Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117918958
Identifier: 117918958
GI number: 117918958
Start: 595234
End: 596148
Strand: Direct
Name: 117918958
Synonym: Shewana3_0504
Alternate gene names: NA
Gene position: 595234-596148 (Clockwise)
Preceding gene: 117918957
Following gene: 117918961
Centisome position: 11.97
GC content: 32.02
Gene sequence:
>915_bases ATGATTAAAAATTTTATATACCTCGATGAACCTAAGTTGTACTCATTCTCTTCACAGTTATTTGAAGGTGTTACTGAATA TGTTTTAAACAATGAATATCTTGAGAACTCCGAAGATGATAAGCAAAAAGGAACAATAGCATCCGGTAGAGTAATCGCAA ATGTAATTAGAGAAGCATCTAGTTCTACTACAAAAAAATTTTTACATGACCATTCATTTAATTTATTTGAAAAAGAGTTG ATTTCAAGTGGAAAAATGCTGGATGTAGCAGAAGATAGACCATCATTTATTGAACTTTGTGAAACTGAAAAATCATTTGT TCGTCTAAGGGCTAAAGGTAAATTTGTTGATTTAATAGAAATAAAATCACTGTTTAGTAACTTTAGCCAAATTAGTGAAG CTTTAGCAGTTCTTCCAAATACTGAAAATCTTCAGTTACTTGAAAAAATGAAAGCGATAAACAAGAATTCCCCTGATGTG AAGCGGATGCAGTCTGAGTTAGATCTGAAGTTAAATAAAGATATTGCAGAATTAAGTGCTTCAATGCCTAAACGGTCTGT AAATGGTTTTGAAACGATTATAGATAATTTTGGTGATGATATTGTTAGATTTCAACAGTGTATAGGTGATGTTATTTTCT CTACTTGTTTATCGCAAGAACATTTACGTGATTCATTAAAGACAATTTATCGCAAGTATTCTCGAAAAACCGCAAAAGAG TTTGTTGTAATTGGTTTTATTAGTCATGGTGATGGAACTCAGATACCTGAGGTTAAAGAAATCCCTGATGGAACTAGCAT GATTGGACATATGATCGGAATGGCTGAGAATCTATATCAACTGGAGCAGAGCTTTCATAGTAAAGGTGATAATGAAGTAA TTATTGAGCCTGTAGCAATTTATACAGAACTCTAA
Upstream 100 bases:
>100_bases ATACGCATCGTATTCGCTCGCGTGAAAAGTTTAAAAATGAGAGTAAAGCGAAACTGGATGCAGCAAATGAACGATATAGA CATAAGAAAAGGATTGGTCG
Downstream 100 bases:
>100_bases TGCATGTAACTTCGCTAGGGGCGGCAAGGGAGATCCAAGAGGGGATTGCTGTTGATCCCCTCTTGGTCGGGTGTGGGTTG AAGACCCACGACTTTAATCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MIKNFIYLDEPKLYSFSSQLFEGVTEYVLNNEYLENSEDDKQKGTIASGRVIANVIREASSSTTKKFLHDHSFNLFEKEL ISSGKMLDVAEDRPSFIELCETEKSFVRLRAKGKFVDLIEIKSLFSNFSQISEALAVLPNTENLQLLEKMKAINKNSPDV KRMQSELDLKLNKDIAELSASMPKRSVNGFETIIDNFGDDIVRFQQCIGDVIFSTCLSQEHLRDSLKTIYRKYSRKTAKE FVVIGFISHGDGTQIPEVKEIPDGTSMIGHMIGMAENLYQLEQSFHSKGDNEVIIEPVAIYTEL
Sequences:
>Translated_304_residues MIKNFIYLDEPKLYSFSSQLFEGVTEYVLNNEYLENSEDDKQKGTIASGRVIANVIREASSSTTKKFLHDHSFNLFEKEL ISSGKMLDVAEDRPSFIELCETEKSFVRLRAKGKFVDLIEIKSLFSNFSQISEALAVLPNTENLQLLEKMKAINKNSPDV KRMQSELDLKLNKDIAELSASMPKRSVNGFETIIDNFGDDIVRFQQCIGDVIFSTCLSQEHLRDSLKTIYRKYSRKTAKE FVVIGFISHGDGTQIPEVKEIPDGTSMIGHMIGMAENLYQLEQSFHSKGDNEVIIEPVAIYTEL >Mature_304_residues MIKNFIYLDEPKLYSFSSQLFEGVTEYVLNNEYLENSEDDKQKGTIASGRVIANVIREASSSTTKKFLHDHSFNLFEKEL ISSGKMLDVAEDRPSFIELCETEKSFVRLRAKGKFVDLIEIKSLFSNFSQISEALAVLPNTENLQLLEKMKAINKNSPDV KRMQSELDLKLNKDIAELSASMPKRSVNGFETIIDNFGDDIVRFQQCIGDVIFSTCLSQEHLRDSLKTIYRKYSRKTAKE FVVIGFISHGDGTQIPEVKEIPDGTSMIGHMIGMAENLYQLEQSFHSKGDNEVIIEPVAIYTEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34521; Mature: 34521
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKNFIYLDEPKLYSFSSQLFEGVTEYVLNNEYLENSEDDKQKGTIASGRVIANVIREAS CCCCCEEECCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHCCCCHHHHHHHHHHHHHH SSTTKKFLHDHSFNLFEKELISSGKMLDVAEDRPSFIELCETEKSFVRLRAKGKFVDLIE HHHHHHHHHHCCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH IKSLFSNFSQISEALAVLPNTENLQLLEKMKAINKNSPDVKRMQSELDLKLNKDIAELSA HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCHHCCCHHHHHH SMPKRSVNGFETIIDNFGDDIVRFQQCIGDVIFSTCLSQEHLRDSLKTIYRKYSRKTAKE HCCHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH FVVIGFISHGDGTQIPEVKEIPDGTSMIGHMIGMAENLYQLEQSFHSKGDNEVIIEPVAI EEEEEEEECCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHH YTEL HCCC >Mature Secondary Structure MIKNFIYLDEPKLYSFSSQLFEGVTEYVLNNEYLENSEDDKQKGTIASGRVIANVIREAS CCCCCEEECCCCHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHCCCCHHHHHHHHHHHHHH SSTTKKFLHDHSFNLFEKELISSGKMLDVAEDRPSFIELCETEKSFVRLRAKGKFVDLIE HHHHHHHHHHCCCHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH IKSLFSNFSQISEALAVLPNTENLQLLEKMKAINKNSPDVKRMQSELDLKLNKDIAELSA HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCHHCCCHHHHHH SMPKRSVNGFETIIDNFGDDIVRFQQCIGDVIFSTCLSQEHLRDSLKTIYRKYSRKTAKE HCCHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH FVVIGFISHGDGTQIPEVKEIPDGTSMIGHMIGMAENLYQLEQSFHSKGDNEVIIEPVAI EEEEEEEECCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHH YTEL HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA