Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_008577 |
Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is ftnA [H]
Identifier: 117918590
GI number: 117918590
Start: 147853
End: 148389
Strand: Direct
Name: ftnA [H]
Synonym: Shewana3_0132
Alternate gene names: 117918590
Gene position: 147853-148389 (Clockwise)
Preceding gene: 117918585
Following gene: 117918593
Centisome position: 2.97
GC content: 45.81
Gene sequence:
>537_bases ATGCTGTCTGCAACCATGATCGAAAAGTTGAATGAACAAATTAATATGGAGTTCTTCTCCTCTAATTTATACCTGCAAAT GAGTGCATGGTGTGAAGATCAAGGCTTTGAAGGCGCAGCAAAATTTATGCGCGAACATGCGGATGAAGAGATGGGCCACA TGCGTCGTTTGTTCACTTATGTGAGCGAAACTGGCGGCTTGCCGCTACTGGGTGCAATTGAAGCGCCGCAGTCGCAGTTT GATTCGCTGCTGGCGTTATTCGAGCTGACCTATGAACACGAGCAACTGATCACTAGTAAGATCAATGCCTTGGCTCATGC TGCCTTTTCAAACCAAGATTATTCGACCTTCAATTTCCTGCAATGGTATGTGGCCGAGCAGCACGAAGAAGAAAAGCTGT TTAAGTCGATCGTCGATAAGATCCGTTTAGTGGGCGAAGATGGTAAAGCACTGTTCTTTATCGATAAAGATTTAGCTAAG TTGGCATCAAAAGGCGGTGAGAGCATTATGAACCCCCAAAGCCAGCCACAGGCCTAA
Upstream 100 bases:
>100_bases ACTTAGCTCAATAAACAAAGGTAAATTTTGTTGCTTTTGGCGACGCCCTTCATGACAATGTGTGCCAAGATTTCAGTTCG AATGCCCAAGAGGATTAACT
Downstream 100 bases:
>100_bases GCGCCATTGTGATGATAAAAAAGCAGCCTAGGCTGCTTTTTTGTTGGCGATCATTCAGCTTAATGAACCTTTATATCAAC TGTTTACGCATTTCTCTCGC
Product: Ferritin, Dps family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MLSATMIEKLNEQINMEFFSSNLYLQMSAWCEDQGFEGAAKFMREHADEEMGHMRRLFTYVSETGGLPLLGAIEAPQSQF DSLLALFELTYEHEQLITSKINALAHAAFSNQDYSTFNFLQWYVAEQHEEEKLFKSIVDKIRLVGEDGKALFFIDKDLAK LASKGGESIMNPQSQPQA
Sequences:
>Translated_178_residues MLSATMIEKLNEQINMEFFSSNLYLQMSAWCEDQGFEGAAKFMREHADEEMGHMRRLFTYVSETGGLPLLGAIEAPQSQF DSLLALFELTYEHEQLITSKINALAHAAFSNQDYSTFNFLQWYVAEQHEEEKLFKSIVDKIRLVGEDGKALFFIDKDLAK LASKGGESIMNPQSQPQA >Mature_178_residues MLSATMIEKLNEQINMEFFSSNLYLQMSAWCEDQGFEGAAKFMREHADEEMGHMRRLFTYVSETGGLPLLGAIEAPQSQF DSLLALFELTYEHEQLITSKINALAHAAFSNQDYSTFNFLQWYVAEQHEEEKLFKSIVDKIRLVGEDGKALFFIDKDLAK LASKGGESIMNPQSQPQA
Specific function: Iron-storage protein [H]
COG id: COG1528
COG function: function code P; Ferritin-like protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1788216, Length=165, Percent_Identity=62.4242424242424, Blast_Score=224, Evalue=3e-60, Organism=Escherichia coli, GI1788212, Length=142, Percent_Identity=38.0281690140845, Blast_Score=107, Evalue=6e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 - InterPro: IPR001519 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: =1.16.3.1 [H]
Molecular weight: Translated: 20246; Mature: 20246
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSATMIEKLNEQINMEFFSSNLYLQMSAWCEDQGFEGAAKFMREHADEEMGHMRRLFTY CCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VSETGGLPLLGAIEAPQSQFDSLLALFELTYEHEQLITSKINALAHAAFSNQDYSTFNFL HHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH QWYVAEQHEEEKLFKSIVDKIRLVGEDGKALFFIDKDLAKLASKGGESIMNPQSQPQA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHCCCCHHCCCCCCCCC >Mature Secondary Structure MLSATMIEKLNEQINMEFFSSNLYLQMSAWCEDQGFEGAAKFMREHADEEMGHMRRLFTY CCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VSETGGLPLLGAIEAPQSQFDSLLALFELTYEHEQLITSKINALAHAAFSNQDYSTFNFL HHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH QWYVAEQHEEEKLFKSIVDKIRLVGEDGKALFFIDKDLAKLASKGGESIMNPQSQPQA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHCCCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]