Click here to switch to the map view.

The map label for this gene is spr [H]

Identifier: 117918522

GI number: 117918522

Start: 73793

End: 74272

Strand: Direct

Name: spr [H]

Synonym: Shewana3_0063

Alternate gene names: 117918522

Gene position: 73793-74272 (Clockwise)

Preceding gene: 117918521

Following gene: 117918523

Centisome position: 1.48

GC content: 49.38

Gene sequence:

>480_bases
ATGAGTTTTACGCTAATGAAACGATTACTGATAGTTATCTTAGCTTTAGGTCTTGGCGCCTGTGCGAGCGCGCCAGAACC
TAAGCCTGTGGTGAAGCAAGTTGAACCCGTATCCGTTTGGAACGATAGCAATATCGCCGATTTCCATTCCGAATGGCGCG
GCGTACCCTATCGCCTAGGTGGCGGCACTAAAAAAGGCATTGATTGCTCGGCCTTTGTGTCGGTCGCTTATCAAAAGATG
TTGGGCATGACTCTGCCGCGCACAGTAGAAGAACAGCAAGCCCTCGGCAAACCCGTGGCGCGGGACCAACTGCGTAAAGG
CGACTTAGTGTTTTTCAAAACGGGTTGGAGCACGCACCATGTTGGCATTTATGTGGGCGGGAATAATTTCCTCCATGTCT
CGACGAGCCAAGGGGTGAAAATTTCGAGTCTGCTAAATAGTTATTGGGCATCAAAGTATTGGAATGCAAGGCGAATTTAA

Upstream 100 bases:

>100_bases
GTTTTAAGCTTGGGATTAGCTTAGGCTGTTACCATCGGTTTTTTCACGATATTTTCGTTATCGCTTTGATAGCACCCATA
TTACGCAAGAATTGCCTGCG

Downstream 100 bases:

>100_bases
GCCTTAATCACAGGTGGAGACTCTATGACCCCTGCGTCTGCTTCGTCCCAACATGAGCCTCTGCCCACCTCGGTTTTTCT
GGCGATTTTTTCCGCCGTAT

Product: NLP/P60 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MSFTLMKRLLIVILALGLGACASAPEPKPVVKQVEPVSVWNDSNIADFHSEWRGVPYRLGGGTKKGIDCSAFVSVAYQKM
LGMTLPRTVEEQQALGKPVARDQLRKGDLVFFKTGWSTHHVGIYVGGNNFLHVSTSQGVKISSLLNSYWASKYWNARRI

Sequences:

>Translated_159_residues
MSFTLMKRLLIVILALGLGACASAPEPKPVVKQVEPVSVWNDSNIADFHSEWRGVPYRLGGGTKKGIDCSAFVSVAYQKM
LGMTLPRTVEEQQALGKPVARDQLRKGDLVFFKTGWSTHHVGIYVGGNNFLHVSTSQGVKISSLLNSYWASKYWNARRI
>Mature_158_residues
SFTLMKRLLIVILALGLGACASAPEPKPVVKQVEPVSVWNDSNIADFHSEWRGVPYRLGGGTKKGIDCSAFVSVAYQKML
GMTLPRTVEEQQALGKPVARDQLRKGDLVFFKTGWSTHHVGIYVGGNNFLHVSTSQGVKISSLLNSYWASKYWNARRI

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1788501, Length=174, Percent_Identity=40.8045977011494, Blast_Score=143, Evalue=5e-36,
Organism=Escherichia coli, GI1788001, Length=142, Percent_Identity=42.2535211267606, Blast_Score=122, Evalue=8e-30,
Organism=Escherichia coli, GI1787944, Length=112, Percent_Identity=41.0714285714286, Blast_Score=87, Evalue=5e-19,
Organism=Escherichia coli, GI1786421, Length=113, Percent_Identity=38.9380530973451, Blast_Score=72, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 17582; Mature: 17450

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFTLMKRLLIVILALGLGACASAPEPKPVVKQVEPVSVWNDSNIADFHSEWRGVPYRLG
CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEEECCCCCHHHHHHHCCCCEEEC
GGTKKGIDCSAFVSVAYQKMLGMTLPRTVEEQQALGKPVARDQLRKGDLVFFKTGWSTHH
CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHCCCCEEEEECCCCEEE
VGIYVGGNNFLHVSTSQGVKISSLLNSYWASKYWNARRI
EEEEECCCCEEEEECCCCEEHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SFTLMKRLLIVILALGLGACASAPEPKPVVKQVEPVSVWNDSNIADFHSEWRGVPYRLG
CHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEEECCCCCHHHHHHHCCCCEEEC
GGTKKGIDCSAFVSVAYQKMLGMTLPRTVEEQQALGKPVARDQLRKGDLVFFKTGWSTHH
CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHCCCCEEEEECCCCEEE
VGIYVGGNNFLHVSTSQGVKISSLLNSYWASKYWNARRI
EEEEECCCCEEEEECCCCEEHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]