Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117918540
Identifier: 117918540
GI number: 117918540
Start: 94414
End: 96903
Strand: Direct
Name: 117918540
Synonym: Shewana3_0081
Alternate gene names: NA
Gene position: 94414-96903 (Clockwise)
Preceding gene: 117918539
Following gene: 117918541
Centisome position: 1.9
GC content: 49.28
Gene sequence:
>2490_bases ATGGAACTTTCGATTCGTCGTTTATGCGCCGCGGCTGGTGCGGTGTTGCTCTCTTCTTTTGCGGTTATTCCTGCTGCACT TGCGGCGGAATATGACAAAATGGTTCACGGTCCCGTGGATCTTCCCAATGGCCAATGGCTCAATTTTTATCAAAAAGATC AACAGGTATGGGGCGAAATGCTCTACGGCGATGCGCCTGGTGTACGCATTGACGATTACGGCCGCGTCGAAATCGTGGCG GTGTTTTACTATGACTTCGACAAGGGCGGCACTAAAGAGGTGATCGTCATGCTCAAGGATGCCGATGGCCAGCATCTACG GGGTTATGGTTTTGAGGGCGAGGAGTTGACTAAACTGCCGCGCCTGCAAGCCGTGCTCGATGAAGTCGCACCCACCATTA GCACCTTTACCGTTGGCGGCGTTCGCAAAGTTTTAAGCCAGTTACCACCGCAGCAGTACCGTATGACCTATGAGGCTGAG GGTGTCCAAGATCCTGACATTAAAGCGATTCTTGATGGTACCTCTAAACTCAAACCGACCTTAATTGGTTATCGCAACTC TGAAGGCACGGCAACGGATGTAAAAACCGCAGTGGAATACAAGCTGCGCTATCCCCTGACTCGCACTGATAAGGATGCCG AGGGGCGTGAACGAAAATACAGTCTGGTGGCAACCTTTGATCGCAGCGCCTACGTCGAAGAAGATAGCAGCTTTATGCTG GTGGCCATTGGTTACGAGGCCGACGACATCGATTGGCTTAAAAATGGCAGCGAAAAAATCCCGCGAACTGGGCCTTTTTA CGAATTCATGAGTATGGGCAGTACTTGGGCTGGCGTTGCCAGTGAAGCCCATTATGTGCAGGGTGAGCTTGATGGTCACT TTGCCGCCTACGATGCCCGCAATGGCAGTGTGATGTATGCCGGTGACTATAAGCTGGGTAAGCAAGTGGGTAAGTGGATT GAAGCCGACGGCCGTGAAACCTATTGGGAAGGCGAGTACCTCGACGGCCAAAAGCAGGGTAAATGGGTGTTGCAGTCCAT GATGGATGACGCCGATAACTACGGCTTTATTCACTACAACAAGGGCGTGCCCGATGGCCCGAGTGAAGTCTATACCCCAG ATTACGATTCCAGTACCGAAGGCGCGAAGAAGTTGTCCGAAAAGGGCATTTATCTCAATGGCGTAAAAGATGGCGAGTGG CTTGAGTCCGATGGCAGCAAAGGCCAATACCAAAAGGGCGTGAAACAAGGCGCTTGGGTGGAAAAGGCCACTCAAGGGGA CTATCGGTTTCAAACCGGTGAAGGCCGCTACCTCGATGGTAAACGTTCAGGTACTTGGGTCTATATTCGAACGCCCGATG AGAACGATGCTTTTACCACTAAGCAATCGGTGACTTATCTCTACAAGACCGAAGTCAACTATGAGAATGGCCTACGCCAA GGTGAGGCTAAGCTATTCAATAAAGATAATTTTATGTTCGCCCTTAAACATTACGAAAAAGGCCGCCTTCACGGAGAAAG TCTATGGTACTCAGCGCCAAATATCGTCAGCAATGTTGCCAATTATCGTCAAGGTGAGTTGGATGGCCCACAAATGTGGC TCGAGCCTAACGGCGATCTGAATGAGTTGAGTCAGTATAAGTTTAATGACGCCGTAACACTTAAACCCTCGCAGGATGAA TGCATGATGCGAAAAGAACCCTACGCAGGCGATTGTGAGGGGGTGTTAAATTCAAAAAATGCTGAAACCACTTCAATTAA GGATGGTGAGCAACGTGTATATCGTGGCGGCCGCCTATCCGAATTAAGCTATTACACTAATGGGTCAGTCGATAAAGAAT ATCGATTCGATTCTAACGGTCGCTTAATGTCCCTGCAGACTTATAAAGCGGGTCAGGAATACGGCCCAAGCATCCGCTAT TCCACCGACGGCGGCTATTCGCTCGTGCAATATGGTCATCTTATCAATAACCGTCTTTCTGGACCCCATTACACTTTCTA CCCGAACGGCCAGTTAAAGAGCTTGTGGAACTATTGCCAGCAAGAAGGCGAAACCTGGAACGGTGAACCCTATTTCTGGG ATAACGCCATTGCGCGCTGTGGTATCCAGCGGGAGTATTTTGATAATGGTGCCGTGAGTTGTATCGAGGATCTCGACAGC AATTATGCCGTGGATAAAGTCTGTTACGACCAAAATGGTAAGTTAGCCAGCGAAATGCTGCGTATCGATGAGCAACATGT GGTGCATAAGCGCTATATGAACGGGGTTATCTATCAAGAGGAACCCGGATTCTCGGATTTTTCCCATGTGACCAAGGGGC GCAAAATCTATCACTTAGAAAACCCTAAAAGCCATGGTGTGTTTAAGTCCTACGACAGCAGTGGCAAGCTCAAATACGAA AAAATATTCGATATGGGTAAGGCTGGCTGTATGAAAAAGTACGATGCCAATGGCAAGCAAACCCCAGAGACCGCGAGTTG CCAGTTCTAG
Upstream 100 bases:
>100_bases TTTTGTGTCAGCCACTTCCTGAAGCATCAGACTTCGCTTAAAATTCGCCCCGCTTACTGGTGCGCACGAGGCGCAAGGTG TCGGTGTTAAGGATAGTTAA
Downstream 100 bases:
>100_bases CATCGCGCTTCTTATTTCTGTTAGGCTTGGTGGGGATAAACGGGGCAAGCACCTCGTTTATCCCATTCACAGCATAAAAG TATAAGAACAACAAAAGGGA
Product: MORN repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 829; Mature: 829
Protein sequence:
>829_residues MELSIRRLCAAAGAVLLSSFAVIPAALAAEYDKMVHGPVDLPNGQWLNFYQKDQQVWGEMLYGDAPGVRIDDYGRVEIVA VFYYDFDKGGTKEVIVMLKDADGQHLRGYGFEGEELTKLPRLQAVLDEVAPTISTFTVGGVRKVLSQLPPQQYRMTYEAE GVQDPDIKAILDGTSKLKPTLIGYRNSEGTATDVKTAVEYKLRYPLTRTDKDAEGRERKYSLVATFDRSAYVEEDSSFML VAIGYEADDIDWLKNGSEKIPRTGPFYEFMSMGSTWAGVASEAHYVQGELDGHFAAYDARNGSVMYAGDYKLGKQVGKWI EADGRETYWEGEYLDGQKQGKWVLQSMMDDADNYGFIHYNKGVPDGPSEVYTPDYDSSTEGAKKLSEKGIYLNGVKDGEW LESDGSKGQYQKGVKQGAWVEKATQGDYRFQTGEGRYLDGKRSGTWVYIRTPDENDAFTTKQSVTYLYKTEVNYENGLRQ GEAKLFNKDNFMFALKHYEKGRLHGESLWYSAPNIVSNVANYRQGELDGPQMWLEPNGDLNELSQYKFNDAVTLKPSQDE CMMRKEPYAGDCEGVLNSKNAETTSIKDGEQRVYRGGRLSELSYYTNGSVDKEYRFDSNGRLMSLQTYKAGQEYGPSIRY STDGGYSLVQYGHLINNRLSGPHYTFYPNGQLKSLWNYCQQEGETWNGEPYFWDNAIARCGIQREYFDNGAVSCIEDLDS NYAVDKVCYDQNGKLASEMLRIDEQHVVHKRYMNGVIYQEEPGFSDFSHVTKGRKIYHLENPKSHGVFKSYDSSGKLKYE KIFDMGKAGCMKKYDANGKQTPETASCQF
Sequences:
>Translated_829_residues MELSIRRLCAAAGAVLLSSFAVIPAALAAEYDKMVHGPVDLPNGQWLNFYQKDQQVWGEMLYGDAPGVRIDDYGRVEIVA VFYYDFDKGGTKEVIVMLKDADGQHLRGYGFEGEELTKLPRLQAVLDEVAPTISTFTVGGVRKVLSQLPPQQYRMTYEAE GVQDPDIKAILDGTSKLKPTLIGYRNSEGTATDVKTAVEYKLRYPLTRTDKDAEGRERKYSLVATFDRSAYVEEDSSFML VAIGYEADDIDWLKNGSEKIPRTGPFYEFMSMGSTWAGVASEAHYVQGELDGHFAAYDARNGSVMYAGDYKLGKQVGKWI EADGRETYWEGEYLDGQKQGKWVLQSMMDDADNYGFIHYNKGVPDGPSEVYTPDYDSSTEGAKKLSEKGIYLNGVKDGEW LESDGSKGQYQKGVKQGAWVEKATQGDYRFQTGEGRYLDGKRSGTWVYIRTPDENDAFTTKQSVTYLYKTEVNYENGLRQ GEAKLFNKDNFMFALKHYEKGRLHGESLWYSAPNIVSNVANYRQGELDGPQMWLEPNGDLNELSQYKFNDAVTLKPSQDE CMMRKEPYAGDCEGVLNSKNAETTSIKDGEQRVYRGGRLSELSYYTNGSVDKEYRFDSNGRLMSLQTYKAGQEYGPSIRY STDGGYSLVQYGHLINNRLSGPHYTFYPNGQLKSLWNYCQQEGETWNGEPYFWDNAIARCGIQREYFDNGAVSCIEDLDS NYAVDKVCYDQNGKLASEMLRIDEQHVVHKRYMNGVIYQEEPGFSDFSHVTKGRKIYHLENPKSHGVFKSYDSSGKLKYE KIFDMGKAGCMKKYDANGKQTPETASCQF >Mature_829_residues MELSIRRLCAAAGAVLLSSFAVIPAALAAEYDKMVHGPVDLPNGQWLNFYQKDQQVWGEMLYGDAPGVRIDDYGRVEIVA VFYYDFDKGGTKEVIVMLKDADGQHLRGYGFEGEELTKLPRLQAVLDEVAPTISTFTVGGVRKVLSQLPPQQYRMTYEAE GVQDPDIKAILDGTSKLKPTLIGYRNSEGTATDVKTAVEYKLRYPLTRTDKDAEGRERKYSLVATFDRSAYVEEDSSFML VAIGYEADDIDWLKNGSEKIPRTGPFYEFMSMGSTWAGVASEAHYVQGELDGHFAAYDARNGSVMYAGDYKLGKQVGKWI EADGRETYWEGEYLDGQKQGKWVLQSMMDDADNYGFIHYNKGVPDGPSEVYTPDYDSSTEGAKKLSEKGIYLNGVKDGEW LESDGSKGQYQKGVKQGAWVEKATQGDYRFQTGEGRYLDGKRSGTWVYIRTPDENDAFTTKQSVTYLYKTEVNYENGLRQ GEAKLFNKDNFMFALKHYEKGRLHGESLWYSAPNIVSNVANYRQGELDGPQMWLEPNGDLNELSQYKFNDAVTLKPSQDE CMMRKEPYAGDCEGVLNSKNAETTSIKDGEQRVYRGGRLSELSYYTNGSVDKEYRFDSNGRLMSLQTYKAGQEYGPSIRY STDGGYSLVQYGHLINNRLSGPHYTFYPNGQLKSLWNYCQQEGETWNGEPYFWDNAIARCGIQREYFDNGAVSCIEDLDS NYAVDKVCYDQNGKLASEMLRIDEQHVVHKRYMNGVIYQEEPGFSDFSHVTKGRKIYHLENPKSHGVFKSYDSSGKLKYE KIFDMGKAGCMKKYDANGKQTPETASCQF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 93761; Mature: 93761
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELSIRRLCAAAGAVLLSSFAVIPAALAAEYDKMVHGPVDLPNGQWLNFYQKDQQVWGEM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHH LYGDAPGVRIDDYGRVEIVAVFYYDFDKGGTKEVIVMLKDADGQHLRGYGFEGEELTKLP HCCCCCCCEECCCCCEEEEEEEEEECCCCCCEEEEEEEECCCCCEEECCCCCCHHHHHHH RLQAVLDEVAPTISTFTVGGVRKVLSQLPPQQYRMTYEAEGVQDPDIKAILDGTSKLKPT HHHHHHHHHHHHHHHEEHHHHHHHHHHCCCHHHEEEEECCCCCCCCHHEEECCCCCCCCE LIGYRNSEGTATDVKTAVEYKLRYPLTRTDKDAEGRERKYSLVATFDRSAYVEEDSSFML EEEEECCCCCHHHHHHHEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCEEEECCCCEEE VAIGYEADDIDWLKNGSEKIPRTGPFYEFMSMGSTWAGVASEAHYVQGELDGHFAAYDAR EEECCCCCCHHHHHCCCCCCCCCCCHHHHHHCCCCHHHHCCCCEEEECCCCCEEEEEECC NGSVMYAGDYKLGKQVGKWIEADGRETYWEGEYLDGQKQGKWVLQSMMDDADNYGFIHYN CCCEEEECCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEC KGVPDGPSEVYTPDYDSSTEGAKKLSEKGIYLNGVKDGEWLESDGSKGQYQKGVKQGAWV CCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHCCCCH EKATQGDYRFQTGEGRYLDGKRSGTWVYIRTPDENDAFTTKQSVTYLYKTEVNYENGLRQ HHCCCCCEEEECCCCCEECCCCCCEEEEEECCCCCCCEECCCCEEEEEEEECCHHHCCCC GEAKLFNKDNFMFALKHYEKGRLHGESLWYSAPNIVSNVANYRQGELDGPQMWLEPNGDL CCHHEECCCCEEEEEEECCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCCEEEECCCCCH NELSQYKFNDAVTLKPSQDECMMRKEPYAGDCEGVLNSKNAETTSIKDGEQRVYRGGRLS HHHHHHCCCCEEEECCCHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHCCCCEE ELSYYTNGSVDKEYRFDSNGRLMSLQTYKAGQEYGPSIRYSTDGGYSLVQYGHLINNRLS EEEEECCCCCCCCEEECCCCCEEEEEEECCCHHHCCCEEEECCCCHHHHHHHHHHHCCCC GPHYTFYPNGQLKSLWNYCQQEGETWNGEPYFWDNAIARCGIQREYFDNGAVSCIEDLDS CCEEEECCCCHHHHHHHHHHHCCCCCCCCCEEECCHHHHCCCCHHHHCCCHHHHHHHCCC NYAVDKVCYDQNGKLASEMLRIDEQHVVHKRYMNGVIYQEEPGFSDFSHVTKGRKIYHLE CCEEEHEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHCCCEEEEEC NPKSHGVFKSYDSSGKLKYEKIFDMGKAGCMKKYDANGKQTPETASCQF CCCCCCCEECCCCCCCEEHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MELSIRRLCAAAGAVLLSSFAVIPAALAAEYDKMVHGPVDLPNGQWLNFYQKDQQVWGEM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHH LYGDAPGVRIDDYGRVEIVAVFYYDFDKGGTKEVIVMLKDADGQHLRGYGFEGEELTKLP HCCCCCCCEECCCCCEEEEEEEEEECCCCCCEEEEEEEECCCCCEEECCCCCCHHHHHHH RLQAVLDEVAPTISTFTVGGVRKVLSQLPPQQYRMTYEAEGVQDPDIKAILDGTSKLKPT HHHHHHHHHHHHHHHEEHHHHHHHHHHCCCHHHEEEEECCCCCCCCHHEEECCCCCCCCE LIGYRNSEGTATDVKTAVEYKLRYPLTRTDKDAEGRERKYSLVATFDRSAYVEEDSSFML EEEEECCCCCHHHHHHHEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCEEEECCCCEEE VAIGYEADDIDWLKNGSEKIPRTGPFYEFMSMGSTWAGVASEAHYVQGELDGHFAAYDAR EEECCCCCCHHHHHCCCCCCCCCCCHHHHHHCCCCHHHHCCCCEEEECCCCCEEEEEECC NGSVMYAGDYKLGKQVGKWIEADGRETYWEGEYLDGQKQGKWVLQSMMDDADNYGFIHYN CCCEEEECCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEC KGVPDGPSEVYTPDYDSSTEGAKKLSEKGIYLNGVKDGEWLESDGSKGQYQKGVKQGAWV CCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHCCCCH EKATQGDYRFQTGEGRYLDGKRSGTWVYIRTPDENDAFTTKQSVTYLYKTEVNYENGLRQ HHCCCCCEEEECCCCCEECCCCCCEEEEEECCCCCCCEECCCCEEEEEEEECCHHHCCCC GEAKLFNKDNFMFALKHYEKGRLHGESLWYSAPNIVSNVANYRQGELDGPQMWLEPNGDL CCHHEECCCCEEEEEEECCCCCCCCCCEEECCCHHHHHHHHHCCCCCCCCEEEECCCCCH NELSQYKFNDAVTLKPSQDECMMRKEPYAGDCEGVLNSKNAETTSIKDGEQRVYRGGRLS HHHHHHCCCCEEEECCCHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHCCCCEE ELSYYTNGSVDKEYRFDSNGRLMSLQTYKAGQEYGPSIRYSTDGGYSLVQYGHLINNRLS EEEEECCCCCCCCEEECCCCCEEEEEEECCCHHHCCCEEEECCCCHHHHHHHHHHHCCCC GPHYTFYPNGQLKSLWNYCQQEGETWNGEPYFWDNAIARCGIQREYFDNGAVSCIEDLDS CCEEEECCCCHHHHHHHHHHHCCCCCCCCCEEECCHHHHCCCCHHHHCCCHHHHHHHCCC NYAVDKVCYDQNGKLASEMLRIDEQHVVHKRYMNGVIYQEEPGFSDFSHVTKGRKIYHLE CCEEEHEEECCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHCCCEEEEEC NPKSHGVFKSYDSSGKLKYEKIFDMGKAGCMKKYDANGKQTPETASCQF CCCCCCCEECCCCCCCEEHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA