Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is yqaE [C]
Identifier: 117918742
GI number: 117918742
Start: 318445
End: 318612
Strand: Direct
Name: yqaE [C]
Synonym: Shewana3_0285
Alternate gene names: 117918742
Gene position: 318445-318612 (Clockwise)
Preceding gene: 117918741
Following gene: 117918744
Centisome position: 6.4
GC content: 41.07
Gene sequence:
>168_bases ATGGATACCAACAAATTACTTTTAGTTATTATTGCGATTCTCTTGCCACCCGTTGCGGTATTTTTAAAGGCGGGCGCAGG CAAAGACCTATTAATTAACATTGTGCTGTGTTTATTTTTCTGGCTTCCCGGTTTATTACACGCCCTCTGGGTGGTCACTA AAGATTAG
Upstream 100 bases:
>100_bases TATTGAATGCGTGTGTAGCGGGATAAAATATTTGCAAATCCTGAGTCTTCCTGCGAAGTTAGCAGTGTGATGATTTTCCT TGTATAGGAGCAAGCTCGTT
Downstream 100 bases:
>100_bases TGGTTCTAGTAATCCAATAAAAAAGCGCAACCTAGGTTGCGCTTTTTATACGGTAAATTTAGCGTACTAATTAGAATGCC ACTGTATAGCCGATAGTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 55; Mature: 55
Protein sequence:
>55_residues MDTNKLLLVIIAILLPPVAVFLKAGAGKDLLINIVLCLFFWLPGLLHALWVVTKD
Sequences:
>Translated_55_residues MDTNKLLLVIIAILLPPVAVFLKAGAGKDLLINIVLCLFFWLPGLLHALWVVTKD >Mature_55_residues MDTNKLLLVIIAILLPPVAVFLKAGAGKDLLINIVLCLFFWLPGLLHALWVVTKD
Specific function: Unknown
COG id: COG0401
COG function: function code S; Uncharacterized homolog of Blt101
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6055; Mature: 6055
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: PS01309 UPF0057
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTNKLLLVIIAILLPPVAVFLKAGAGKDLLINIVLCLFFWLPGLLHALWVVTKD CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDTNKLLLVIIAILLPPVAVFLKAGAGKDLLINIVLCLFFWLPGLLHALWVVTKD CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA