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The map label for this gene is ygiM [H]

Identifier: 117919272

GI number: 117919272

Start: 951063

End: 951611

Strand: Reverse

Name: ygiM [H]

Synonym: Shewana3_0820

Alternate gene names: 117919272

Gene position: 951611-951063 (Counterclockwise)

Preceding gene: 117919273

Following gene: 117919271

Centisome position: 19.14

GC content: 50.27

Gene sequence:

>549_bases
ATGTTACTCTCCCCCAACCTGCTGGCCGAAGGCCAACCCCGTTATATCTCGGACAACGTGTTTCTTTATATTCTCAATGG
TCCGAGTACAGACTACCGTATCTTAGGCTCGATTGAAGCGGGACAACCTATTACCTTATTGGGCGAAACCCAAGGCGATT
ACTCCAAAATTGTCGACCACAAGGGTCGCGAAGGTTGGGTACCAACTAACATGATTAGTTCTACCACCAGTTTTCGCGAG
CAAGTATCGTCACTCACCAGTGAACTGGCTGAAGCCAAGGCAAAACTGGACGAAGTGATGAGCTCAACCGATAACCACGC
CGATGAAGTGGCCGAACTTAAAGCCAAGCTGACCGAAGCCGAAGCTATGCTTAACAAAACCACTCAAGAGCGTGACAGTT
TGAAAGTGGCCGTGGATCGCAGCGCTCAGGAAGCACAATTTGCCCTATGGCGTGAAGGTGGTTTGATAGCAGCGGCCGGT
TTAGTGGTGGGGGTGATTTTGGTGTATCTGCCGAGACCACAGCGCCGCAATAAAAAGCGTTGGATGTAA

Upstream 100 bases:

>100_bases
ACTTCCCTCTTGCATTGCAGGCCTCAAATCCCTAGCATGTGGTCACTATTTCGTTGATGAGAATACAAAAGTGTTAAGAA
TGCTGACTCTGGTGGGAATG

Downstream 100 bases:

>100_bases
ATTTTTACGCGAATCACCTGAAAGTAAAATCAAAAGCCAGTGTTTTCAAACACTGGCTTTTTTGTCAATTGAGCGTTACA
TCTGGCGCGTAACAAGCTAA

Product: SH3 type 3 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MLLSPNLLAEGQPRYISDNVFLYILNGPSTDYRILGSIEAGQPITLLGETQGDYSKIVDHKGREGWVPTNMISSTTSFRE
QVSSLTSELAEAKAKLDEVMSSTDNHADEVAELKAKLTEAEAMLNKTTQERDSLKVAVDRSAQEAQFALWREGGLIAAAG
LVVGVILVYLPRPQRRNKKRWM

Sequences:

>Translated_182_residues
MLLSPNLLAEGQPRYISDNVFLYILNGPSTDYRILGSIEAGQPITLLGETQGDYSKIVDHKGREGWVPTNMISSTTSFRE
QVSSLTSELAEAKAKLDEVMSSTDNHADEVAELKAKLTEAEAMLNKTTQERDSLKVAVDRSAQEAQFALWREGGLIAAAG
LVVGVILVYLPRPQRRNKKRWM
>Mature_182_residues
MLLSPNLLAEGQPRYISDNVFLYILNGPSTDYRILGSIEAGQPITLLGETQGDYSKIVDHKGREGWVPTNMISSTTSFRE
QVSSLTSELAEAKAKLDEVMSSTDNHADEVAELKAKLTEAEAMLNKTTQERDSLKVAVDRSAQEAQFALWREGGLIAAAG
LVVGVILVYLPRPQRRNKKRWM

Specific function: Unknown

COG id: COG3103

COG function: function code T; SH3 domain protein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1605 [H]

Homologues:

Organism=Escherichia coli, GI1789435, Length=124, Percent_Identity=29.0322580645161, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003646
- InterPro:   IPR013247
- InterPro:   IPR016476 [H]

Pfam domain/function: PF08239 SH3_3 [H]

EC number: NA

Molecular weight: Translated: 20136; Mature: 20136

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLSPNLLAEGQPRYISDNVFLYILNGPSTDYRILGSIEAGQPITLLGETQGDYSKIVDH
CCCCCCCCCCCCCCEECCCEEEEEECCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHC
KGREGWVPTNMISSTTSFREQVSSLTSELAEAKAKLDEVMSSTDNHADEVAELKAKLTEA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
EAMLNKTTQERDSLKVAVDRSAQEAQFALWREGGLIAAAGLVVGVILVYLPRPQRRNKKR
HHHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
WM
CC
>Mature Secondary Structure
MLLSPNLLAEGQPRYISDNVFLYILNGPSTDYRILGSIEAGQPITLLGETQGDYSKIVDH
CCCCCCCCCCCCCCEECCCEEEEEECCCCCCEEEEEECCCCCCEEEEECCCCHHHHHHHC
KGREGWVPTNMISSTTSFREQVSSLTSELAEAKAKLDEVMSSTDNHADEVAELKAKLTEA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
EAMLNKTTQERDSLKVAVDRSAQEAQFALWREGGLIAAAGLVVGVILVYLPRPQRRNKKR
HHHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
WM
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]