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The map label for this gene is yrhP [H]

Identifier: 117918985

GI number: 117918985

Start: 625299

End: 625910

Strand: Direct

Name: yrhP [H]

Synonym: Shewana3_0531

Alternate gene names: 117918985

Gene position: 625299-625910 (Clockwise)

Preceding gene: 117918983

Following gene: 117918986

Centisome position: 12.58

GC content: 41.99

Gene sequence:

>612_bases
ATGGAGTTATTGAGTATTGTGATATTTGGGCTGTTGATTGTGGTTAGCCCTGGTGCCGATTTTGTGTTGGTCTTTAAAAA
TAGTGCCATGTATGGCAGAAAAGCGGGGATGTTAACGGCCCTTGGAATTGGCGCGGGAGTTTGTGTCCATATTAGCTATT
CAATCATTGGGATAAGTCAGTTAATTGCCAACAATGCCGGGTTATTTAGCCTAGTGAAATATGTGGGGGCAGCGTATTTA
ATCTATCTTGGGATCACTGGTTTATTGAGTGCCAAGCTAACCTTCGATTACGGGACTACGCTTATTAAACCGGTAGAAAA
TCGAAAGTACATTATGCAAGGATTTTTATGTAATGTACTGAATCCTAAAACGATGATTTTCTTCTTAAGTGTATTTAGCC
AGCTGATTTCATCCCATAGTGACGGCTTAGCATTCGTCATCAGCTATGGTGTCTATATCGCAGTGTTACACGGGGTCTGG
TTTTGCATCGTCGCATACTTAGTGACATCAGCCAAAGCCACTCGAGTATTGAAACGGTTTGGTCATAGGATTAATCAGGC
CTGTGGTGTGGGTCTGATTACCTTTGGGGCAATATTATCAACTAACGCTTGA

Upstream 100 bases:

>100_bases
TATGTGACTTTTTCTCACTGTTTTGGTGCCTTCTTTTCGATTATAACTCACCAGCGACTCGATACAATTACCGCTTGCTA
ATGAACCCTGAGGAGCGGAA

Downstream 100 bases:

>100_bases
AGCTGATTTCTTCCCTCTACGGCGATAGGTTTTTGTCCTGTTTTTAACTCGGTCTAAAGTTGACTTAAATTCACAGTTAA
TTTGAGATCGCCTAAGGGGA

Product: lysine exporter protein LysE/YggA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MELLSIVIFGLLIVVSPGADFVLVFKNSAMYGRKAGMLTALGIGAGVCVHISYSIIGISQLIANNAGLFSLVKYVGAAYL
IYLGITGLLSAKLTFDYGTTLIKPVENRKYIMQGFLCNVLNPKTMIFFLSVFSQLISSHSDGLAFVISYGVYIAVLHGVW
FCIVAYLVTSAKATRVLKRFGHRINQACGVGLITFGAILSTNA

Sequences:

>Translated_203_residues
MELLSIVIFGLLIVVSPGADFVLVFKNSAMYGRKAGMLTALGIGAGVCVHISYSIIGISQLIANNAGLFSLVKYVGAAYL
IYLGITGLLSAKLTFDYGTTLIKPVENRKYIMQGFLCNVLNPKTMIFFLSVFSQLISSHSDGLAFVISYGVYIAVLHGVW
FCIVAYLVTSAKATRVLKRFGHRINQACGVGLITFGAILSTNA
>Mature_203_residues
MELLSIVIFGLLIVVSPGADFVLVFKNSAMYGRKAGMLTALGIGAGVCVHISYSIIGISQLIANNAGLFSLVKYVGAAYL
IYLGITGLLSAKLTFDYGTTLIKPVENRKYIMQGFLCNVLNPKTMIFFLSVFSQLISSHSDGLAFVISYGVYIAVLHGVW
FCIVAYLVTSAKATRVLKRFGHRINQACGVGLITFGAILSTNA

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

Organism=Escherichia coli, GI1786522, Length=145, Percent_Identity=28.2758620689655, Blast_Score=75, Evalue=2e-15,
Organism=Escherichia coli, GI1788099, Length=196, Percent_Identity=29.5918367346939, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI48994978, Length=200, Percent_Identity=28, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI48994979, Length=142, Percent_Identity=26.7605633802817, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004778
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 21804; Mature: 21804

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELLSIVIFGLLIVVSPGADFVLVFKNSAMYGRKAGMLTALGIGAGVCVHISYSIIGISQ
CHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCCEEEEEHHHHHHHHH
LIANNAGLFSLVKYVGAAYLIYLGITGLLSAKLTFDYGTTLIKPVENRKYIMQGFLCNVL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHCCCCCHHHHHHHHHHHHC
NPKTMIFFLSVFSQLISSHSDGLAFVISYGVYIAVLHGVWFCIVAYLVTSAKATRVLKRF
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GHRINQACGVGLITFGAILSTNA
HHHHHHHHCCHHHHHHHHHHCCC
>Mature Secondary Structure
MELLSIVIFGLLIVVSPGADFVLVFKNSAMYGRKAGMLTALGIGAGVCVHISYSIIGISQ
CHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCCEEEEEHHHHHHHHH
LIANNAGLFSLVKYVGAAYLIYLGITGLLSAKLTFDYGTTLIKPVENRKYIMQGFLCNVL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHCCCCCHHHHHHHHHHHHC
NPKTMIFFLSVFSQLISSHSDGLAFVISYGVYIAVLHGVWFCIVAYLVTSAKATRVLKRF
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GHRINQACGVGLITFGAILSTNA
HHHHHHHHCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377; 9308178 [H]