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The map label for this gene is yrbA [H]

Identifier: 117919135

GI number: 117919135

Start: 800559

End: 800810

Strand: Direct

Name: yrbA [H]

Synonym: Shewana3_0683

Alternate gene names: 117919135

Gene position: 800559-800810 (Clockwise)

Preceding gene: 117919134

Following gene: 117919136

Centisome position: 16.1

GC content: 46.43

Gene sequence:

>252_bases
ATGGAATGCAGCTTAATAGAACAGATTTTACGTGACGCGTTAGCACTCGATGAAGTGCACGCCAGCTCCGATGGCAGCCA
CTACAAAGTGATCGCCGTCGGTGAATGTTTTGACGGCATGAGCCGTGTAAAACAACAACAAGCCATTTATGCACCCCTGA
TGAGCTATATCGCCAGCGGTGAGTTACATGCATTAACGATTAAAACTTTCACGCCGACTCAATGGAAACGCGAGAAAATT
TTCAACAGCTAG

Upstream 100 bases:

>100_bases
CAGTTGTGCTCAGCGTCGGATCAGCTAAAAAAATTAATCGATTTATATGATTTACAGTCCTTCTTCACCGAAGAAGCGAA
TTGAAAAGGTAACGAATTTC

Downstream 100 bases:

>100_bases
TAGTGAGGAAAAGTGGATAAATTAGCGATTCAAGCAAGCCCTCCGCTTGCTGGTGATGTGATTATTTCCGGCGCTAAAAA
TGCTGCGCTGCCGATTCTGA

Product: BolA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MECSLIEQILRDALALDEVHASSDGSHYKVIAVGECFDGMSRVKQQQAIYAPLMSYIASGELHALTIKTFTPTQWKREKI
FNS

Sequences:

>Translated_83_residues
MECSLIEQILRDALALDEVHASSDGSHYKVIAVGECFDGMSRVKQQQAIYAPLMSYIASGELHALTIKTFTPTQWKREKI
FNS
>Mature_83_residues
MECSLIEQILRDALALDEVHASSDGSHYKVIAVGECFDGMSRVKQQQAIYAPLMSYIASGELHALTIKTFTPTQWKREKI
FNS

Specific function: Unknown

COG id: COG5007

COG function: function code K; Predicted transcriptional regulator, BolA superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bolA/yrbA family [H]

Homologues:

Organism=Escherichia coli, GI87082226, Length=83, Percent_Identity=56.6265060240964, Blast_Score=112, Evalue=5e-27,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002634 [H]

Pfam domain/function: PF01722 BolA [H]

EC number: NA

Molecular weight: Translated: 9319; Mature: 9319

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MECSLIEQILRDALALDEVHASSDGSHYKVIAVGECFDGMSRVKQQQAIYAPLMSYIASG
CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCC
ELHALTIKTFTPTQWKREKIFNS
CEEEEEEECCCCCHHHHHHCCCC
>Mature Secondary Structure
MECSLIEQILRDALALDEVHASSDGSHYKVIAVGECFDGMSRVKQQQAIYAPLMSYIASG
CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCC
ELHALTIKTFTPTQWKREKIFNS
CEEEEEEECCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]