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The map label for this gene is yraQ [C]

Identifier: 117918900

GI number: 117918900

Start: 518198

End: 519691

Strand: Direct

Name: yraQ [C]

Synonym: Shewana3_0443

Alternate gene names: 117918900

Gene position: 518198-519691 (Clockwise)

Preceding gene: 117918899

Following gene: 117918902

Centisome position: 10.42

GC content: 53.75

Gene sequence:

>1494_bases
ATGTTATTGAAGAATTTTATCGATCTGTTTTTAGATTCCGCCCCTTGGCTATTGCTCGGCTTGATTCTGGCGGGCTTACT
CAAAGTGTTTGTGCCTATGGCGTGGATGCAAAAGCAGCTCGGCGGACATGGCTTTAAAACCGTGGTTAAGGCGGCGTTAT
TGGGCGCGCCTTTACCTCTGTGTTCCTGCGGTGTGATCCCTGCCGCCGTTGGGCTGCGCCGCTCAGGCGCGTCGAAAGCG
GCAACCACTTCCTTTTTAGTCTCGACACCTGAGACTGGGGTCGACTCTGTGACCGTTTCCTATGTCTTACTCGGCCCGTT
TATGGCGATAGTGCGGCCGATTGCGGCGATCACTAGCGCTATTGTCGCGGGTCTTTTAGTCGGGCGTGATGATGACGATG
GCAAGCCAGCGGCTAAGGCCGAGGCCCAGTTAGACAAGGCCCAGTCAGGTAAGGCATTAGCTAGCGCTGCTCCTGTTGCT
TCATGCTGTGCTTCAAAATCTTCGTCGGCGGAGACAGTGGTAAAAGCCGAAGCGGTAAAAAGCTGCTGCGCATCGACTAA
GGCGCCTGCAATTACGCCAGTTAAGTCTTCCTGCTGCAGCAGTGATGATGCGAAAGCACCAGCAACTGAGCCCAAAATCA
AAATGACACCTATGGCGGCGCCAAGCTTAATGGCAACTGGTGGCCCAACAGTCGGTATGGTTAATGTCGCTAAGGGTGAT
GGAGCTAAGGCTAATCCTGTTAAGGTGGAAAGCGCAGGTTCATGCTGTGGCACTCAAACCGCTGCGCCCGAAAAAATCGT
GGTGGTGAAGAAAGGCGCCTGTTGTGGCACTAGTTCGAAGGCGACTGATAGCCATCAAGCAGAAGGCGAGAGCTGCTGTG
CGTCTACGCAGGATATGGCGACTGAGCTTAAGTCAGAATCTGTGATTGCGCGTATCGGACTTGGGCTTAAATATGCGGCG
ACGGATCTGGTGCGTGATACGACCCTCTGGTTGCTGGTGGGCTTATTCTTCGCGGCATTAGTACAAACCTATGTTCCTGC
TGACTTTTTAGCTAAGTGGGGCGATGGATTATTGGCCATGCTGGTGATGGTGCTAGTGTCTGTACCTATGTATATCTGCG
CCACGGCTTCGACGCCGATTGCGGCGGGCTTGTTGCTCGCAGGCGTGTCCCCCGGTGCCGTGCTGGTGTTTATGATGGCA
GGCCCTGCGACCAATATTGCCACCTTAGGCGTAGTGACTAAGGAGCTGGGTAAGCGTGCGCTCTACGGTTATCTTGGCGG
TGTGTTAGGTGTTGCCTTAGTTGCTGGAGCCTTAGTGAATTATCTAGTGGCCAACTTTGGTTTTGAGGTGATGCCACAGA
TTGGTGAGCAGCACCAAATGTTGCCCGAGTGGTTAGTCGCTGCCTCTGGCATAGTGCTCGCCTTGCTGATGGCGAAAGTG
GTGTTCGAGAAAATCCCTCGTAGTTGGCTGCGTCGCAGTGACTGCTGTTCATAG

Upstream 100 bases:

>100_bases
TTTTAGAAGCGCTAGAGTCGAGTACCGAACAAGTACGCGTTGAGCATGACCATGGCGCTACAGATTGCACCACAACCCTA
GATAAGTCAGGGAATTAATT

Downstream 100 bases:

>100_bases
CGCTGACGCTAAATAAAAATCCCCAGCAATGACTGGGGATTTTTTATGGTAAAGCCTAATACGCATCGCTAGTGGCAAAT
AGCTTACTAGCGATGCTTAG

Product: permease

Products: NA

Alternate protein names: Permease Family

Number of amino acids: Translated: 497; Mature: 497

Protein sequence:

>497_residues
MLLKNFIDLFLDSAPWLLLGLILAGLLKVFVPMAWMQKQLGGHGFKTVVKAALLGAPLPLCSCGVIPAAVGLRRSGASKA
ATTSFLVSTPETGVDSVTVSYVLLGPFMAIVRPIAAITSAIVAGLLVGRDDDDGKPAAKAEAQLDKAQSGKALASAAPVA
SCCASKSSSAETVVKAEAVKSCCASTKAPAITPVKSSCCSSDDAKAPATEPKIKMTPMAAPSLMATGGPTVGMVNVAKGD
GAKANPVKVESAGSCCGTQTAAPEKIVVVKKGACCGTSSKATDSHQAEGESCCASTQDMATELKSESVIARIGLGLKYAA
TDLVRDTTLWLLVGLFFAALVQTYVPADFLAKWGDGLLAMLVMVLVSVPMYICATASTPIAAGLLLAGVSPGAVLVFMMA
GPATNIATLGVVTKELGKRALYGYLGGVLGVALVAGALVNYLVANFGFEVMPQIGEQHQMLPEWLVAASGIVLALLMAKV
VFEKIPRSWLRRSDCCS

Sequences:

>Translated_497_residues
MLLKNFIDLFLDSAPWLLLGLILAGLLKVFVPMAWMQKQLGGHGFKTVVKAALLGAPLPLCSCGVIPAAVGLRRSGASKA
ATTSFLVSTPETGVDSVTVSYVLLGPFMAIVRPIAAITSAIVAGLLVGRDDDDGKPAAKAEAQLDKAQSGKALASAAPVA
SCCASKSSSAETVVKAEAVKSCCASTKAPAITPVKSSCCSSDDAKAPATEPKIKMTPMAAPSLMATGGPTVGMVNVAKGD
GAKANPVKVESAGSCCGTQTAAPEKIVVVKKGACCGTSSKATDSHQAEGESCCASTQDMATELKSESVIARIGLGLKYAA
TDLVRDTTLWLLVGLFFAALVQTYVPADFLAKWGDGLLAMLVMVLVSVPMYICATASTPIAAGLLLAGVSPGAVLVFMMA
GPATNIATLGVVTKELGKRALYGYLGGVLGVALVAGALVNYLVANFGFEVMPQIGEQHQMLPEWLVAASGIVLALLMAKV
VFEKIPRSWLRRSDCCS
>Mature_497_residues
MLLKNFIDLFLDSAPWLLLGLILAGLLKVFVPMAWMQKQLGGHGFKTVVKAALLGAPLPLCSCGVIPAAVGLRRSGASKA
ATTSFLVSTPETGVDSVTVSYVLLGPFMAIVRPIAAITSAIVAGLLVGRDDDDGKPAAKAEAQLDKAQSGKALASAAPVA
SCCASKSSSAETVVKAEAVKSCCASTKAPAITPVKSSCCSSDDAKAPATEPKIKMTPMAAPSLMATGGPTVGMVNVAKGD
GAKANPVKVESAGSCCGTQTAAPEKIVVVKKGACCGTSSKATDSHQAEGESCCASTQDMATELKSESVIARIGLGLKYAA
TDLVRDTTLWLLVGLFFAALVQTYVPADFLAKWGDGLLAMLVMVLVSVPMYICATASTPIAAGLLLAGVSPGAVLVFMMA
GPATNIATLGVVTKELGKRALYGYLGGVLGVALVAGALVNYLVANFGFEVMPQIGEQHQMLPEWLVAASGIVLALLMAKV
VFEKIPRSWLRRSDCCS

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50886; Mature: 50886

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLKNFIDLFLDSAPWLLLGLILAGLLKVFVPMAWMQKQLGGHGFKTVVKAALLGAPLPL
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCH
CSCGVIPAAVGLRRSGASKAATTSFLVSTPETGVDSVTVSYVLLGPFMAIVRPIAAITSA
HHCCHHHHHHHHHCCCCCHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IVAGLLVGRDDDDGKPAAKAEAQLDKAQSGKALASAAPVASCCASKSSSAETVVKAEAVK
HHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
SCCASTKAPAITPVKSSCCSSDDAKAPATEPKIKMTPMAAPSLMATGGPTVGMVNVAKGD
HHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEECCCCCCCCEECCCCCEEEEEEECCC
GAKANPVKVESAGSCCGTQTAAPEKIVVVKKGACCGTSSKATDSHQAEGESCCASTQDMA
CCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHCCCHHHHCCHHHHH
TELKSESVIARIGLGLKYAATDLVRDTTLWLLVGLFFAALVQTYVPADFLAKWGDGLLAM
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHH
LVMVLVSVPMYICATASTPIAAGLLLAGVSPGAVLVFMMAGPATNIATLGVVTKELGKRA
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHH
LYGYLGGVLGVALVAGALVNYLVANFGFEVMPQIGEQHQMLPEWLVAASGIVLALLMAKV
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
VFEKIPRSWLRRSDCCS
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLLKNFIDLFLDSAPWLLLGLILAGLLKVFVPMAWMQKQLGGHGFKTVVKAALLGAPLPL
CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCH
CSCGVIPAAVGLRRSGASKAATTSFLVSTPETGVDSVTVSYVLLGPFMAIVRPIAAITSA
HHCCHHHHHHHHHCCCCCHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IVAGLLVGRDDDDGKPAAKAEAQLDKAQSGKALASAAPVASCCASKSSSAETVVKAEAVK
HHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
SCCASTKAPAITPVKSSCCSSDDAKAPATEPKIKMTPMAAPSLMATGGPTVGMVNVAKGD
HHHHCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEECCCCCCCCEECCCCCEEEEEEECCC
GAKANPVKVESAGSCCGTQTAAPEKIVVVKKGACCGTSSKATDSHQAEGESCCASTQDMA
CCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHCCCHHHHCCHHHHH
TELKSESVIARIGLGLKYAATDLVRDTTLWLLVGLFFAALVQTYVPADFLAKWGDGLLAM
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHH
LVMVLVSVPMYICATASTPIAAGLLLAGVSPGAVLVFMMAGPATNIATLGVVTKELGKRA
HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHH
LYGYLGGVLGVALVAGALVNYLVANFGFEVMPQIGEQHQMLPEWLVAASGIVLALLMAKV
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
VFEKIPRSWLRRSDCCS
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA