAGAGATAGAATTAAAACTGTTTTTCCTCCCTAAGTTTCAAGAATCCTTGATAAATAAGTTAGATAGCCTGCC
AAACGCCACTCCGCAGGGAAAGCGCCGCTTAAGCAACGGTTACTTTGATACACCCGGATTACAATTACGCCAATGGGACA
TGGGGTTAAGGGTGCGCGGGTTCGATGGTCACAAAGAGCAAACCATTAAGACGGCGGGGCAAGTGGTTGGCGGGATCCAT
TCTCGTCCCGAATATAACGTCACCATTGAAGCCGACAGCCCAAATTTAAGCCTCTTTCCCGCCAATATCTGGCCCGCCAA
TGCCGATTTAGCCTCAGTGCAAGCGGCACTTGGCTGCGTATTTCACACCGATTTTTATCGCCGAGCTTGGCATGTGACTC
TCCAAGAGAGCCTTATAGAGGTTGCCTTGGACACGGGGGACATTACCGCTAATGGTCAGCATGAAGCCCTCTGCGAACTC
GAATTTGAGCTATTGTCGGGGGATGCCAGTGCCTTATTAACCTTGGCGACGCAAGTGGCCGACAGCGTCCCTGTTCGTTT
AGGTAAAGCCAGTAAGGCGCAGCGCGGCTATCGACTCGCGGGGCAATCTAAGCCGCTAACCTTAAGTGCACTCGAGTATT
TACCACTGCCCGTGCCTGAAGATCTCAACCTTCATCAGCCCCACCAACAGGATTTAATTGCCACTTGCCAAGTCTTACTG
GAAACTGCGCTCGAACGTTGGCAGTTGCTCGAAGCCATGATTGCCGAAGAACACGATAACGAAGCCGTCATTGCCCTGTG
GTGGCGGATGCGCGCCTGTATCCGTTTATTACGGATAACGCTGAGCCAGTTTGGCCTCGCTAACGCTACTTTGATGCAGC
ACTTTACTCTGATTGAATCCCAGCAGGTGTTCATTGAGGAGGCACAGGCCCTAGCAGCTTTGCTCGGTAGTCAAAAAGGC
TTATTCACTCGGCACGATGCCCGTCAAGCCTTGATGCAACAACTACAGCTGCAATTTGAGGCCATGGATATCTCTGGGCG
GTTAGACTCACTCTGGCAAAGTGTTGAATACGGTCAATTGCAGTTAGCGATTGTCGAGATCCTATTGGCGCTCAGCGCGG
GTAAGCTCGAGCTGCCCGCAGAACTTGGATTATCCCAGCATGCTGATAATGCACAGGAAGCCTCATGGCAGGCGGTTTTG
GCTGCCATGCCTAGCGATAAGACCATGACAGCCGAGGATTATTTACAGTGCGCGGCGTTACTCGATGAGAGTATTCAAGT
CGGGCAAGCCTATGGGCTTTTGTATGAAGCAAAATCCCGCGATGCTTTCAGGGCACCTTGGCAGGATTTAGTGTTAGGGA
TTAGAACCTTAGCTTGTTATCAGCAATTAACGCTGGCGGCGCAAGCCCTTGGCATCGATTTAAGCGACTGGCTTGAGGCT
AAGCAGCAAAGCTTACTTTTTGCGATGGAGGCATCGAGACAAAACGCGATGACGCAAACGACCTATTGGTAA

Upstream 100 bases:

>100_bases
CAAAACCAAATCCTACGGGATTTTTATGACACATTTGTGACATTATGAACTAAAAGTGACGCATCAATGAATCTTTGATG
ACAAAATGAGCGGTGCCGCA

Downstream 100 bases:

>100_bases
ACGGCCGATTGGTCGTCACCACTTTGAATAAAGTTTAGGAAGGCCATGCCTTCCTAATTCTTTTGGGCTTCCAATGCCTG
TTTTAACTCGGCAATTTTGG

Product: adenylate cyclase

Products: NA

Alternate protein names: ORFXE [H]

Number of amino acids: Translated: 503; Mature: 503

Protein sequence:

>503_residues
MNAEIELKLFFLPKFQESLINKLDSLPNATPQGKRRLSNGYFDTPGLQLRQWDMGLRVRGFDGHKEQTIKTAGQVVGGIH
SRPEYNVTIEADSPNLSLFPANIWPANADLASVQAALGCVFHTDFYRRAWHVTLQESLIEVALDTGDITANGQHEALCEL
EFELLSGDASALLTLATQVADSVPVRLGKASKAQRGYRLAGQSKPLTLSALEYLPLPVPEDLNLHQPHQQDLIATCQVLL
ETALERWQLLEAMIAEEHDNEAVIALWWRMRACIRLLRITLSQFGLANATLMQHFTLIESQQVFIEEAQALAALLGSQKG
LFTRHDARQALMQQLQLQFEAMDISGRLDSLWQSVEYGQLQLAIVEILLALSAGKLELPAELGLSQHADNAQEASWQAVL
AAMPSDKTMTAEDYLQCAALLDESIQVGQAYGLLYEAKSRDAFRAPWQDLVLGIRTLACYQQLTLAAQALGIDLSDWLEA
KQQSLLFAMEASRQNAMTQTTYW

Sequences:

>Translated_503_residues
MNAEIELKLFFLPKFQESLINKLDSLPNATPQGKRRLSNGYFDTPGLQLRQWDMGLRVRGFDGHKEQTIKTAGQVVGGIH
SRPEYNVTIEADSPNLSLFPANIWPANADLASVQAALGCVFHTDFYRRAWHVTLQESLIEVALDTGDITANGQHEALCEL
EFELLSGDASALLTLATQVADSVPVRLGKASKAQRGYRLAGQSKPLTLSALEYLPLPVPEDLNLHQPHQQDLIATCQVLL
ETALERWQLLEAMIAEEHDNEAVIALWWRMRACIRLLRITLSQFGLANATLMQHFTLIESQQVFIEEAQALAALLGSQKG
LFTRHDARQALMQQLQLQFEAMDISGRLDSLWQSVEYGQLQLAIVEILLALSAGKLELPAELGLSQHADNAQEASWQAVL
AAMPSDKTMTAEDYLQCAALLDESIQVGQAYGLLYEAKSRDAFRAPWQDLVLGIRTLACYQQLTLAAQALGIDLSDWLEA
KQQSLLFAMEASRQNAMTQTTYW
>Mature_503_residues
MNAEIELKLFFLPKFQESLINKLDSLPNATPQGKRRLSNGYFDTPGLQLRQWDMGLRVRGFDGHKEQTIKTAGQVVGGIH
SRPEYNVTIEADSPNLSLFPANIWPANADLASVQAALGCVFHTDFYRRAWHVTLQESLIEVALDTGDITANGQHEALCEL
EFELLSGDASALLTLATQVADSVPVRLGKASKAQRGYRLAGQSKPLTLSALEYLPLPVPEDLNLHQPHQQDLIATCQVLL
ETALERWQLLEAMIAEEHDNEAVIALWWRMRACIRLLRITLSQFGLANATLMQHFTLIESQQVFIEEAQALAALLGSQKG
LFTRHDARQALMQQLQLQFEAMDISGRLDSLWQSVEYGQLQLAIVEILLALSAGKLELPAELGLSQHADNAQEASWQAVL
AAMPSDKTMTAEDYLQCAALLDESIQVGQAYGLLYEAKSRDAFRAPWQDLVLGIRTLACYQQLTLAAQALGIDLSDWLEA
KQQSLLFAMEASRQNAMTQTTYW

Specific function: Unknown

COG id: COG3025

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1598 [H]

Homologues:

Organism=Escherichia coli, GI1789434, Length=287, Percent_Identity=39.3728222996516, Blast_Score=162, Evalue=4e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008172
- InterPro:   IPR004206 [H]

Pfam domain/function: PF01928 CYTH [H]

EC number: NA

Molecular weight: Translated: 55938; Mature: 55938

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAEIELKLFFLPKFQESLINKLDSLPNATPQGKRRLSNGYFDTPGLQLRQWDMGLRVRG
CCCEEEEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCEEEEC
FDGHKEQTIKTAGQVVGGIHSRPEYNVTIEADSPNLSLFPANIWPANADLASVQAALGCV
CCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHH
FHTDFYRRAWHVTLQESLIEVALDTGDITANGQHEALCELEFELLSGDASALLTLATQVA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
DSVPVRLGKASKAQRGYRLAGQSKPLTLSALEYLPLPVPEDLNLHQPHQQDLIATCQVLL
HCCCCCCCCCHHHHCCCEECCCCCCCEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
ETALERWQLLEAMIAEEHDNEAVIALWWRMRACIRLLRITLSQFGLANATLMQHFTLIES
HHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
QQVFIEEAQALAALLGSQKGLFTRHDARQALMQQLQLQFEAMDISGRLDSLWQSVEYGQL
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHCCHH
QLAIVEILLALSAGKLELPAELGLSQHADNAQEASWQAVLAAMPSDKTMTAEDYLQCAAL
HHHHHHHHHHHCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
LDESIQVGQAYGLLYEAKSRDAFRAPWQDLVLGIRTLACYQQLTLAAQALGIDLSDWLEA
HHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
KQQSLLFAMEASRQNAMTQTTYW
HHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNAEIELKLFFLPKFQESLINKLDSLPNATPQGKRRLSNGYFDTPGLQLRQWDMGLRVRG
CCCEEEEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCEEEEC
FDGHKEQTIKTAGQVVGGIHSRPEYNVTIEADSPNLSLFPANIWPANADLASVQAALGCV
CCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHH
FHTDFYRRAWHVTLQESLIEVALDTGDITANGQHEALCELEFELLSGDASALLTLATQVA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
DSVPVRLGKASKAQRGYRLAGQSKPLTLSALEYLPLPVPEDLNLHQPHQQDLIATCQVLL
HCCCCCCCCCHHHHCCCEECCCCCCCEEEHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH
ETALERWQLLEAMIAEEHDNEAVIALWWRMRACIRLLRITLSQFGLANATLMQHFTLIES
HHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
QQVFIEEAQALAALLGSQKGLFTRHDARQALMQQLQLQFEAMDISGRLDSLWQSVEYGQL
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHCCHH
QLAIVEILLALSAGKLELPAELGLSQHADNAQEASWQAVLAAMPSDKTMTAEDYLQCAAL
HHHHHHHHHHHCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
LDESIQVGQAYGLLYEAKSRDAFRAPWQDLVLGIRTLACYQQLTLAAQALGIDLSDWLEA
HHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
KQQSLLFAMEASRQNAMTQTTYW
HHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8412694; 9278503 [H]