Definition | Shewanella sp. ANA-3 plasmid 1, complete sequence. |
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Accession | NC_008573 |
Length | 278,942 |
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The map label for this gene is 117676256
Identifier: 117676256
GI number: 117676256
Start: 205173
End: 206222
Strand: Direct
Name: 117676256
Synonym: Shewana3_4317
Alternate gene names: NA
Gene position: 205173-206222 (Clockwise)
Preceding gene: 117676241
Following gene: 117676260
Centisome position: 73.55
GC content: 53.52
Gene sequence:
>1050_bases ATGGCCCGTGCCGGAGTCACTTATCACGATATCGCTAAAGCCGCTGAAGCCATTAAAACGCAAGGCCAGGAACCCACGGT GGATCGGGTGCGCGAACACCTGGGCACCGGCAGCAAAAGCACCATCGCGCCATTGCTCAAGCGTTGGCGGTCAGACAATG GGGAGGCGGCCGATGTCAGTGGGCTGCCGAACGACCTCGTCGAGGTGGTAAAGTCCCTGCATGAGCGGGTACAGCAGATG GCCGACCACCGTATCGAACAAGCTCGCCAGGAATTCGAGACTTTAAAGGAAGAACTCCGCAAAGAGTTGACCCATGCCGA CAACACCATGGCGCAACTAACTGCCCGACAACGGGACCTGGAGAACCAGACCGAACGGCTGAGCAAAGAAAAAAGCGAGC AAAGTCGGTCTCTGGAAGACGCGCGTGTCAGCCTGGCCAAGGCCGAGTCCCAGCGGGACGAAGCTGCTGCACGGATTGTT GAATTGAAGGAGAGCGTTGCGGAACTCAAACAAGAAAATAAGGATATCCGCGATCATTTCGAACATTACCAGCAGCGTAC TGCCGAAGACCGCCAGCAGGAGCGCGAACAATTCCGTTCAGTTAACCAGGGGCTGAACGATCAGATCCAGGATCTGCAAC ACCGGCTCGCCCAGGCTGAGTCGAGAGCGTCAGAGCTGTTTGACGCCAATGTGCAGTTACAACGACATGCCGATGAATTA AAACGGGCCAATGGGGCGCTAAATAGCGACGTGAAGGGAAAGATAGAAGATGTCCAGAACCTGAAACACGAGCTTGAAGA AGCCGTGGCAAAGTGCCGGGAATACCAGCATCAAAATGATCATTTGGCGCAAAACATGGCCGTGCTCACCACTCAGAAAG CTGATGTTGATAAGCAAGTGGCCGTCTTATCCCAAACACTGGAGACCACAAAAACCGAATTGAAAACCACCCAGGATAAA GCGGCGCTTCTGATCGACGAGAATAAAGTCATTCTTCAGGAAAAAGCCGTGATCCAAGGTCAATTTAAACAGCTCCAAAG TTCGCTGTAG
Upstream 100 bases:
>100_bases GTGGTTAGTATCATGAATTCAAGCGATCTTGAAACGAACTAATATAATGTTATATTACGTGTTATGTAATATGTTACTAA ATAATCCGAGAGGAATCACC
Downstream 100 bases:
>100_bases CCGGATGGATGTATTTTGAGCGCCCGGCAGCTTAATGGTGGAATCGTCGTAGCTCATCAAATTTGTCGGTTCTTCCACTT GGGGTCGTCTCAGAAAACGG
Product: chromosome segregation ATPases-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MARAGVTYHDIAKAAEAIKTQGQEPTVDRVREHLGTGSKSTIAPLLKRWRSDNGEAADVSGLPNDLVEVVKSLHERVQQM ADHRIEQARQEFETLKEELRKELTHADNTMAQLTARQRDLENQTERLSKEKSEQSRSLEDARVSLAKAESQRDEAAARIV ELKESVAELKQENKDIRDHFEHYQQRTAEDRQQEREQFRSVNQGLNDQIQDLQHRLAQAESRASELFDANVQLQRHADEL KRANGALNSDVKGKIEDVQNLKHELEEAVAKCREYQHQNDHLAQNMAVLTTQKADVDKQVAVLSQTLETTKTELKTTQDK AALLIDENKVILQEKAVIQGQFKQLQSSL
Sequences:
>Translated_349_residues MARAGVTYHDIAKAAEAIKTQGQEPTVDRVREHLGTGSKSTIAPLLKRWRSDNGEAADVSGLPNDLVEVVKSLHERVQQM ADHRIEQARQEFETLKEELRKELTHADNTMAQLTARQRDLENQTERLSKEKSEQSRSLEDARVSLAKAESQRDEAAARIV ELKESVAELKQENKDIRDHFEHYQQRTAEDRQQEREQFRSVNQGLNDQIQDLQHRLAQAESRASELFDANVQLQRHADEL KRANGALNSDVKGKIEDVQNLKHELEEAVAKCREYQHQNDHLAQNMAVLTTQKADVDKQVAVLSQTLETTKTELKTTQDK AALLIDENKVILQEKAVIQGQFKQLQSSL >Mature_348_residues ARAGVTYHDIAKAAEAIKTQGQEPTVDRVREHLGTGSKSTIAPLLKRWRSDNGEAADVSGLPNDLVEVVKSLHERVQQMA DHRIEQARQEFETLKEELRKELTHADNTMAQLTARQRDLENQTERLSKEKSEQSRSLEDARVSLAKAESQRDEAAARIVE LKESVAELKQENKDIRDHFEHYQQRTAEDRQQEREQFRSVNQGLNDQIQDLQHRLAQAESRASELFDANVQLQRHADELK RANGALNSDVKGKIEDVQNLKHELEEAVAKCREYQHQNDHLAQNMAVLTTQKADVDKQVAVLSQTLETTKTELKTTQDKA ALLIDENKVILQEKAVIQGQFKQLQSSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39758; Mature: 39626
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARAGVTYHDIAKAAEAIKTQGQEPTVDRVREHLGTGSKSTIAPLLKRWRSDNGEAADVS CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCC GLPNDLVEVVKSLHERVQQMADHRIEQARQEFETLKEELRKELTHADNTMAQLTARQRDL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENQTERLSKEKSEQSRSLEDARVSLAKAESQRDEAAARIVELKESVAELKQENKDIRDHF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH EHYQQRTAEDRQQEREQFRSVNQGLNDQIQDLQHRLAQAESRASELFDANVQLQRHADEL HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH KRANGALNSDVKGKIEDVQNLKHELEEAVAKCREYQHQNDHLAQNMAVLTTQKADVDKQV HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHH AVLSQTLETTKTELKTTQDKAALLIDENKVILQEKAVIQGQFKQLQSSL HHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ARAGVTYHDIAKAAEAIKTQGQEPTVDRVREHLGTGSKSTIAPLLKRWRSDNGEAADVS CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCC GLPNDLVEVVKSLHERVQQMADHRIEQARQEFETLKEELRKELTHADNTMAQLTARQRDL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENQTERLSKEKSEQSRSLEDARVSLAKAESQRDEAAARIVELKESVAELKQENKDIRDHF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH EHYQQRTAEDRQQEREQFRSVNQGLNDQIQDLQHRLAQAESRASELFDANVQLQRHADEL HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH KRANGALNSDVKGKIEDVQNLKHELEEAVAKCREYQHQNDHLAQNMAVLTTQKADVDKQV HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHH AVLSQTLETTKTELKTTQDKAALLIDENKVILQEKAVIQGQFKQLQSSL HHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA