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The map label for this gene is 117918625

Identifier: 117918625

GI number: 117918625

Start: 190875

End: 191510

Strand: Direct

Name: 117918625

Synonym: Shewana3_0167

Alternate gene names: NA

Gene position: 190875-191510 (Clockwise)

Preceding gene: 117918624

Following gene: 117918626

Centisome position: 3.84

GC content: 52.04

Gene sequence:

>636_bases
ATGGCAGATCCATTTATTGGAGAAATCCGCATGTTCGCTGGTACTTTCGCTCCGCGTGGCTGGGCGCTTTGCAATGGACA
GTTACTGGCCATTTCCACCTACACCGCGCTCTTCTCTCTTCTGGGTACAAACTATGGTGGCAATGGCACCACAACCTTTG
GATTGCCTAATCTGCAAAGTCGTACTCCTGTGGGTACTGGAACTGGGGGAGGTTTGACAACAGTTGTTCTCGGGCAGAGC
TCGGGTGCTGAGAACATCAATCTCACAACCAATCAGCTACCTATTCATACACCAACAGCTACTTTCACTGGCAATGCAAG
TAGTGTGGCAGCAACTGTTGATGTTGCTACCACTACGGCCACTGCAATGGTTCCTCCGGCAACGGGCGCAACTACCTACC
TCTCTGCTACGACAGCTAAGGCGGGGCCTGCAAATGTTGCGTTTAATGGGTTGTTTACTGGTACGGCGCCAGACTCTACA
AAGGCCAGCCTCGGTGGAGTGCAGGGTAGCGTAACACCTACAGGCACAGTAACCGTTGGTCCTGTCGGCGGGGGGCTGCC
TGTCGGAATTCGCAATCCCTATCTGGGAATGAATTTTATTATCGCGTTGGAGGGTATTTATCCGTCGCGTAATTAA

Upstream 100 bases:

>100_bases
TGTAATCAGCAGAAGGAACTCGCTGTCGATTAATTGTCGTGAGTAATTAAACCATTAAAAGACGTTACATAGACAAAATC
GTTATTTAAGGAGAAATACA

Downstream 100 bases:

>100_bases
CGGCGGATAATTGCTATTAAAATATCTTAGTAATCTAGAGAGGAAAACCTTCTGGAGTACTAGATTTTAGCTTCTTGAAT
TAAATCAAATTCCTCGTGCA

Product: phage tail collar domain-containing protein

Products: NA

Alternate protein names: Phage Tail Collar; Tail Collar Domain-Containing Protein; Phage Tail Collar Domain-Containing Protein; Microcystin Dependent Protein; Phage Tail Collar Domain Protein; Microcystin Dependent Protein MdpB; Phage Tail Collar Domain Family; Microcystin-Dependent Protein; Microcystin Dependent; Phenylacrylic Acid Decarboxylase

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MADPFIGEIRMFAGTFAPRGWALCNGQLLAISTYTALFSLLGTNYGGNGTTTFGLPNLQSRTPVGTGTGGGLTTVVLGQS
SGAENINLTTNQLPIHTPTATFTGNASSVAATVDVATTTATAMVPPATGATTYLSATTAKAGPANVAFNGLFTGTAPDST
KASLGGVQGSVTPTGTVTVGPVGGGLPVGIRNPYLGMNFIIALEGIYPSRN

Sequences:

>Translated_211_residues
MADPFIGEIRMFAGTFAPRGWALCNGQLLAISTYTALFSLLGTNYGGNGTTTFGLPNLQSRTPVGTGTGGGLTTVVLGQS
SGAENINLTTNQLPIHTPTATFTGNASSVAATVDVATTTATAMVPPATGATTYLSATTAKAGPANVAFNGLFTGTAPDST
KASLGGVQGSVTPTGTVTVGPVGGGLPVGIRNPYLGMNFIIALEGIYPSRN
>Mature_210_residues
ADPFIGEIRMFAGTFAPRGWALCNGQLLAISTYTALFSLLGTNYGGNGTTTFGLPNLQSRTPVGTGTGGGLTTVVLGQSS
GAENINLTTNQLPIHTPTATFTGNASSVAATVDVATTTATAMVPPATGATTYLSATTAKAGPANVAFNGLFTGTAPDSTK
ASLGGVQGSVTPTGTVTVGPVGGGLPVGIRNPYLGMNFIIALEGIYPSRN

Specific function: Unknown

COG id: COG4675

COG function: function code S; Microcystin-dependent protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21019; Mature: 20888

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADPFIGEIRMFAGTFAPRGWALCNGQLLAISTYTALFSLLGTNYGGNGTTTFGLPNLQS
CCCCCHHHHEEEHHCCCCCCEEEECCEEEEEEHHHHHHHHHCCCCCCCCEEEECCCCCCC
RTPVGTGTGGGLTTVVLGQSSGAENINLTTNQLPIHTPTATFTGNASSVAATVDVATTTA
CCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCEEECCCEEEECCCCCEEEEEEEEECEE
TAMVPPATGATTYLSATTAKAGPANVAFNGLFTGTAPDSTKASLGGVQGSVTPTGTVTVG
EEEECCCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCHHCCCCCCCCCCCCEEEEC
PVGGGLPVGIRNPYLGMNFIIALEGIYPSRN
CCCCCCCCCCCCCCCCEEEEEEEECCCCCCC
>Mature Secondary Structure 
ADPFIGEIRMFAGTFAPRGWALCNGQLLAISTYTALFSLLGTNYGGNGTTTFGLPNLQS
CCCCHHHHEEEHHCCCCCCEEEECCEEEEEEHHHHHHHHHCCCCCCCCEEEECCCCCCC
RTPVGTGTGGGLTTVVLGQSSGAENINLTTNQLPIHTPTATFTGNASSVAATVDVATTTA
CCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCEEECCCEEEECCCCCEEEEEEEEECEE
TAMVPPATGATTYLSATTAKAGPANVAFNGLFTGTAPDSTKASLGGVQGSVTPTGTVTVG
EEEECCCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCCCCHHCCCCCCCCCCCCEEEEC
PVGGGLPVGIRNPYLGMNFIIALEGIYPSRN
CCCCCCCCCCCCCCCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA