Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is caiD [C]
Identifier: 117919025
GI number: 117919025
Start: 664860
End: 665666
Strand: Direct
Name: caiD [C]
Synonym: Shewana3_0572
Alternate gene names: 117919025
Gene position: 664860-665666 (Clockwise)
Preceding gene: 117919022
Following gene: 117919028
Centisome position: 13.37
GC content: 48.82
Gene sequence:
>807_bases ATGAGTGAGCCTTGTGTGCAAGTAACGATTGAGAATGGCATTGCTTATGTACAGCTCAATCGACCAGAAAAATATAATGC AATTAATTATTTAATGTTTAGCGAGTTGGATAAAGCGATCAAACGTATTAAATCAAATTCGCGTATTCGATTGGTGATTT TATCTGGAGCCGGAGGCCATTTTAGCTCGGGGCTGGACGTAAAGAGTGTGATGTCGGCACCGATGCAGGCATTTAAATTG TTGTTTAAATGGTTGCCAGGCAATGCCAATTTAGCGCAGAGAGTCTCCCTTGGCTGGCAGCGTTTACCCGTGCCAGTAAT TGCGGTGTTGGAAGGCTGCTGCTATGGTGGCGGCATGCAAATCGCCTTAGGTGCGGATTTTAGAATTGCGAGCCCAGACA GCAAGTTATCTATTATGGAAGCCAAATGGGGGCTAGTGCCGGACATGGCGGGCTTAGTGGCGCTGAGGCAAATTATGCCC AAGGATCAGGCGATGTTACTCAGTCTTACGGCCAAAGTGTTGTCGGGTGAAGAAGCTAAAAACTTGGGATTAGTGACTCA GTTAAGTGATAACCCCATGTTAAGCGCGCAGCAATTGGCTCAGGAGCTTCTCAATACCTCCCCCGATGCCGCAGCGGCGA TCAAGTTGAGCATCAACCGCAGTTGGACGGCGTCGATTCGTGCACTCCTATGCCGTGAGTCGTGGAGCCAAGTGAGACTG TTACTCGGGAAAAATCGCGCGATTGCAGCCACTCGTCAGCTAAAGGATCCCAACAAAGCCTATCAAGATCGCCAATCGGG TTGGTAG
Upstream 100 bases:
>100_bases TTTTGACTCATGTCAAAAATTAGCCTTATGTTACATCCTTTGGTGAATTATTCCAAACGTGTTAACATTTGTTCTGGCCT GACCAGTAACGGAATATTTC
Downstream 100 bases:
>100_bases TAGCATCATTCTATCTAGATAACACCATAACAACGGATTACTTAAGCTTTAGAAAAGCTTGCACCTCAATTGGCGCCGCT CATACGGGCGGCGAATCCCC
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MSEPCVQVTIENGIAYVQLNRPEKYNAINYLMFSELDKAIKRIKSNSRIRLVILSGAGGHFSSGLDVKSVMSAPMQAFKL LFKWLPGNANLAQRVSLGWQRLPVPVIAVLEGCCYGGGMQIALGADFRIASPDSKLSIMEAKWGLVPDMAGLVALRQIMP KDQAMLLSLTAKVLSGEEAKNLGLVTQLSDNPMLSAQQLAQELLNTSPDAAAAIKLSINRSWTASIRALLCRESWSQVRL LLGKNRAIAATRQLKDPNKAYQDRQSGW
Sequences:
>Translated_268_residues MSEPCVQVTIENGIAYVQLNRPEKYNAINYLMFSELDKAIKRIKSNSRIRLVILSGAGGHFSSGLDVKSVMSAPMQAFKL LFKWLPGNANLAQRVSLGWQRLPVPVIAVLEGCCYGGGMQIALGADFRIASPDSKLSIMEAKWGLVPDMAGLVALRQIMP KDQAMLLSLTAKVLSGEEAKNLGLVTQLSDNPMLSAQQLAQELLNTSPDAAAAIKLSINRSWTASIRALLCRESWSQVRL LLGKNRAIAATRQLKDPNKAYQDRQSGW >Mature_267_residues SEPCVQVTIENGIAYVQLNRPEKYNAINYLMFSELDKAIKRIKSNSRIRLVILSGAGGHFSSGLDVKSVMSAPMQAFKLL FKWLPGNANLAQRVSLGWQRLPVPVIAVLEGCCYGGGMQIALGADFRIASPDSKLSIMEAKWGLVPDMAGLVALRQIMPK DQAMLLSLTAKVLSGEEAKNLGLVTQLSDNPMLSAQQLAQELLNTSPDAAAAIKLSINRSWTASIRALLCRESWSQVRLL LGKNRAIAATRQLKDPNKAYQDRQSGW
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI70995211, Length=259, Percent_Identity=28.1853281853282, Blast_Score=89, Evalue=6e-18, Organism=Homo sapiens, GI157694516, Length=240, Percent_Identity=27.0833333333333, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI213417737, Length=240, Percent_Identity=27.0833333333333, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI194097323, Length=220, Percent_Identity=27.2727272727273, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI68989263, Length=195, Percent_Identity=26.1538461538462, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI20127408, Length=183, Percent_Identity=27.8688524590164, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI4502327, Length=245, Percent_Identity=28.9795918367347, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI157694520, Length=220, Percent_Identity=26.8181818181818, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI37594469, Length=189, Percent_Identity=26.984126984127, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI37594471, Length=189, Percent_Identity=26.984126984127, Blast_Score=65, Evalue=4e-11, Organism=Homo sapiens, GI31542718, Length=178, Percent_Identity=26.4044943820225, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI221142681, Length=221, Percent_Identity=33.0316742081448, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1787660, Length=224, Percent_Identity=32.1428571428571, Blast_Score=88, Evalue=6e-19, Organism=Escherichia coli, GI1790281, Length=176, Percent_Identity=27.8409090909091, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1788682, Length=198, Percent_Identity=28.2828282828283, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1787659, Length=260, Percent_Identity=25.3846153846154, Blast_Score=69, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17540714, Length=250, Percent_Identity=29.6, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17536985, Length=210, Percent_Identity=28.5714285714286, Blast_Score=91, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17560910, Length=175, Percent_Identity=27.4285714285714, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17558304, Length=288, Percent_Identity=25.6944444444444, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI25145438, Length=256, Percent_Identity=24.609375, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17554946, Length=257, Percent_Identity=22.9571984435798, Blast_Score=73, Evalue=1e-13, Organism=Caenorhabditis elegans, GI25141363, Length=214, Percent_Identity=26.1682242990654, Blast_Score=70, Evalue=8e-13, Organism=Caenorhabditis elegans, GI25144276, Length=242, Percent_Identity=27.2727272727273, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17508953, Length=242, Percent_Identity=27.2727272727273, Blast_Score=68, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17508951, Length=242, Percent_Identity=27.2727272727273, Blast_Score=67, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6320241, Length=204, Percent_Identity=27.4509803921569, Blast_Score=76, Evalue=5e-15, Organism=Drosophila melanogaster, GI24653139, Length=254, Percent_Identity=28.740157480315, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI19920382, Length=215, Percent_Identity=24.6511627906977, Blast_Score=81, Evalue=9e-16, Organism=Drosophila melanogaster, GI19922422, Length=251, Percent_Identity=25.8964143426295, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI20129971, Length=220, Percent_Identity=24.0909090909091, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI24653477, Length=220, Percent_Identity=24.0909090909091, Blast_Score=76, Evalue=3e-14, Organism=Drosophila melanogaster, GI21357171, Length=181, Percent_Identity=24.8618784530387, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI28571730, Length=194, Percent_Identity=29.3814432989691, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI28571729, Length=194, Percent_Identity=29.3814432989691, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI19921000, Length=230, Percent_Identity=28.2608695652174, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI24583077, Length=230, Percent_Identity=28.2608695652174, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI24583079, Length=230, Percent_Identity=28.2608695652174, Blast_Score=68, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 29311; Mature: 29179
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: PS00166 ENOYL_COA_HYDRATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPCVQVTIENGIAYVQLNRPEKYNAINYLMFSELDKAIKRIKSNSRIRLVILSGAGGH CCCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC FSSGLDVKSVMSAPMQAFKLLFKWLPGNANLAQRVSLGWQRLPVPVIAVLEGCCYGGGMQ CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHCCHHHHHHHHHHCCCCCEE IALGADFRIASPDSKLSIMEAKWGLVPDMAGLVALRQIMPKDQAMLLSLTAKVLSGEEAK EEECCCEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC NLGLVTQLSDNPMLSAQQLAQELLNTSPDAAAAIKLSINRSWTASIRALLCRESWSQVRL CCCEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHH LLGKNRAIAATRQLKDPNKAYQDRQSGW HHCCCCCEEHHHHCCCCHHHHHHHCCCC >Mature Secondary Structure SEPCVQVTIENGIAYVQLNRPEKYNAINYLMFSELDKAIKRIKSNSRIRLVILSGAGGH CCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC FSSGLDVKSVMSAPMQAFKLLFKWLPGNANLAQRVSLGWQRLPVPVIAVLEGCCYGGGMQ CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCHHHCCHHHHHHHHHHCCCCCEE IALGADFRIASPDSKLSIMEAKWGLVPDMAGLVALRQIMPKDQAMLLSLTAKVLSGEEAK EEECCCEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC NLGLVTQLSDNPMLSAQQLAQELLNTSPDAAAAIKLSINRSWTASIRALLCRESWSQVRL CCCEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHH LLGKNRAIAATRQLKDPNKAYQDRQSGW HHCCCCCEEHHHHCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA