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The map label for this gene is 117918542

Identifier: 117918542

GI number: 117918542

Start: 97540

End: 98088

Strand: Direct

Name: 117918542

Synonym: Shewana3_0083

Alternate gene names: NA

Gene position: 97540-98088 (Clockwise)

Preceding gene: 117918541

Following gene: 117918545

Centisome position: 1.96

GC content: 50.82

Gene sequence:

>549_bases
ATGAGATTTTACTTCACCCGAATGCGTTCTAAGGACATCTGTCCGCCACGACAACCCCTGAAAAAGATCGTTTGGTCATG
GGTAGGAGCCTTTTGCGGCATTTACTTAGTCGCCAGTCTCGCCAGTTATATGAGCGATAATCTGCTCGGCACTATGTTTG
TGATTGGCTCATTTGGGGCGTCGGCGGTATTAGTCTATGGCGCGCCGCTGGCAGAGTTTTCTCAGCCACGTAACTTGATT
GGCGGCAGTGTGTTATCGGCACTGATTGGTGTGGCTGTTTATCAAGTGTTTGCCGATTATATGGTGCTTGCGAGTGCGTT
AGCCGTATCACTAGCCATCGCATTGATGTATTTAACTCGCACGCTGCATCCACCGGGCGGCGCTACGGCATTAATTGCCG
TGATAGGCGGTGAGAACGTGCATCAACTCGGATTTCTCTATGCGTTGATGCCGGTCTTTCTCGGCTCACTACTGCTGTTG
CTGGTGGCGCTGGTCGTGAATAATCTCTCCACCGATCCCAAACGCCACTATCCAGTCTATTGGATTTAG

Upstream 100 bases:

>100_bases
CCGCACAATTGCAATTGCGCGGTGAAAACGTTAACGTGGCGGCCGCAAACGTGATGCGGATCACTTATCCGCGCCTTTAT
TCCTCCCGGCCGGATTTAGC

Downstream 100 bases:

>100_bases
CACACCTGTTGCGAAGCCTGTTATTTCAAAAACTTCTGCACATACCAACAGCTGGCTGCTATCTCAAAATCTTGGGCTTT
GGCCCACTTTAGGCCATGGC

Product: HPP family protein

Products: NA

Alternate protein names: CBS Domain-Containing Protein; HPP Family Protein+B; CBS Domain Containing Membrane Protein; CBS Domain-Containing Membrane Protein; HPP Domain-Containing Protein; HPP Family Membrane Protein; CBS-Domain-Containing Membrane Protein; Cbs Domain Containing Membrane Protein; HPP Family; HPP Domain Protein

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MRFYFTRMRSKDICPPRQPLKKIVWSWVGAFCGIYLVASLASYMSDNLLGTMFVIGSFGASAVLVYGAPLAEFSQPRNLI
GGSVLSALIGVAVYQVFADYMVLASALAVSLAIALMYLTRTLHPPGGATALIAVIGGENVHQLGFLYALMPVFLGSLLLL
LVALVVNNLSTDPKRHYPVYWI

Sequences:

>Translated_182_residues
MRFYFTRMRSKDICPPRQPLKKIVWSWVGAFCGIYLVASLASYMSDNLLGTMFVIGSFGASAVLVYGAPLAEFSQPRNLI
GGSVLSALIGVAVYQVFADYMVLASALAVSLAIALMYLTRTLHPPGGATALIAVIGGENVHQLGFLYALMPVFLGSLLLL
LVALVVNNLSTDPKRHYPVYWI
>Mature_182_residues
MRFYFTRMRSKDICPPRQPLKKIVWSWVGAFCGIYLVASLASYMSDNLLGTMFVIGSFGASAVLVYGAPLAEFSQPRNLI
GGSVLSALIGVAVYQVFADYMVLASALAVSLAIALMYLTRTLHPPGGATALIAVIGGENVHQLGFLYALMPVFLGSLLLL
LVALVVNNLSTDPKRHYPVYWI

Specific function: Unknown

COG id: COG3448

COG function: function code T; CBS-domain-containing membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19735; Mature: 19735

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFYFTRMRSKDICPPRQPLKKIVWSWVGAFCGIYLVASLASYMSDNLLGTMFVIGSFGA
CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
SAVLVYGAPLAEFSQPRNLIGGSVLSALIGVAVYQVFADYMVLASALAVSLAIALMYLTR
HHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLHPPGGATALIAVIGGENVHQLGFLYALMPVFLGSLLLLLVALVVNNLSTDPKRHYPVY
HCCCCCCHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
WI
CC
>Mature Secondary Structure
MRFYFTRMRSKDICPPRQPLKKIVWSWVGAFCGIYLVASLASYMSDNLLGTMFVIGSFGA
CCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
SAVLVYGAPLAEFSQPRNLIGGSVLSALIGVAVYQVFADYMVLASALAVSLAIALMYLTR
HHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLHPPGGATALIAVIGGENVHQLGFLYALMPVFLGSLLLLLVALVVNNLSTDPKRHYPVY
HCCCCCCHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
WI
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA