Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117919091
Identifier: 117919091
GI number: 117919091
Start: 755630
End: 756295
Strand: Direct
Name: 117919091
Synonym: Shewana3_0639
Alternate gene names: NA
Gene position: 755630-756295 (Clockwise)
Preceding gene: 117919090
Following gene: 117919092
Centisome position: 15.2
GC content: 50.6
Gene sequence:
>666_bases ATGAGTGCTGCCATGAATGAGTCAAACCAAACCGTATTAGTCGGCACGGGCGCCATTATCGAACTCTTGCTAAAAGGTGA GTTTATTTGCCGCACCACCAATGAAGATGGCTGGCGCGCATTGAAAAATAACAGCACCCGCGAGCGGGTCGAGGCTTATT TGAATCAAATCAATCGCACCGTGGCTTCGGCCGCCGAGGGCGATGTGTTTTTCTGCGGTTATTTGCAGTTAGGCGAAAGT GAGCGCAAGGTGATTTCATCACAGTTTAAGGATATTTGTCAGGCACTTATCCCTATGGTGGAGTGGCTGGTATTAGTGCA GGAAGCCAGCGGCCAAGATGCCCCCCTAAGCGAAGGCGCGCCAGTACGTTTAACTGAGTTGCAAAGCCGAATTGAAGATA CGCCCGCGTTTCGTGAGCAGTTGGCCAAACTCAGCCAATACCGCTTATTCGGTTCAACCAGTACCAATAGCGATGCGCAA ATTAAGTTAGTGTTCAAGCGTTTAGTGGAGCTTGGTTATCTGGTGCGCCCTAACGTGGAAAAACAAATTTATATCGCCAC CGGCAAGCTGGATTACCTGTACGAAGTGATCCGCTTTATCGACGAGACCGAAGGCCTCAGCCTTGAAGCGCAGGCGGAAA CGGCGACGCAGCGGGATTTACTATGA
Upstream 100 bases:
>100_bases ACATTATTAATAAACAAACTAAGAAGTTGCAGGTGGTGAAGCCCAAAGCCAATCCGATTGCCGATATGTTGAGTAAACGC CTGAGCAAGGAGGCCATCTA
Downstream 100 bases:
>100_bases TGCCTTGGACGATAACGCACTGCATCAACCAAGGAGGTCGTGATGAGCAGTAACTTACATCAGGCTGGGGTGAAGCTACT CAAGCAGTTAGGTCGCCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MSAAMNESNQTVLVGTGAIIELLLKGEFICRTTNEDGWRALKNNSTRERVEAYLNQINRTVASAAEGDVFFCGYLQLGES ERKVISSQFKDICQALIPMVEWLVLVQEASGQDAPLSEGAPVRLTELQSRIEDTPAFREQLAKLSQYRLFGSTSTNSDAQ IKLVFKRLVELGYLVRPNVEKQIYIATGKLDYLYEVIRFIDETEGLSLEAQAETATQRDLL
Sequences:
>Translated_221_residues MSAAMNESNQTVLVGTGAIIELLLKGEFICRTTNEDGWRALKNNSTRERVEAYLNQINRTVASAAEGDVFFCGYLQLGES ERKVISSQFKDICQALIPMVEWLVLVQEASGQDAPLSEGAPVRLTELQSRIEDTPAFREQLAKLSQYRLFGSTSTNSDAQ IKLVFKRLVELGYLVRPNVEKQIYIATGKLDYLYEVIRFIDETEGLSLEAQAETATQRDLL >Mature_220_residues SAAMNESNQTVLVGTGAIIELLLKGEFICRTTNEDGWRALKNNSTRERVEAYLNQINRTVASAAEGDVFFCGYLQLGESE RKVISSQFKDICQALIPMVEWLVLVQEASGQDAPLSEGAPVRLTELQSRIEDTPAFREQLAKLSQYRLFGSTSTNSDAQI KLVFKRLVELGYLVRPNVEKQIYIATGKLDYLYEVIRFIDETEGLSLEAQAETATQRDLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24763; Mature: 24632
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAMNESNQTVLVGTGAIIELLLKGEFICRTTNEDGWRALKNNSTRERVEAYLNQINRT CCCCCCCCCCEEEEECHHHHHHHHCCCEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHH VASAAEGDVFFCGYLQLGESERKVISSQFKDICQALIPMVEWLVLVQEASGQDAPLSEGA HHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PVRLTELQSRIEDTPAFREQLAKLSQYRLFGSTSTNSDAQIKLVFKRLVELGYLVRPNVE CEEHHHHHHHHCCCHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCC KQIYIATGKLDYLYEVIRFIDETEGLSLEAQAETATQRDLL CEEEEEECCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCC >Mature Secondary Structure SAAMNESNQTVLVGTGAIIELLLKGEFICRTTNEDGWRALKNNSTRERVEAYLNQINRT CCCCCCCCCEEEEECHHHHHHHHCCCEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHH VASAAEGDVFFCGYLQLGESERKVISSQFKDICQALIPMVEWLVLVQEASGQDAPLSEGA HHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PVRLTELQSRIEDTPAFREQLAKLSQYRLFGSTSTNSDAQIKLVFKRLVELGYLVRPNVE CEEHHHHHHHHCCCHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCC KQIYIATGKLDYLYEVIRFIDETEGLSLEAQAETATQRDLL CEEEEEECCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA