Click here to switch to the map view.

The map label for this gene is nusG [H]

Identifier: 117918645

GI number: 117918645

Start: 226834

End: 227385

Strand: Direct

Name: nusG [H]

Synonym: Shewana3_0187

Alternate gene names: 117918645

Gene position: 226834-227385 (Clockwise)

Preceding gene: 117918644

Following gene: 117918646

Centisome position: 4.56

GC content: 45.83

Gene sequence:

>552_bases
ATGACTGAAGCTAAAGAAGCTAAAAAAAGATGGTATGTAGTGCAGGCATTCTCAGGCTATGAAGGCCGAGTTTGTAAGTC
ACTGATTGAATACATTAAAATGCACGGCATGGAACAGTACTTCGGCGAAGTATTAGTTCCGACTGAAGAAGTCATCGAAA
TGCGTGCAGGCCAGCGTCGTAAGAGCGAGCGTAAGTTTTTCCCTGGCTATGTGTTAGTCCAGATGGAAATGAACGATGAC
AGCTGGCATTTAGTCAAAAGCATCCCGCGTGTTTTAGGCTTTATTGGCGGAACTTCTGATCGTCCTGCCCCAATTTCAGA
TAGAGAAGCGGATGCAATTCTGCGTCGCTTACAAGAAACCACAGCTTCACCGACTCACCGTGTTATTTTCGAGCCGGGCG
AAGTGGTGCGTGTTTGTGATGGTCCATTTGCTGACTTTAACGGTACCGTTGAAGAAGTGGATTATGACAAGAGCCGCGTA
AAAGTGTCAGTAATGATCTTTGGTCGTTCTACACCGGTTGAGCTCGATTTTAATCAGGTCGAAAAAGGCTGA

Upstream 100 bases:

>100_bases
TGTCCTTGCTGCAACAGGTATTTTAGCCCTTGTTTTATGGGGTTTAGATGCAGTGTTAATGCACATTGTCAATTTCATCA
CTGGCGTATAGGCACCTCGA

Downstream 100 bases:

>100_bases
TTAAATTAAATACAAAAATCCGTTTGGCAACGGGTGCGGATTTCTATATAATCCGCCCCCGTTGTTTTCGGGGGAGCACG
TCGGCATGTCGCTGATGCGC

Product: transcription antitermination protein nusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MTEAKEAKKRWYVVQAFSGYEGRVCKSLIEYIKMHGMEQYFGEVLVPTEEVIEMRAGQRRKSERKFFPGYVLVQMEMNDD
SWHLVKSIPRVLGFIGGTSDRPAPISDREADAILRRLQETTASPTHRVIFEPGEVVRVCDGPFADFNGTVEEVDYDKSRV
KVSVMIFGRSTPVELDFNQVEKG

Sequences:

>Translated_183_residues
MTEAKEAKKRWYVVQAFSGYEGRVCKSLIEYIKMHGMEQYFGEVLVPTEEVIEMRAGQRRKSERKFFPGYVLVQMEMNDD
SWHLVKSIPRVLGFIGGTSDRPAPISDREADAILRRLQETTASPTHRVIFEPGEVVRVCDGPFADFNGTVEEVDYDKSRV
KVSVMIFGRSTPVELDFNQVEKG
>Mature_182_residues
TEAKEAKKRWYVVQAFSGYEGRVCKSLIEYIKMHGMEQYFGEVLVPTEEVIEMRAGQRRKSERKFFPGYVLVQMEMNDDS
WHLVKSIPRVLGFIGGTSDRPAPISDREADAILRRLQETTASPTHRVIFEPGEVVRVCDGPFADFNGTVEEVDYDKSRVK
VSVMIFGRSTPVELDFNQVEKG

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=183, Percent_Identity=75.4098360655738, Blast_Score=289, Evalue=9e-80,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 20930; Mature: 20799

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEAKEAKKRWYVVQAFSGYEGRVCKSLIEYIKMHGMEQYFGEVLVPTEEVIEMRAGQRR
CCCHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHCCHH
KSERKFFPGYVLVQMEMNDDSWHLVKSIPRVLGFIGGTSDRPAPISDREADAILRRLQET
HHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
TASPTHRVIFEPGEVVRVCDGPFADFNGTVEEVDYDKSRVKVSVMIFGRSTPVELDFNQV
CCCCCEEEEECCCCEEEECCCCCCCCCCCHHHCCCCCCCEEEEEEEEECCCCEEECHHHC
EKG
CCC
>Mature Secondary Structure 
TEAKEAKKRWYVVQAFSGYEGRVCKSLIEYIKMHGMEQYFGEVLVPTEEVIEMRAGQRR
CCHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHCCHH
KSERKFFPGYVLVQMEMNDDSWHLVKSIPRVLGFIGGTSDRPAPISDREADAILRRLQET
HHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
TASPTHRVIFEPGEVVRVCDGPFADFNGTVEEVDYDKSRVKVSVMIFGRSTPVELDFNQV
CCCCCEEEEECCCCEEEECCCCCCCCCCCHHHCCCCCCCEEEEEEEEECCCCEEECHHHC
EKG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]