Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117919079

Identifier: 117919079

GI number: 117919079

Start: 735102

End: 736592

Strand: Direct

Name: 117919079

Synonym: Shewana3_0626

Alternate gene names: NA

Gene position: 735102-736592 (Clockwise)

Preceding gene: 117919078

Following gene: 117919080

Centisome position: 14.78

GC content: 43.86

Gene sequence:

>1491_bases
ATGAACCTTGCTTCCCTAGAAGAGCGATTAGCAGACTATGGCTCACAGGGCTATTTTTTGCTGGAGGCATTCGTTCTTCA
GCTATTGAAGGTTGAGGCTGAAAGTAATGGTCAGGTCGTCTTTACCGATCAGAGTTCGCCCCATTCGCCAATGGATGCCT
ATGCCCCAAAAGGCTTTGGCCAAATACAACACCCATTGTCAATTGAAGTTACACGAACGCTTACTCCTAAGAAGCTTGAG
TCGATTCTTAAAACTCACTTCAATTACCGACGGAGTGAAGAGGAAGGCATTTTAATTGTTGCACTGCGTCAATTGGCGAA
GGAAAGCGATTATGTCAAGCACTTAACACAGAAAGCAGCAGGTCGCCTAATTATTTGGGGCGAAAGTGAACTTGAGCAAC
TTATCGAAAAACACAGTCAGGCGGCTGACAAGCTCGCTAGCAAACTCTTTTCACTTAGATTACAAATGGCTGTATCCCGC
AACCCAGAAGACTGGAAAGAAAAGAGGGATCAAGTTGTTTTGGAAGTAAGTGAAAGCTACCGCTCAGGAAGATTCTCGCT
TGTCCTCGGTGCAGGTGTTTCAAGCAGCGCAGGCTTGCCCGACTGGGACACACTTCTGAACTCCCTCTTCGTATCCATGC
TCACTGACGAAGATCTTAGTGACAAATCACATGATAACGAACATGTTGCAAGCATCGTCAAGCGCCTAAGACAAATTGAT
GGCCCTTCGGCTTTAATGCTGGCGAGATATATAAGGAAAGGGCTTTCCGCAGGCTCTGAGAAAGAGCAAAAAGAATTTAT
ACAAGCAGTTACGACTCGACTCTATTCATTACGAAACAAACAATACTCACTCAGTTCGCCACTAATTAAAGAGATCGCAA
GCCTTTGCACCCCGACCCGGACAGGAGCCAAGGTTAGATCTGTAATAACATACAACTTTGACGATCTTATGGAGCGAGAG
TTAGAAGCTAGGAATCTCTCAATAAGAAGCATTTTTGAAGAAGTTGAGCTGGCAGCACCTGAAGAATTACCTATCTATCA
TGTACATGGATTTCTTCCAGAAAACCGCACCAACTACTCCAACCTTGATCGAACAACGCTTGTTTTTTCTGAAGAAGGTT
ACCACCAAATATATAGTGAAGCCTACCACTGGTCCAACTTAGTCCAACTAGCAAGTCTAAAGGAAACAACTTGCCTAATG
GTGGGGCTGTCATTGACCGATCCTAACCTAAGAAGGCTTCTCGAAATCGCAGCAAAGTCAACTGATCGACCTAAACATTT
TGCATTCCTACCACGAGTGAGCTTGGAAAAGTTCACTAAAGATGATGGGAAAAATGTTGTTCGTGCGCCGACTGGAGTTT
CAAAAAGATTTCTGGATAGACACCATAGTCTCAATGAAGAAGTAATGCGTGAATTGGGCGTTAATGTAATTTGGTATGAA
TCTTATGATGAGATACCTAAGATACTCCACAGCATTGGGAAAGGCATCTAA

Upstream 100 bases:

>100_bases
TTCATGGTCAAGGTTATACAAAAACACTTAACAAACAAAGGCAAAGCGACGCGTGCCGCGCGCTTGCTTTGAACGTTAGA
TGCTTCTCGGAGAAAATTAG

Downstream 100 bases:

>100_bases
CAAATGGTTCAAATCACTCGCTCCGCTCGCTGGGACGGGCTAAAGCCCGCCCCTTAACCAAACGTTAAGAGCCCGCGTTA
ATAGGAAACTATGAGCACAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 496; Mature: 496

Protein sequence:

>496_residues
MNLASLEERLADYGSQGYFLLEAFVLQLLKVEAESNGQVVFTDQSSPHSPMDAYAPKGFGQIQHPLSIEVTRTLTPKKLE
SILKTHFNYRRSEEEGILIVALRQLAKESDYVKHLTQKAAGRLIIWGESELEQLIEKHSQAADKLASKLFSLRLQMAVSR
NPEDWKEKRDQVVLEVSESYRSGRFSLVLGAGVSSSAGLPDWDTLLNSLFVSMLTDEDLSDKSHDNEHVASIVKRLRQID
GPSALMLARYIRKGLSAGSEKEQKEFIQAVTTRLYSLRNKQYSLSSPLIKEIASLCTPTRTGAKVRSVITYNFDDLMERE
LEARNLSIRSIFEEVELAAPEELPIYHVHGFLPENRTNYSNLDRTTLVFSEEGYHQIYSEAYHWSNLVQLASLKETTCLM
VGLSLTDPNLRRLLEIAAKSTDRPKHFAFLPRVSLEKFTKDDGKNVVRAPTGVSKRFLDRHHSLNEEVMRELGVNVIWYE
SYDEIPKILHSIGKGI

Sequences:

>Translated_496_residues
MNLASLEERLADYGSQGYFLLEAFVLQLLKVEAESNGQVVFTDQSSPHSPMDAYAPKGFGQIQHPLSIEVTRTLTPKKLE
SILKTHFNYRRSEEEGILIVALRQLAKESDYVKHLTQKAAGRLIIWGESELEQLIEKHSQAADKLASKLFSLRLQMAVSR
NPEDWKEKRDQVVLEVSESYRSGRFSLVLGAGVSSSAGLPDWDTLLNSLFVSMLTDEDLSDKSHDNEHVASIVKRLRQID
GPSALMLARYIRKGLSAGSEKEQKEFIQAVTTRLYSLRNKQYSLSSPLIKEIASLCTPTRTGAKVRSVITYNFDDLMERE
LEARNLSIRSIFEEVELAAPEELPIYHVHGFLPENRTNYSNLDRTTLVFSEEGYHQIYSEAYHWSNLVQLASLKETTCLM
VGLSLTDPNLRRLLEIAAKSTDRPKHFAFLPRVSLEKFTKDDGKNVVRAPTGVSKRFLDRHHSLNEEVMRELGVNVIWYE
SYDEIPKILHSIGKGI
>Mature_496_residues
MNLASLEERLADYGSQGYFLLEAFVLQLLKVEAESNGQVVFTDQSSPHSPMDAYAPKGFGQIQHPLSIEVTRTLTPKKLE
SILKTHFNYRRSEEEGILIVALRQLAKESDYVKHLTQKAAGRLIIWGESELEQLIEKHSQAADKLASKLFSLRLQMAVSR
NPEDWKEKRDQVVLEVSESYRSGRFSLVLGAGVSSSAGLPDWDTLLNSLFVSMLTDEDLSDKSHDNEHVASIVKRLRQID
GPSALMLARYIRKGLSAGSEKEQKEFIQAVTTRLYSLRNKQYSLSSPLIKEIASLCTPTRTGAKVRSVITYNFDDLMERE
LEARNLSIRSIFEEVELAAPEELPIYHVHGFLPENRTNYSNLDRTTLVFSEEGYHQIYSEAYHWSNLVQLASLKETTCLM
VGLSLTDPNLRRLLEIAAKSTDRPKHFAFLPRVSLEKFTKDDGKNVVRAPTGVSKRFLDRHHSLNEEVMRELGVNVIWYE
SYDEIPKILHSIGKGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56301; Mature: 56301

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLASLEERLADYGSQGYFLLEAFVLQLLKVEAESNGQVVFTDQSSPHSPMDAYAPKGFG
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHCCCCCCC
QIQHPLSIEVTRTLTPKKLESILKTHFNYRRSEEEGILIVALRQLAKESDYVKHLTQKAA
CCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHC
GRLIIWGESELEQLIEKHSQAADKLASKLFSLRLQMAVSRNPEDWKEKRDQVVLEVSESY
CCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEHEEHHHH
RSGRFSLVLGAGVSSSAGLPDWDTLLNSLFVSMLTDEDLSDKSHDNEHVASIVKRLRQID
CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC
GPSALMLARYIRKGLSAGSEKEQKEFIQAVTTRLYSLRNKQYSLSSPLIKEIASLCTPTR
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC
TGAKVRSVITYNFDDLMERELEARNLSIRSIFEEVELAAPEELPIYHVHGFLPENRTNYS
CCHHHHHHEEECHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCC
NLDRTTLVFSEEGYHQIYSEAYHWSNLVQLASLKETTCLMVGLSLTDPNLRRLLEIAAKS
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCHHHHHHHHHHHCC
TDRPKHFAFLPRVSLEKFTKDDGKNVVRAPTGVSKRFLDRHHSLNEEVMRELGVNVIWYE
CCCCCCEEECCCHHHHHHCCCCCCCEEECCCCHHHHHHHHHCCCCHHHHHHHCCCEEEEC
SYDEIPKILHSIGKGI
CHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNLASLEERLADYGSQGYFLLEAFVLQLLKVEAESNGQVVFTDQSSPHSPMDAYAPKGFG
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHCCCCCCC
QIQHPLSIEVTRTLTPKKLESILKTHFNYRRSEEEGILIVALRQLAKESDYVKHLTQKAA
CCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHC
GRLIIWGESELEQLIEKHSQAADKLASKLFSLRLQMAVSRNPEDWKEKRDQVVLEVSESY
CCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEHEEHHHH
RSGRFSLVLGAGVSSSAGLPDWDTLLNSLFVSMLTDEDLSDKSHDNEHVASIVKRLRQID
CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCC
GPSALMLARYIRKGLSAGSEKEQKEFIQAVTTRLYSLRNKQYSLSSPLIKEIASLCTPTR
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCC
TGAKVRSVITYNFDDLMERELEARNLSIRSIFEEVELAAPEELPIYHVHGFLPENRTNYS
CCHHHHHHEEECHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCC
NLDRTTLVFSEEGYHQIYSEAYHWSNLVQLASLKETTCLMVGLSLTDPNLRRLLEIAAKS
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCHHHHHHHHHHHCC
TDRPKHFAFLPRVSLEKFTKDDGKNVVRAPTGVSKRFLDRHHSLNEEVMRELGVNVIWYE
CCCCCCEEECCCHHHHHHCCCCCCCEEECCCCHHHHHHHHHCCCCHHHHHHHCCCEEEEC
SYDEIPKILHSIGKGI
CHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA