Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is ilvA [H]
Identifier: 117918816
GI number: 117918816
Start: 396057
End: 397700
Strand: Direct
Name: ilvA [H]
Synonym: Shewana3_0359
Alternate gene names: 117918816
Gene position: 396057-397700 (Clockwise)
Preceding gene: 117918815
Following gene: 117918817
Centisome position: 7.97
GC content: 53.77
Gene sequence:
>1644_bases ATGTTATCTCTCGCATCGTCGCAAACGGAGCAGGCTGAGGCGCAGGCCTCTCAGTCGAAGCCGGGCACTTCTGCCTTAGA AAAGAGTCAGCTTGCGCAAAGCTACCTGCAAAAAATCCTGCTGTCGTCGGTTTATGACGTTGCGAAAGTGACGCCACTCT CGAGCCTGAATAAACTTTCGGCGCGTTTGGGCTGCCAAGTATTTTTAAAGCGTGAGGATATGCAGCCAGTGCATTCCTTC AAGTTGCGCGGCGCCTATAACCGTATCGCCCAGTTAAGCCAAGCCGAATGTCAACGCGGCGTAGTGTGCGCCTCGGCGGG TAACCATGCTCAAGGCGTGGCCATGTCGGCGGCCAGTCGTGGTGTGGATGCTGTGATTGTGATGCCCGAAACTACGCCGG ATATCAAAGTCGATGCTGTGCGCCGCTTGGGCGGCAACGTAGTGTTGCACGGCCAAGCCTTCGATCAGGCCAATGGCTTT GCGATGGAGATGGCAAAGCTGGAGGGTCGGGTGTATATCGCCCCCTTCGATGACGAAGCCGTTATCGCAGGCCAAGGCAC TATCGCCCAAGAAATGCTGCAACAGCAGCGCGACCTTGAAGTGGTATTTGTGCCCGTGGGCGGCGGTGGCTTAATTGCTG GGATTGCGGCCTATTACAAGGCGGTGATGCCACAGGTCAAAATTGTTGGGGTGGAGCCTGAAGATGCGGCTTGCTTAAAA GCGGCGATGGAGGCGGGCGAGCCTGTCACACTTGCGCAAGTTGGCTTGTTTGCCGATGGGGTCGCGGTTAAACGTATCGG CACAGAGCCATTTCGCTTAGCTAAGTGGTTTGTGGATGAAGTGGTGACGGTAACGTCCGACGAAATCTGCGCTGCTGTAA AAGATATTTTTGAGGATACCCGCGCCATTGCCGAACCTGCTGGCGCCTTATCCCTTGCGGGGCTTAAAAAATACGTCAGC ACCAATGCCGCAGGCGAGAGTGGCAAGGGGGAAAAAGTCGCGGCGATATTAAGTGGCGCGAATGTGAACTTCCATAGCCT ACGTTATGTATCGGAGCGCTGCGAGTTGGGTGAGCAAAAAGAAGCCGTGCTGGCGGTTAAAGTGCCCGAGCGTCCCGGCA GCTTCCTGCGTTTTTGTGAGTTGCTCGAAAAGCGGGTGATGACCGAATTTAACTATCGCTTTAGTAGCCGCGATATGGCG GTGGTGTTTGCGGGTATTCGTCTGACCAAAGGCCATGGCGAATTAGAGCAGATCATCAATACCTTAGAAGATAATGGCTT CGAGGTGCAGGACTTATCCGGTGACGAAACCGCGAAATTGCATGTGCGTTATATGGTCGGTGGTCATCCGCCAGAGCCGT TAGAGGAGCGCCTATTTAGCTTCGAGTTTCCCGAGCATCCGGGGGCGCTGCTGAAGTTTTTAACTACCCTGCAGAGCAAG TGGAATATCAGTTTATTCCATTACCGTAATCACGGCGCGGCCTTTGGGCGAGTGCTGGCGGGGTTCGAAGTTCCCGAGGG CGATGCCTTGCCGTTTCAGCAGTTTTTAACTGAGCTGGGATTTGTCTATCAAGAAGAGACGCAAAGCCCTGCTTATCAAC TATTTTTGAATGCTGGAAAAGGAAAAAAGAGCCTGCCTTTGTAA
Upstream 100 bases:
>100_bases CGTCAGCGTTATGTGTCGATGGCGCTCAAAGCCTACGCCATGCTTGCCACCAGTGCCGATAAGGGCGCGGTGCGCGATCG CAGTAAGTTGGAGGACTGAT
Downstream 100 bases:
>100_bases TCACTTAGCTTTAGGTTACAACTTAGGCTAAAGGAGGGGCGCACAGGCGCCCCTTTTTGTGGTAGTTTGGTTTAACAAGT TAAGAGTGAATGCTCTAGTC
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MLSLASSQTEQAEAQASQSKPGTSALEKSQLAQSYLQKILLSSVYDVAKVTPLSSLNKLSARLGCQVFLKREDMQPVHSF KLRGAYNRIAQLSQAECQRGVVCASAGNHAQGVAMSAASRGVDAVIVMPETTPDIKVDAVRRLGGNVVLHGQAFDQANGF AMEMAKLEGRVYIAPFDDEAVIAGQGTIAQEMLQQQRDLEVVFVPVGGGGLIAGIAAYYKAVMPQVKIVGVEPEDAACLK AAMEAGEPVTLAQVGLFADGVAVKRIGTEPFRLAKWFVDEVVTVTSDEICAAVKDIFEDTRAIAEPAGALSLAGLKKYVS TNAAGESGKGEKVAAILSGANVNFHSLRYVSERCELGEQKEAVLAVKVPERPGSFLRFCELLEKRVMTEFNYRFSSRDMA VVFAGIRLTKGHGELEQIINTLEDNGFEVQDLSGDETAKLHVRYMVGGHPPEPLEERLFSFEFPEHPGALLKFLTTLQSK WNISLFHYRNHGAAFGRVLAGFEVPEGDALPFQQFLTELGFVYQEETQSPAYQLFLNAGKGKKSLPL
Sequences:
>Translated_547_residues MLSLASSQTEQAEAQASQSKPGTSALEKSQLAQSYLQKILLSSVYDVAKVTPLSSLNKLSARLGCQVFLKREDMQPVHSF KLRGAYNRIAQLSQAECQRGVVCASAGNHAQGVAMSAASRGVDAVIVMPETTPDIKVDAVRRLGGNVVLHGQAFDQANGF AMEMAKLEGRVYIAPFDDEAVIAGQGTIAQEMLQQQRDLEVVFVPVGGGGLIAGIAAYYKAVMPQVKIVGVEPEDAACLK AAMEAGEPVTLAQVGLFADGVAVKRIGTEPFRLAKWFVDEVVTVTSDEICAAVKDIFEDTRAIAEPAGALSLAGLKKYVS TNAAGESGKGEKVAAILSGANVNFHSLRYVSERCELGEQKEAVLAVKVPERPGSFLRFCELLEKRVMTEFNYRFSSRDMA VVFAGIRLTKGHGELEQIINTLEDNGFEVQDLSGDETAKLHVRYMVGGHPPEPLEERLFSFEFPEHPGALLKFLTTLQSK WNISLFHYRNHGAAFGRVLAGFEVPEGDALPFQQFLTELGFVYQEETQSPAYQLFLNAGKGKKSLPL >Mature_547_residues MLSLASSQTEQAEAQASQSKPGTSALEKSQLAQSYLQKILLSSVYDVAKVTPLSSLNKLSARLGCQVFLKREDMQPVHSF KLRGAYNRIAQLSQAECQRGVVCASAGNHAQGVAMSAASRGVDAVIVMPETTPDIKVDAVRRLGGNVVLHGQAFDQANGF AMEMAKLEGRVYIAPFDDEAVIAGQGTIAQEMLQQQRDLEVVFVPVGGGGLIAGIAAYYKAVMPQVKIVGVEPEDAACLK AAMEAGEPVTLAQVGLFADGVAVKRIGTEPFRLAKWFVDEVVTVTSDEICAAVKDIFEDTRAIAEPAGALSLAGLKKYVS TNAAGESGKGEKVAAILSGANVNFHSLRYVSERCELGEQKEAVLAVKVPERPGSFLRFCELLEKRVMTEFNYRFSSRDMA VVFAGIRLTKGHGELEQIINTLEDNGFEVQDLSGDETAKLHVRYMVGGHPPEPLEERLFSFEFPEHPGALLKFLTTLQSK WNISLFHYRNHGAAFGRVLAGFEVPEGDALPFQQFLTELGFVYQEETQSPAYQLFLNAGKGKKSLPL
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=340, Percent_Identity=32.3529411764706, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI19923959, Length=308, Percent_Identity=30.8441558441558, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI33469958, Length=310, Percent_Identity=28.0645161290323, Blast_Score=96, Evalue=7e-20, Organism=Homo sapiens, GI295821202, Length=338, Percent_Identity=27.810650887574, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI295821200, Length=338, Percent_Identity=27.810650887574, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI4557415, Length=338, Percent_Identity=27.810650887574, Blast_Score=77, Evalue=5e-14, Organism=Escherichia coli, GI1790207, Length=521, Percent_Identity=58.3493282149712, Blast_Score=596, Evalue=1e-171, Organism=Escherichia coli, GI1789505, Length=306, Percent_Identity=37.9084967320261, Blast_Score=187, Evalue=2e-48, Organism=Escherichia coli, GI1789235, Length=257, Percent_Identity=25.2918287937743, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI2367138, Length=206, Percent_Identity=28.1553398058252, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71991565, Length=327, Percent_Identity=35.474006116208, Blast_Score=163, Evalue=2e-40, Organism=Caenorhabditis elegans, GI17537387, Length=328, Percent_Identity=31.0975609756098, Blast_Score=135, Evalue=5e-32, Organism=Caenorhabditis elegans, GI17508781, Length=255, Percent_Identity=29.4117647058824, Blast_Score=115, Evalue=6e-26, Organism=Saccharomyces cerevisiae, GI6320930, Length=513, Percent_Identity=50.682261208577, Blast_Score=474, Evalue=1e-134, Organism=Saccharomyces cerevisiae, GI6322631, Length=303, Percent_Identity=35.973597359736, Blast_Score=165, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6319788, Length=297, Percent_Identity=25.9259259259259, Blast_Score=91, Evalue=4e-19, Organism=Drosophila melanogaster, GI21355833, Length=319, Percent_Identity=33.8557993730408, Blast_Score=143, Evalue=4e-34, Organism=Drosophila melanogaster, GI24645328, Length=255, Percent_Identity=34.1176470588235, Blast_Score=103, Evalue=3e-22, Organism=Drosophila melanogaster, GI24643623, Length=207, Percent_Identity=28.9855072463768, Blast_Score=78, Evalue=2e-14, Organism=Drosophila melanogaster, GI20129101, Length=207, Percent_Identity=28.9855072463768, Blast_Score=78, Evalue=2e-14,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005787 - InterPro: IPR001721 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 59268; Mature: 59268
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSLASSQTEQAEAQASQSKPGTSALEKSQLAQSYLQKILLSSVYDVAKVTPLSSLNKLS CCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH ARLGCQVFLKREDMQPVHSFKLRGAYNRIAQLSQAECQRGVVCASAGNHAQGVAMSAASR HHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHCC GVDAVIVMPETTPDIKVDAVRRLGGNVVLHGQAFDQANGFAMEMAKLEGRVYIAPFDDEA CCCEEEEECCCCCCCHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHCCEEEEEECCCCE VIAGQGTIAQEMLQQQRDLEVVFVPVGGGGLIAGIAAYYKAVMPQVKIVGVEPEDAACLK EEECCCHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHH AAMEAGEPVTLAQVGLFADGVAVKRIGTEPFRLAKWFVDEVVTVTSDEICAAVKDIFEDT HHHHCCCCEEHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RAIAEPAGALSLAGLKKYVSTNAAGESGKGEKVAAILSGANVNFHSLRYVSERCELGEQK HHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCC EAVLAVKVPERPGSFLRFCELLEKRVMTEFNYRFSSRDMAVVFAGIRLTKGHGELEQIIN CEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCHHHHHHH TLEDNGFEVQDLSGDETAKLHVRYMVGGHPPEPLEERLFSFEFPEHPGALLKFLTTLQSK HHHCCCEEEEECCCCCEEEEEEEEEECCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCC WNISLFHYRNHGAAFGRVLAGFEVPEGDALPFQQFLTELGFVYQEETQSPAYQLFLNAGK CCEEEEEEECCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHCCCCCEEEEEEECCC GKKSLPL CCCCCCC >Mature Secondary Structure MLSLASSQTEQAEAQASQSKPGTSALEKSQLAQSYLQKILLSSVYDVAKVTPLSSLNKLS CCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH ARLGCQVFLKREDMQPVHSFKLRGAYNRIAQLSQAECQRGVVCASAGNHAQGVAMSAASR HHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHHCC GVDAVIVMPETTPDIKVDAVRRLGGNVVLHGQAFDQANGFAMEMAKLEGRVYIAPFDDEA CCCEEEEECCCCCCCHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHCCEEEEEECCCCE VIAGQGTIAQEMLQQQRDLEVVFVPVGGGGLIAGIAAYYKAVMPQVKIVGVEPEDAACLK EEECCCHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHH AAMEAGEPVTLAQVGLFADGVAVKRIGTEPFRLAKWFVDEVVTVTSDEICAAVKDIFEDT HHHHCCCCEEHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RAIAEPAGALSLAGLKKYVSTNAAGESGKGEKVAAILSGANVNFHSLRYVSERCELGEQK HHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCC EAVLAVKVPERPGSFLRFCELLEKRVMTEFNYRFSSRDMAVVFAGIRLTKGHGELEQIIN CEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEECCCCHHHHHHH TLEDNGFEVQDLSGDETAKLHVRYMVGGHPPEPLEERLFSFEFPEHPGALLKFLTTLQSK HHHCCCEEEEECCCCCEEEEEEEEEECCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHCC WNISLFHYRNHGAAFGRVLAGFEVPEGDALPFQQFLTELGFVYQEETQSPAYQLFLNAGK CCEEEEEEECCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHCCCCCEEEEEEECCC GKKSLPL CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11248100 [H]