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The map label for this gene is dcrA [H]

Identifier: 117919191

GI number: 117919191

Start: 858135

End: 859724

Strand: Direct

Name: dcrA [H]

Synonym: Shewana3_0739

Alternate gene names: 117919191

Gene position: 858135-859724 (Clockwise)

Preceding gene: 117919189

Following gene: 117919196

Centisome position: 17.26

GC content: 47.92

Gene sequence:

>1590_bases
ATGGCCAATGTTACAGCTAAGAATGGCACCATGGGCTACGGTATTATCTTTGCGCCTATGGTCTTACTCTTATATCCCCT
CTATTGTTTAGTCACTAGTGCGCATTGGGTGGCGACGCTCTGTTTAATTGCTCTTGCCGTGATTCTTTTTTTAAACATTA
ACAAATTGAGCCGTAACTTAAGGCACTTAGAACGCGCAGCCCATCACTTAGGCGATGGGGATTTAAGTTATCAGCTCGAT
GAGAAAGATGCGGGTGTGTTTATCACGGTCGTCCACAGTATCAACCGCATGGGCGAGGATGTTAGTCGCACGATTCTCTC
CCTCGTCGATACCAGCGAGTGGATGAAGAAAGTCGCGACCGATATCAAAGCGATCAGCGAGCAGGCAAAACAGGGCGTGC
TCGAGCAGGAGCGTCAAACCGAACTGGCAGCAACGGCCATGACACAGATGGTCTCCACCGTACAAGAAGTGTCACAAAAT
GCCGCCAGTACGGCGCGAGCGGCCGATATTGCCCAAGGTTCGGCGAAACATGGTGATGAGCTAATTGGCACTATCGTAAA
TAAAATCAACGATATGAAATCGCAAATTCACCAAACTAAAGGCGTTATTGAGCATCTTGCCGACGATACTAATAGCATCA
GCAGTATTATTGAAACCATCTCCCAAGTGGCGGAGCAAACAAATCTATTGGCGCTCAATGCGGCGATTGAGAGTGCGCGT
GCCGGTGAGCATGGTCGCGGTTTTGCGGTGGTTGCCGATGAAGTGCGTAACTTAGCTAAACGCACCTCAGAGGCTACCGC
GGAAATTCAACTGCAGATTACAACCTTGCAAAAGGGCGCGCAGCAGAGCGTGGAAGTGATGCTTAAGAATGTCACCATCG
CCGACGAAACTGCCCTGATGGTGGAACAAGCTCATCAAGCCCTCGGGGATATAGTGACTCAGGTTGAAAGCATTACCGAT
ATGTCCCACCAAATCGCTACGGCATCCGAAGAGCAACATGCGGTTGCCGAAGAAATTAACAAAAATATCAGTGTGATGGC
TGATCTTGCATTAAAAAATGCGCGCCATACCAACCACACCAACTTATCCAGCCTTAAGGTGTATAACATGTCGCAGGAAA
TTGGCTCCCTGCTGCATCGATTCCATGTGGATGCCAAGTTGTTTAATTCAAGCCAAGCACAAAGCAAACAGTTTGTGAAA
TGGGGGCCTGAGCTTGATATCGGCATGCCAGAGATTAACCGTCAGCACCAACGCTTAGTTTCATTAATCAATGAATTACA
CCGGACGTTAAGTGAGGCATACGGACTCGAAGCGATTAAGCGCATCGTCCAAGGGCTGGTGGATTACACCGCGAACCATT
TCTCCTATGAAGAAGAATTGTTTGCCCGTTTTGGCTATCCTCAAACCGTGGCCCATAAGGAAAAGCATGCCCAGTTGGTT
GGTCAAGTGCTTGATTTTCAAAAGCGGGTAGCGAGAGGTGAAGATGTGGCCGATGAACTTATGGCATTTTTAAAAGCCTG
GCTCGTCAATCATATTCAAAAGAGTGATAAGGAATATACCCAATTTTTACTCGCCCATGGGGCCGAATAA

Upstream 100 bases:

>100_bases
GAACTAGTCTTAAGAGTATCAGTCACGAAATGATATTGAGATCTGAACTTTACCTAACGAGTTGTTGATTGAGTCGACTG
CATTTTGGAAGGAGCCAAAA

Downstream 100 bases:

>100_bases
CTGGCCTTGGTTTATCAGAGTTGGATTTTTGAGCGGTTAAAACTAATTTGCCACCCAGCCTTTGAAAAGGGCTTGCCATT
GTCAAAGGCAAAGGTATAAT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 529; Mature: 528

Protein sequence:

>529_residues
MANVTAKNGTMGYGIIFAPMVLLLYPLYCLVTSAHWVATLCLIALAVILFLNINKLSRNLRHLERAAHHLGDGDLSYQLD
EKDAGVFITVVHSINRMGEDVSRTILSLVDTSEWMKKVATDIKAISEQAKQGVLEQERQTELAATAMTQMVSTVQEVSQN
AASTARAADIAQGSAKHGDELIGTIVNKINDMKSQIHQTKGVIEHLADDTNSISSIIETISQVAEQTNLLALNAAIESAR
AGEHGRGFAVVADEVRNLAKRTSEATAEIQLQITTLQKGAQQSVEVMLKNVTIADETALMVEQAHQALGDIVTQVESITD
MSHQIATASEEQHAVAEEINKNISVMADLALKNARHTNHTNLSSLKVYNMSQEIGSLLHRFHVDAKLFNSSQAQSKQFVK
WGPELDIGMPEINRQHQRLVSLINELHRTLSEAYGLEAIKRIVQGLVDYTANHFSYEEELFARFGYPQTVAHKEKHAQLV
GQVLDFQKRVARGEDVADELMAFLKAWLVNHIQKSDKEYTQFLLAHGAE

Sequences:

>Translated_529_residues
MANVTAKNGTMGYGIIFAPMVLLLYPLYCLVTSAHWVATLCLIALAVILFLNINKLSRNLRHLERAAHHLGDGDLSYQLD
EKDAGVFITVVHSINRMGEDVSRTILSLVDTSEWMKKVATDIKAISEQAKQGVLEQERQTELAATAMTQMVSTVQEVSQN
AASTARAADIAQGSAKHGDELIGTIVNKINDMKSQIHQTKGVIEHLADDTNSISSIIETISQVAEQTNLLALNAAIESAR
AGEHGRGFAVVADEVRNLAKRTSEATAEIQLQITTLQKGAQQSVEVMLKNVTIADETALMVEQAHQALGDIVTQVESITD
MSHQIATASEEQHAVAEEINKNISVMADLALKNARHTNHTNLSSLKVYNMSQEIGSLLHRFHVDAKLFNSSQAQSKQFVK
WGPELDIGMPEINRQHQRLVSLINELHRTLSEAYGLEAIKRIVQGLVDYTANHFSYEEELFARFGYPQTVAHKEKHAQLV
GQVLDFQKRVARGEDVADELMAFLKAWLVNHIQKSDKEYTQFLLAHGAE
>Mature_528_residues
ANVTAKNGTMGYGIIFAPMVLLLYPLYCLVTSAHWVATLCLIALAVILFLNINKLSRNLRHLERAAHHLGDGDLSYQLDE
KDAGVFITVVHSINRMGEDVSRTILSLVDTSEWMKKVATDIKAISEQAKQGVLEQERQTELAATAMTQMVSTVQEVSQNA
ASTARAADIAQGSAKHGDELIGTIVNKINDMKSQIHQTKGVIEHLADDTNSISSIIETISQVAEQTNLLALNAAIESARA
GEHGRGFAVVADEVRNLAKRTSEATAEIQLQITTLQKGAQQSVEVMLKNVTIADETALMVEQAHQALGDIVTQVESITDM
SHQIATASEEQHAVAEEINKNISVMADLALKNARHTNHTNLSSLKVYNMSQEIGSLLHRFHVDAKLFNSSQAQSKQFVKW
GPELDIGMPEINRQHQRLVSLINELHRTLSEAYGLEAIKRIVQGLVDYTANHFSYEEELFARFGYPQTVAHKEKHAQLVG
QVLDFQKRVARGEDVADELMAFLKAWLVNHIQKSDKEYTQFLLAHGAE

Specific function: Receptor For The Attractant L-Aspartate And Related Amino And Dicarboxylic Acids. Tar Also Mediates Taxis To The Attractant Maltose VIa An Interaction With The Periplasmic Maltose Binding Protein. Tar Mediates Taxis Away From The Repellents Cobalt And Ni

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=265, Percent_Identity=32.4528301886792, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI2367378, Length=305, Percent_Identity=28.8524590163934, Blast_Score=113, Evalue=3e-26,
Organism=Escherichia coli, GI1787690, Length=318, Percent_Identity=28.3018867924528, Blast_Score=102, Evalue=5e-23,
Organism=Escherichia coli, GI1788194, Length=241, Percent_Identity=31.5352697095436, Blast_Score=101, Evalue=9e-23,
Organism=Escherichia coli, GI1789453, Length=327, Percent_Identity=30.8868501529052, Blast_Score=100, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 58438; Mature: 58307

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: PS50885 HAMP ; PS00550 HEMERYTHRINS ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANVTAKNGTMGYGIIFAPMVLLLYPLYCLVTSAHWVATLCLIALAVILFLNINKLSRNL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHLERAAHHLGDGDLSYQLDEKDAGVFITVVHSINRMGEDVSRTILSLVDTSEWMKKVAT
HHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIKAISEQAKQGVLEQERQTELAATAMTQMVSTVQEVSQNAASTARAADIAQGSAKHGDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LIGTIVNKINDMKSQIHQTKGVIEHLADDTNSISSIIETISQVAEQTNLLALNAAIESAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AGEHGRGFAVVADEVRNLAKRTSEATAEIQLQITTLQKGAQQSVEVMLKNVTIADETALM
CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHH
VEQAHQALGDIVTQVESITDMSHQIATASEEQHAVAEEINKNISVMADLALKNARHTNHT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC
NLSSLKVYNMSQEIGSLLHRFHVDAKLFNSSQAQSKQFVKWGPELDIGMPEINRQHQRLV
CCCHHEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
SLINELHRTLSEAYGLEAIKRIVQGLVDYTANHFSYEEELFARFGYPQTVAHKEKHAQLV
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHH
GQVLDFQKRVARGEDVADELMAFLKAWLVNHIQKSDKEYTQFLLAHGAE
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ANVTAKNGTMGYGIIFAPMVLLLYPLYCLVTSAHWVATLCLIALAVILFLNINKLSRNL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHLERAAHHLGDGDLSYQLDEKDAGVFITVVHSINRMGEDVSRTILSLVDTSEWMKKVAT
HHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIKAISEQAKQGVLEQERQTELAATAMTQMVSTVQEVSQNAASTARAADIAQGSAKHGDE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LIGTIVNKINDMKSQIHQTKGVIEHLADDTNSISSIIETISQVAEQTNLLALNAAIESAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AGEHGRGFAVVADEVRNLAKRTSEATAEIQLQITTLQKGAQQSVEVMLKNVTIADETALM
CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHH
VEQAHQALGDIVTQVESITDMSHQIATASEEQHAVAEEINKNISVMADLALKNARHTNHT
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC
NLSSLKVYNMSQEIGSLLHRFHVDAKLFNSSQAQSKQFVKWGPELDIGMPEINRQHQRLV
CCCHHEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
SLINELHRTLSEAYGLEAIKRIVQGLVDYTANHFSYEEELFARFGYPQTVAHKEKHAQLV
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHH
GQVLDFQKRVARGEDVADELMAFLKAWLVNHIQKSDKEYTQFLLAHGAE
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]